==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-DEC-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 07-MAY-12 4F26 . COMPND 2 MOLECULE: POLYADENYLATE-BINDING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.KOZLOV,N.SAFAEE,K.GEHRING . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4796.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 67.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 31.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 99 A G 0 0 24 0, 0.0 46,-3.0 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 71.5 -17.0 25.3 -5.0 2 100 A N E -A 46 0A 27 73,-0.5 73,-2.1 44,-0.2 2,-0.3 -0.869 360.0-173.0-111.5 137.7 -14.3 22.7 -4.3 3 101 A I E -AB 45 74A 0 42,-2.6 42,-2.4 -2,-0.4 2,-0.3 -0.947 16.0-144.4-126.1 148.2 -14.7 19.2 -2.9 4 102 A F E -AB 44 73A 53 69,-2.3 69,-1.3 -2,-0.3 2,-0.4 -0.771 12.0-160.5 -98.3 149.8 -12.5 16.4 -1.7 5 103 A I E -AB 43 72A 0 38,-2.4 38,-2.2 -2,-0.3 2,-0.3 -0.966 14.8-176.4-132.5 117.8 -13.5 12.8 -2.3 6 104 A K E +AB 42 71A 97 65,-2.9 65,-2.4 -2,-0.4 36,-0.2 -0.797 57.8 38.2-117.9 165.7 -11.8 10.1 -0.1 7 105 A N S S+ 0 0 63 34,-0.9 2,-0.3 -2,-0.3 35,-0.2 0.834 76.7 174.4 60.3 40.3 -11.9 6.4 0.1 8 106 A L - 0 0 0 33,-2.9 -1,-0.2 -3,-0.3 2,-0.1 -0.603 38.4-110.4 -75.4 132.4 -12.0 6.3 -3.7 9 107 A D > - 0 0 22 56,-0.3 3,-2.1 -2,-0.3 32,-0.1 -0.390 27.6-123.2 -58.7 137.9 -11.8 2.8 -5.2 10 108 A K T 3 S+ 0 0 111 1,-0.3 29,-0.4 -2,-0.1 -1,-0.1 0.675 106.8 67.1 -72.3 -11.3 -8.5 2.6 -6.9 11 109 A S T 3 S+ 0 0 84 2,-0.0 2,-0.6 30,-0.0 -1,-0.3 0.518 76.9 104.8 -78.9 -3.3 -10.1 1.7 -10.3 12 110 A I < - 0 0 6 -3,-2.1 2,-0.2 4,-0.1 29,-0.2 -0.682 51.3-180.0 -84.8 117.8 -11.6 5.2 -10.5 13 111 A D > - 0 0 65 -2,-0.6 4,-2.8 26,-0.0 3,-0.3 -0.520 45.2 -85.1-103.5 178.8 -9.6 7.4 -12.9 14 112 A N H > S+ 0 0 78 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.878 126.3 49.4 -51.1 -47.6 -10.1 11.0 -14.0 15 113 A K H > S+ 0 0 157 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.869 113.1 46.9 -65.7 -35.4 -12.7 10.3 -16.6 16 114 A A H > S+ 0 0 34 -3,-0.3 4,-1.8 2,-0.2 5,-0.2 0.938 111.0 51.7 -69.6 -46.5 -14.8 8.1 -14.2 17 115 A L H X S+ 0 0 0 -4,-2.8 4,-2.4 1,-0.2 5,-0.2 0.937 112.5 46.8 -54.4 -47.8 -14.5 10.8 -11.4 18 116 A Y H X S+ 0 0 109 -4,-2.6 4,-2.4 -5,-0.2 -1,-0.2 0.933 108.0 56.1 -57.9 -46.6 -15.8 13.4 -13.8 19 117 A D H < S+ 0 0 122 -4,-1.9 -1,-0.2 -5,-0.2 4,-0.2 0.845 113.1 40.7 -55.0 -40.6 -18.6 11.2 -15.1 20 118 A T H >< S+ 0 0 39 -4,-1.8 3,-0.9 -3,-0.2 -1,-0.2 0.927 121.0 40.1 -73.5 -52.2 -20.0 10.7 -11.6 21 119 A F H >< S+ 0 0 0 -4,-2.4 3,-1.5 1,-0.2 4,-0.4 0.661 96.3 76.9 -80.2 -14.7 -19.6 14.3 -10.3 22 120 A S T 3< S+ 0 0 44 -4,-2.4 3,-0.4 1,-0.3 -1,-0.2 0.651 80.3 74.2 -71.4 -13.5 -20.6 16.1 -13.5 23 121 A A T < S+ 0 0 82 -3,-0.9 -1,-0.3 -4,-0.2 -2,-0.2 0.842 96.8 49.7 -59.1 -31.6 -24.2 15.2 -12.6 24 122 A F S < S- 0 0 24 -3,-1.5 2,-0.3 -4,-0.2 -1,-0.2 0.630 121.3 -39.2 -89.1 -18.3 -24.0 18.0 -9.8 25 123 A G S S- 0 0 23 -4,-0.4 2,-0.8 -3,-0.4 -1,-0.1 -0.977 81.7 -46.5 172.8-179.7 -22.7 21.0 -11.5 26 124 A N - 0 0 77 -2,-0.3 22,-2.3 -3,-0.1 2,-0.6 -0.758 53.6-148.4 -82.7 112.4 -20.3 22.4 -14.0 27 125 A I E +C 47 0A 10 -2,-0.8 20,-0.2 20,-0.2 3,-0.1 -0.686 20.7 177.8 -87.7 118.6 -16.8 20.8 -13.4 28 126 A L E S- 0 0 93 18,-3.0 2,-0.3 -2,-0.6 -1,-0.2 0.858 71.0 -8.3 -81.8 -41.4 -13.9 23.0 -14.2 29 127 A S E +C 46 0A 69 17,-1.3 17,-3.5 2,-0.0 -1,-0.4 -0.991 61.3 175.1-154.4 148.2 -11.3 20.5 -13.1 30 128 A C E +C 45 0A 21 -2,-0.3 2,-0.3 15,-0.2 15,-0.2 -0.967 5.1 179.8-150.1 154.8 -11.0 17.3 -11.3 31 129 A K E -C 44 0A 105 13,-2.1 13,-2.5 -2,-0.3 2,-0.5 -0.972 27.4-139.6-155.7 146.9 -8.3 14.8 -10.5 32 130 A V E -C 43 0A 8 -2,-0.3 2,-0.3 11,-0.3 11,-0.3 -0.937 38.5-125.7 -96.3 122.1 -7.6 11.5 -8.8 33 131 A V E - 0 0 20 9,-2.3 7,-2.8 -2,-0.5 9,-0.5 -0.598 38.9-179.7 -72.3 130.4 -4.3 11.9 -7.0 34 132 A C E +C 39 0A 82 -2,-0.3 5,-0.2 5,-0.3 2,-0.2 -0.863 17.2 178.8-129.6 165.7 -1.8 9.2 -8.1 35 133 A D E > -C 38 0A 59 3,-2.3 3,-2.3 -2,-0.3 5,-0.0 -0.697 59.8 -61.0-145.6-163.4 1.7 8.0 -7.3 36 134 A E T 3 S+ 0 0 164 1,-0.3 3,-0.1 -2,-0.2 -2,-0.0 0.567 134.7 52.0 -71.5 -9.5 4.0 5.2 -8.6 37 135 A N T 3 S- 0 0 143 1,-0.4 2,-0.3 0, 0.0 -1,-0.3 0.284 116.6-114.3-106.7 6.4 1.5 2.6 -7.2 38 136 A G E < S+ C 0 35A 32 -3,-2.3 -3,-2.3 2,-0.0 -1,-0.4 -0.735 76.0 20.2 106.8-146.0 -1.5 4.2 -9.0 39 137 A S E - C 0 34A 15 -29,-0.4 -5,-0.3 -2,-0.3 -29,-0.1 -0.294 55.5-150.1 -58.9 138.6 -4.4 5.9 -7.4 40 138 A K E - 0 0 83 -7,-2.8 -33,-0.2 2,-0.3 -1,-0.1 0.401 47.7-108.5 -88.9 -0.3 -4.0 7.1 -3.9 41 139 A G E S+ 0 0 7 -8,-0.4 -33,-2.9 1,-0.3 -34,-0.9 0.705 88.6 83.9 84.2 17.3 -7.7 6.6 -3.3 42 140 A Y E +A 6 0A 77 -9,-0.5 -9,-2.3 -36,-0.2 -2,-0.3 -0.974 48.1 174.5-148.5 164.6 -8.7 10.2 -3.2 43 141 A G E -AC 5 32A 1 -38,-2.2 -38,-2.4 -2,-0.3 2,-0.3 -0.904 19.5-129.1-160.0 172.4 -9.5 13.0 -5.6 44 142 A F E -AC 4 31A 45 -13,-2.5 -13,-2.1 -2,-0.3 2,-0.4 -0.994 9.6-161.6-137.8 144.9 -10.7 16.6 -5.9 45 143 A V E -AC 3 30A 0 -42,-2.4 -42,-2.6 -2,-0.3 2,-0.7 -0.996 6.0-156.4-130.1 131.8 -13.4 18.2 -7.9 46 144 A H E -AC 2 29A 63 -17,-3.5 -18,-3.0 -2,-0.4 -17,-1.3 -0.919 15.9-166.7-106.9 106.7 -13.6 21.9 -8.7 47 145 A F E - C 0 27A 0 -46,-3.0 -20,-0.2 -2,-0.7 -25,-0.0 -0.564 29.0-126.3 -86.8 153.4 -17.2 23.1 -9.5 48 146 A E S S+ 0 0 121 -22,-2.3 2,-0.3 -2,-0.2 -1,-0.1 0.897 94.0 37.0 -62.0 -39.3 -18.0 26.4 -11.0 49 147 A T S > S- 0 0 50 -23,-0.2 4,-1.4 -48,-0.1 -2,-0.1 -0.836 70.9-132.7-122.4 156.2 -20.4 27.1 -8.1 50 148 A Q H > S+ 0 0 106 -2,-0.3 4,-2.2 1,-0.2 5,-0.2 0.828 107.2 60.9 -66.8 -36.2 -20.7 26.5 -4.4 51 149 A E H > S+ 0 0 113 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.855 102.9 51.6 -61.4 -38.4 -24.2 25.2 -4.7 52 150 A A H > S+ 0 0 0 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.936 107.9 51.9 -64.9 -46.6 -23.0 22.4 -7.0 53 151 A A H X S+ 0 0 0 -4,-1.4 4,-2.0 1,-0.2 -2,-0.2 0.870 110.8 47.6 -54.4 -44.0 -20.3 21.4 -4.4 54 152 A E H X S+ 0 0 83 -4,-2.2 4,-3.0 2,-0.2 -1,-0.2 0.889 109.5 52.5 -72.2 -37.7 -23.0 21.2 -1.6 55 153 A R H X S+ 0 0 111 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.877 109.6 51.1 -56.2 -43.8 -25.3 19.1 -3.9 56 154 A A H X S+ 0 0 0 -4,-2.2 4,-2.6 2,-0.2 5,-0.4 0.911 111.5 45.4 -64.9 -44.1 -22.4 16.8 -4.4 57 155 A I H X S+ 0 0 28 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.959 113.7 51.1 -62.8 -48.0 -21.7 16.4 -0.7 58 156 A E H < S+ 0 0 167 -4,-3.0 -2,-0.2 1,-0.2 -1,-0.2 0.840 121.1 32.8 -54.1 -44.6 -25.5 16.0 -0.0 59 157 A K H < S+ 0 0 144 -4,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.785 128.7 32.1 -85.5 -35.4 -25.9 13.2 -2.6 60 158 A M H >< S+ 0 0 23 -4,-2.6 3,-2.1 -5,-0.2 10,-0.4 0.714 81.5 104.6-103.9 -26.8 -22.4 11.5 -2.5 61 159 A N T 3< S+ 0 0 81 -4,-2.2 10,-0.2 -5,-0.4 3,-0.1 -0.381 101.1 5.5 -60.4 125.3 -21.0 11.6 1.1 62 160 A G T 3 S+ 0 0 36 8,-3.2 -1,-0.3 1,-0.3 2,-0.2 0.457 105.6 123.9 78.4 -0.1 -21.4 8.2 2.7 63 161 A M < - 0 0 108 -3,-2.1 7,-2.3 7,-0.3 -1,-0.3 -0.632 68.4-102.2 -90.0 150.5 -22.7 6.7 -0.6 64 162 A L E -D 69 0B 101 5,-0.3 2,-0.4 -2,-0.2 5,-0.3 -0.473 31.1-174.3 -63.6 132.5 -21.2 3.7 -2.4 65 163 A L E > -D 68 0B 14 3,-3.1 3,-1.4 -2,-0.2 -56,-0.3 -0.938 68.5 -47.9-128.7 110.9 -19.1 4.5 -5.4 66 164 A N T 3 S- 0 0 90 -2,-0.4 -58,-0.0 1,-0.2 -2,-0.0 -0.474 127.2 -15.1 59.0-122.7 -18.2 1.2 -7.0 67 165 A D T 3 S+ 0 0 139 -2,-0.3 2,-0.3 -3,-0.1 -1,-0.2 0.222 126.9 57.1-103.6 21.3 -17.0 -1.0 -4.2 68 166 A R E < S-D 65 0B 82 -3,-1.4 -3,-3.1 -5,-0.1 2,-0.5 -0.996 76.9-116.3-142.6 149.6 -16.4 1.6 -1.4 69 167 A K E -D 64 0B 120 -2,-0.3 -5,-0.3 -5,-0.3 2,-0.2 -0.735 40.3-141.8 -80.5 126.7 -18.4 4.2 0.5 70 168 A V - 0 0 1 -7,-2.3 -8,-3.2 -2,-0.5 2,-0.5 -0.559 5.8-137.3 -95.0 154.8 -16.8 7.6 -0.2 71 169 A F E -B 6 0A 122 -65,-2.4 -65,-2.9 -10,-0.2 2,-0.4 -0.954 26.6-177.6-108.1 121.7 -16.2 10.6 2.0 72 170 A V E +B 5 0A 4 -2,-0.5 2,-0.3 -67,-0.2 -67,-0.2 -0.990 14.7 137.3-128.5 130.2 -17.1 13.9 0.3 73 171 A G E -B 4 0A 12 -69,-1.3 -69,-2.3 -2,-0.4 2,-0.3 -0.923 52.2 -66.9-155.8-178.4 -16.7 17.4 1.9 74 172 A R E -B 3 0A 91 -2,-0.3 2,-0.3 -71,-0.2 -71,-0.3 -0.569 42.7-168.8 -85.1 141.8 -15.6 21.0 1.2 75 173 A F - 0 0 85 -73,-2.1 2,-0.6 -2,-0.3 -73,-0.5 -0.884 20.3-133.9-123.7 150.2 -12.0 21.8 0.5 76 174 A K 0 0 205 -2,-0.3 -73,-0.0 -75,-0.1 -2,-0.0 -0.947 360.0 360.0-107.8 110.9 -10.1 25.1 0.3 77 175 A S 0 0 121 -2,-0.6 -75,-0.0 -75,-0.0 -31,-0.0 -0.426 360.0 360.0 -71.5 360.0 -7.9 25.1 -2.9