==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 29-OCT-08 3F27 . COMPND 2 MOLECULE: DNA (5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR P.PALASINGAM,R.JAUCH,C.K.L.NG,P.R.KOLATKAR . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6564.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 68.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 58.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 68 D I 0 0 135 0, 0.0 2,-0.4 0, 0.0 64,-0.0 0.000 360.0 360.0 360.0 125.4 11.4 -20.7 -4.8 2 69 D R - 0 0 219 1,-0.1 68,-0.0 68,-0.0 0, 0.0 -0.770 360.0-105.2 -96.4 134.5 12.8 -17.2 -4.2 3 70 D R - 0 0 153 -2,-0.4 2,-0.2 1,-0.1 -1,-0.1 -0.020 42.8-101.5 -41.1 152.4 12.6 -15.5 -0.8 4 71 D P - 0 0 43 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.512 42.0 -97.9 -82.2 152.6 10.0 -12.7 -0.4 5 72 D M - 0 0 70 -2,-0.2 53,-0.2 4,-0.1 2,-0.1 -0.465 34.3-140.5 -76.7 135.9 11.1 -9.1 -0.5 6 73 D N > - 0 0 92 -2,-0.2 4,-2.6 51,-0.1 5,-0.2 -0.350 37.8 -86.0 -83.5 175.1 11.7 -7.3 2.7 7 74 D A H > S+ 0 0 22 2,-0.2 4,-1.8 1,-0.2 5,-0.2 0.836 128.8 46.7 -42.8 -46.1 10.7 -3.7 3.3 8 75 D F H >> S+ 0 0 55 2,-0.2 4,-3.6 1,-0.2 3,-0.8 0.994 109.8 51.3 -68.1 -59.1 13.9 -2.4 1.9 9 76 D M H 3> S+ 0 0 84 1,-0.3 4,-3.4 2,-0.2 -2,-0.2 0.864 110.4 50.9 -46.0 -42.7 13.8 -4.5 -1.2 10 77 D V H 3X S+ 0 0 4 -4,-2.6 4,-0.9 2,-0.2 -1,-0.3 0.884 117.1 38.5 -62.3 -42.5 10.2 -3.3 -1.9 11 78 D W H XX S+ 0 0 18 -4,-1.8 4,-2.0 -3,-0.8 3,-0.5 0.927 118.6 48.8 -73.2 -49.6 11.1 0.3 -1.6 12 79 D A H 3X S+ 0 0 1 -4,-3.6 4,-3.2 1,-0.2 5,-0.4 0.902 97.4 72.2 -53.7 -50.1 14.5 -0.2 -3.3 13 80 D K H 3X S+ 0 0 133 -4,-3.4 4,-0.6 -5,-0.4 -1,-0.2 0.852 114.2 22.6 -35.4 -54.9 12.8 -2.1 -6.1 14 81 D D H XX S+ 0 0 90 -4,-0.9 4,-1.9 -3,-0.5 3,-1.9 0.976 119.6 57.8 -81.6 -63.6 11.3 1.2 -7.4 15 82 D E H 3X S+ 0 0 32 -4,-2.0 4,-4.0 1,-0.3 5,-0.2 0.723 103.1 55.4 -35.7 -38.5 13.6 3.8 -6.0 16 83 D R H 3X S+ 0 0 67 -4,-3.2 4,-2.8 2,-0.2 -1,-0.3 0.918 108.4 47.5 -65.1 -41.6 16.6 2.2 -7.7 17 84 D K H X S+ 0 0 112 -4,-1.9 4,-2.1 1,-0.2 3,-1.7 0.991 112.9 44.7 -67.8 -59.0 14.1 6.0 -10.0 19 86 D L H 3X S+ 0 0 20 -4,-4.0 4,-1.8 1,-0.3 -2,-0.2 0.818 109.8 57.1 -53.6 -36.7 17.6 6.8 -9.0 20 87 D A H 3< S+ 0 0 38 -4,-2.8 -1,-0.3 -5,-0.2 -2,-0.2 0.718 108.0 47.7 -67.7 -22.7 18.9 5.2 -12.2 21 88 D Q H << S+ 0 0 115 -3,-1.7 -2,-0.2 -4,-0.9 -1,-0.2 0.894 115.0 42.9 -84.1 -45.4 16.8 7.5 -14.3 22 89 D Q H < S+ 0 0 132 -4,-2.1 -2,-0.2 1,-0.3 -3,-0.2 0.772 131.5 29.5 -70.2 -25.9 17.8 10.7 -12.5 23 90 D N < + 0 0 41 -4,-1.8 3,-0.4 -5,-0.3 -1,-0.3 -0.524 59.7 157.5-134.9 72.7 21.4 9.2 -12.6 24 91 D P S S+ 0 0 102 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.739 80.0 64.9 -60.5 -20.0 22.1 6.9 -15.7 25 92 D D S S+ 0 0 122 -3,-0.1 -2,-0.1 -4,-0.1 -5,-0.1 0.938 82.3 87.0 -65.0 -53.0 25.7 7.9 -14.9 26 93 D L S S- 0 0 58 -3,-0.4 -3,-0.1 -7,-0.2 0, 0.0 -0.173 78.1-121.2 -64.8 138.5 26.1 6.2 -11.5 27 94 D H > - 0 0 138 1,-0.1 4,-1.9 4,-0.0 -1,-0.1 -0.219 27.4-110.1 -70.5 168.9 27.1 2.6 -11.2 28 95 D N H > S+ 0 0 79 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.897 116.5 60.1 -71.8 -45.0 24.7 0.2 -9.4 29 96 D A H > S+ 0 0 56 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.923 108.3 47.8 -43.9 -46.9 26.9 -0.2 -6.4 30 97 D E H > S+ 0 0 85 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.937 106.3 54.8 -66.8 -47.8 26.6 3.5 -5.9 31 98 D L H X S+ 0 0 6 -4,-1.9 4,-2.6 1,-0.2 -1,-0.2 0.922 109.0 50.9 -43.1 -47.8 22.8 3.3 -6.4 32 99 D S H X S+ 0 0 52 -4,-3.0 4,-2.1 1,-0.2 -2,-0.2 0.897 107.9 50.8 -62.8 -40.6 23.0 0.7 -3.5 33 100 D K H X S+ 0 0 140 -4,-2.2 4,-2.3 -5,-0.2 -1,-0.2 0.915 113.8 45.7 -61.7 -40.9 25.0 3.1 -1.3 34 101 D M H X S+ 0 0 52 -4,-2.7 4,-2.6 2,-0.2 5,-0.2 0.875 110.3 51.0 -70.1 -42.6 22.5 5.9 -1.8 35 102 D L H X S+ 0 0 0 -4,-2.6 4,-1.6 -5,-0.2 -1,-0.2 0.932 111.9 50.6 -60.3 -40.2 19.4 3.7 -1.3 36 103 D G H X S+ 0 0 34 -4,-2.1 4,-1.8 -5,-0.2 3,-0.4 0.951 110.9 47.7 -62.1 -49.7 21.0 2.6 1.9 37 104 D K H X S+ 0 0 153 -4,-2.3 4,-1.0 1,-0.2 -1,-0.2 0.887 115.4 42.6 -58.4 -44.9 21.7 6.2 3.0 38 105 D S H X S+ 0 0 45 -4,-2.6 4,-0.9 2,-0.2 -1,-0.2 0.622 106.2 61.9 -87.7 -10.7 18.2 7.5 2.3 39 106 D W H >< S+ 0 0 49 -4,-1.6 3,-0.6 -3,-0.4 -1,-0.2 0.943 105.4 48.0 -67.8 -51.2 16.5 4.5 3.8 40 107 D K H 3< S+ 0 0 182 -4,-1.8 -2,-0.2 1,-0.3 -1,-0.2 0.786 111.4 51.2 -57.3 -32.7 18.1 5.4 7.2 41 108 D A H 3< S+ 0 0 76 -4,-1.0 -1,-0.3 -5,-0.2 2,-0.2 0.748 89.5 96.9 -77.5 -24.1 16.9 9.0 6.6 42 109 D L S << S- 0 0 40 -4,-0.9 -3,-0.0 -3,-0.6 5,-0.0 -0.503 81.5-123.9 -66.8 128.6 13.4 7.8 5.9 43 110 D T > - 0 0 81 -2,-0.2 4,-3.0 1,-0.1 5,-0.2 -0.284 19.0-112.2 -67.5 155.6 11.3 8.0 9.1 44 111 D L H > S+ 0 0 142 2,-0.2 4,-2.0 1,-0.2 -1,-0.1 0.912 122.3 50.9 -56.5 -43.2 9.6 4.9 10.5 45 112 D A H 4 S+ 0 0 56 2,-0.2 -1,-0.2 1,-0.2 3,-0.1 0.922 110.7 50.4 -57.2 -42.0 6.2 6.5 9.7 46 113 D E H 4 S+ 0 0 109 1,-0.2 4,-0.2 2,-0.2 -2,-0.2 0.933 111.7 46.6 -63.0 -46.9 7.6 7.1 6.2 47 114 D K H >X S+ 0 0 36 -4,-3.0 3,-2.2 1,-0.2 4,-1.5 0.776 90.4 90.7 -64.3 -28.4 8.7 3.5 5.8 48 115 D R H 3X S+ 0 0 129 -4,-2.0 4,-2.8 1,-0.3 5,-0.2 0.799 78.9 54.6 -40.0 -52.6 5.4 2.1 7.1 49 116 D P H 3> S+ 0 0 56 0, 0.0 4,-1.5 0, 0.0 -1,-0.3 0.763 111.0 49.7 -63.3 -17.9 3.5 1.7 3.8 50 117 D F H <> S+ 0 0 55 -3,-2.2 4,-3.8 -4,-0.2 5,-0.2 0.921 106.4 51.4 -83.6 -45.2 6.4 -0.4 2.6 51 118 D V H X S+ 0 0 75 -4,-1.5 4,-1.6 1,-0.2 5,-0.1 0.925 111.3 51.9 -52.8 -42.7 6.5 -2.6 5.6 52 119 D E H X S+ 0 0 100 -4,-2.8 4,-2.0 1,-0.2 3,-0.3 0.922 110.9 45.8 -65.8 -41.0 2.8 -3.1 4.9 53 120 D E H X S+ 0 0 68 -4,-1.5 4,-2.3 -5,-0.2 -2,-0.2 0.939 107.8 56.0 -64.6 -46.4 3.6 -4.0 1.3 54 121 D A H X S+ 0 0 13 -4,-3.8 4,-1.8 1,-0.2 -1,-0.2 0.793 109.6 49.9 -54.4 -27.9 6.4 -6.4 2.3 55 122 D E H X S+ 0 0 86 -4,-1.6 4,-3.6 -3,-0.3 5,-0.3 0.882 104.0 53.9 -79.2 -45.9 3.7 -8.1 4.5 56 123 D R H X S+ 0 0 140 -4,-2.0 4,-3.2 1,-0.2 -2,-0.2 0.954 113.6 47.1 -49.2 -48.8 1.1 -8.5 1.8 57 124 D L H X S+ 0 0 56 -4,-2.3 4,-3.2 2,-0.2 -2,-0.2 0.910 111.0 49.0 -56.5 -49.0 3.9 -10.1 -0.1 58 125 D R H X S+ 0 0 94 -4,-1.8 4,-2.2 1,-0.2 -2,-0.2 0.901 115.1 45.4 -64.4 -40.4 5.0 -12.4 2.8 59 126 D V H X S+ 0 0 66 -4,-3.6 4,-1.6 2,-0.2 -2,-0.2 0.961 113.7 48.4 -62.3 -51.0 1.4 -13.4 3.3 60 127 D Q H X S+ 0 0 98 -4,-3.2 4,-2.6 -5,-0.3 3,-0.3 0.897 109.6 53.1 -58.6 -46.3 0.8 -14.0 -0.4 61 128 D H H X S+ 0 0 26 -4,-3.2 4,-2.8 1,-0.2 -1,-0.3 0.925 103.2 58.2 -48.4 -51.3 4.0 -16.0 -0.6 62 129 D M H < S+ 0 0 111 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.881 109.3 44.7 -49.3 -44.5 2.6 -18.1 2.3 63 130 D Q H < S+ 0 0 144 -4,-1.6 -2,-0.2 -3,-0.3 -1,-0.2 0.964 113.0 49.1 -65.5 -52.8 -0.4 -19.0 0.1 64 131 D D H < S+ 0 0 98 -4,-2.6 -2,-0.2 1,-0.3 -1,-0.2 0.849 126.2 24.4 -59.2 -35.6 1.6 -19.7 -3.1 65 132 D H >< + 0 0 80 -4,-2.8 3,-0.6 -5,-0.2 -1,-0.3 -0.806 59.4 166.5-138.6 96.0 4.0 -22.0 -1.3 66 133 D P T 3 S+ 0 0 107 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.924 81.1 50.7 -69.8 -45.3 2.9 -23.7 2.0 67 134 D N T 3 S+ 0 0 157 2,-0.0 2,-0.5 0, 0.0 -5,-0.0 0.255 79.6 133.9 -83.1 10.9 5.8 -26.2 2.1 68 135 D Y < - 0 0 54 -3,-0.6 2,-0.5 -6,-0.1 -3,-0.1 -0.477 29.4-179.3 -71.5 114.1 8.6 -23.6 1.7 69 136 D K - 0 0 151 -2,-0.5 2,-0.6 2,-0.0 -2,-0.0 -0.964 37.0-116.5-104.3 131.8 11.6 -23.8 4.0 70 137 D Y - 0 0 114 -2,-0.5 -68,-0.0 1,-0.1 -2,-0.0 -0.573 38.1-168.9 -66.3 112.9 14.2 -21.1 3.4 71 138 D R + 0 0 192 -2,-0.6 -1,-0.1 0, 0.0 -2,-0.0 -0.868 7.4 179.7-117.3 99.0 17.2 -23.2 2.3 72 139 D P - 0 0 77 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.003 13.4-140.3 -80.2-168.0 20.6 -21.4 2.1 73 140 D R 0 0 211 1,-0.1 0, 0.0 -2,-0.0 0, 0.0 -0.710 360.0 360.0-141.1-172.9 24.0 -22.9 1.1 74 141 D R 0 0 296 -2,-0.2 -1,-0.1 0, 0.0 0, 0.0 0.259 360.0 360.0-166.1 360.0 27.8 -23.0 1.9