==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TOXIN 12-JUN-00 1F53 . COMPND 2 MOLECULE: YEAST KILLER TOXIN-LIKE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP.; . AUTHOR S.OHKI,E.KARIYA,K.HIRAGA,A.WAKAMIYA,T.ISOBE,K.ODA,M.KAINOSHO . 84 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5117.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 69.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 34.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 21.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 40 0, 0.0 2,-0.3 0, 0.0 30,-0.2 0.000 360.0 360.0 360.0 173.5 55.0 -0.5 1.7 2 2 A D - 0 0 78 28,-0.2 27,-1.4 30,-0.1 2,-0.6 -0.982 360.0-101.0-158.5 166.6 53.8 -2.6 -1.2 3 3 A H B +A 28 0A 177 25,-0.3 25,-0.2 -2,-0.3 27,-0.0 -0.841 53.2 142.0-100.0 120.4 54.9 -5.2 -3.8 4 4 A V - 0 0 23 23,-1.7 2,-2.8 -2,-0.6 9,-0.1 -0.917 53.6-128.3-159.9 130.4 55.8 -3.9 -7.2 5 5 A P > - 0 0 123 0, 0.0 3,-0.6 0, 0.0 23,-0.1 -0.276 70.0 -84.1 -73.7 57.0 58.5 -4.7 -9.8 6 6 A a T 3 - 0 0 27 -2,-2.8 2,-1.0 7,-0.3 6,-0.2 0.292 51.8 -82.5 57.5 160.5 59.5 -1.0 -10.1 7 7 A R T 3 S- 0 0 149 4,-0.3 -1,-0.2 1,-0.1 3,-0.1 -0.362 87.0 -63.0 -94.2 57.7 57.6 1.3 -12.4 8 8 A G S < S- 0 0 85 -2,-1.0 -1,-0.1 -3,-0.6 -2,-0.1 0.441 101.0 -56.8 80.6 -4.6 59.5 0.3 -15.6 9 9 A G S S+ 0 0 51 -4,-0.1 -1,-0.2 2,-0.0 -3,-0.1 0.752 130.1 78.9 103.5 32.7 62.7 1.7 -14.0 10 10 A E S S+ 0 0 170 -3,-0.1 2,-0.3 37,-0.0 -2,-0.1 0.001 95.6 4.6-161.1 41.5 61.6 5.3 -13.3 11 11 A N S S+ 0 0 72 34,-0.1 -4,-0.3 1,-0.0 36,-0.3 -0.960 82.3 74.8 171.1-153.3 59.4 5.4 -10.1 12 12 A F S S- 0 0 57 -2,-0.3 2,-0.5 -6,-0.2 35,-0.4 0.101 93.2 -62.0 44.5-170.3 58.1 3.1 -7.3 13 13 A L E -B 28 0A 0 15,-1.8 15,-1.1 33,-0.1 2,-0.4 -0.915 53.5-177.9-111.8 130.0 60.6 2.2 -4.6 14 14 A K E -BC 27 45A 42 31,-1.9 31,-5.2 -2,-0.5 2,-0.4 -0.981 1.0-177.7-128.3 130.6 63.8 0.2 -5.5 15 15 A I E -BC 26 44A 0 11,-3.7 11,-3.0 -2,-0.4 2,-0.8 -0.981 22.4-137.4-128.6 137.0 66.5 -0.9 -3.0 16 16 A W E -BC 25 43A 51 27,-4.5 27,-1.4 -2,-0.4 26,-1.3 -0.783 26.6-178.1 -93.7 109.5 69.7 -2.8 -3.7 17 17 A S E -BC 24 42A 5 7,-3.1 7,-1.3 -2,-0.8 2,-0.5 -0.913 5.5-170.1-110.2 125.7 70.1 -5.5 -1.1 18 18 A H E +BC 23 41A 76 23,-1.0 23,-0.9 -2,-0.5 2,-0.3 -0.944 32.0 105.0-116.9 127.8 73.2 -7.7 -1.1 19 19 A S + 0 0 11 3,-0.9 3,-0.1 -2,-0.5 21,-0.1 -0.960 67.0 3.7 177.3 166.8 73.6 -10.8 1.1 20 20 A G S S+ 0 0 73 -2,-0.3 3,-0.1 1,-0.2 20,-0.0 -0.132 130.1 19.1 42.0-118.0 73.5 -14.7 1.2 21 21 A G S S- 0 0 78 1,-0.1 2,-0.2 -3,-0.0 -1,-0.2 0.888 124.1 -65.7 -41.6 -95.0 73.0 -15.6 -2.5 22 22 A Q - 0 0 137 -3,-0.1 -3,-0.9 1,-0.1 -1,-0.1 -0.784 67.1 -49.1-147.6-168.4 74.2 -12.4 -4.3 23 23 A Q E + B 0 18A 113 -2,-0.2 2,-0.2 -5,-0.2 -5,-0.2 -0.335 56.1 163.4 -69.7 153.9 73.2 -8.8 -4.8 24 24 A S E - B 0 17A 75 -7,-1.3 -7,-3.1 2,-0.0 2,-0.6 -0.835 33.8-130.0-171.6 130.0 69.6 -8.0 -5.8 25 25 A V E - B 0 16A 52 -9,-0.3 -9,-0.3 -2,-0.2 2,-0.3 -0.751 22.4-150.3 -90.4 122.8 67.5 -4.8 -5.8 26 26 A D E - B 0 15A 79 -11,-3.0 -11,-3.7 -2,-0.6 2,-0.5 -0.660 8.5-159.1 -89.1 143.8 64.1 -5.2 -4.1 27 27 A a E + B 0 14A 17 -2,-0.3 -23,-1.7 -13,-0.3 -13,-0.2 -0.944 20.8 155.2-128.7 118.4 61.2 -3.1 -5.3 28 28 A Y E -AB 3 13A 3 -15,-1.1 -15,-1.8 -2,-0.5 2,-0.3 -0.453 28.6-122.0-122.1-164.1 58.0 -2.3 -3.2 29 29 A A + 0 0 0 -27,-1.4 20,-0.0 -17,-0.2 -25,-0.0 -0.963 57.4 8.3-144.0 163.1 55.4 0.5 -3.2 30 30 A N S S- 0 0 71 -2,-0.3 2,-0.3 -29,-0.2 -28,-0.2 -0.150 90.2 -60.1 65.0-162.7 53.9 3.2 -1.0 31 31 A R S S+ 0 0 172 -30,-0.2 53,-0.2 53,-0.1 2,-0.2 -0.818 76.6 92.0-117.4 158.4 55.2 4.0 2.5 32 32 A G B -E 83 0B 24 51,-1.9 51,-2.3 -2,-0.3 2,-0.4 -0.777 69.9 -73.0 143.1 171.8 55.6 1.8 5.6 33 33 A R - 0 0 194 49,-0.3 2,-0.4 -2,-0.2 49,-0.3 -0.834 39.4-178.5-103.4 136.3 58.2 -0.5 7.2 34 34 A I - 0 0 46 -2,-0.4 47,-1.8 47,-0.4 48,-0.0 -0.935 33.2-114.7-135.3 114.3 59.1 -3.9 5.8 35 35 A D B -F 80 0C 131 -2,-0.4 45,-0.3 45,-0.3 44,-0.1 -0.097 26.2-167.3 -42.9 136.8 61.6 -6.3 7.5 36 36 A F - 0 0 19 43,-1.3 44,-0.2 41,-0.1 -1,-0.1 0.821 45.6 -97.5-100.0 -40.0 64.6 -6.7 5.2 37 37 A G - 0 0 50 42,-0.7 42,-0.2 41,-0.1 43,-0.1 0.291 52.7 -87.9 138.7 -6.1 66.4 -9.7 6.8 38 38 A G S S+ 0 0 20 40,-1.0 41,-0.3 16,-0.1 40,-0.0 0.699 119.9 46.1 81.4 16.7 69.1 -8.0 8.9 39 39 A W + 0 0 115 39,-0.8 40,-0.1 38,-0.1 38,-0.1 -0.174 67.8 112.5 173.6 81.9 71.5 -8.0 5.9 40 40 A W + 0 0 73 38,-0.1 2,-0.3 -24,-0.1 -21,-0.2 -0.306 38.8 118.2-161.4 70.0 70.3 -6.9 2.5 41 41 A V E +C 18 0A 5 -23,-0.9 -23,-1.0 -24,-0.3 -24,-0.3 -0.929 4.9 135.4-137.1 162.8 71.9 -3.7 1.1 42 42 A D E S-C 17 0A 47 -26,-1.3 2,-0.2 1,-0.3 -25,-0.2 0.225 84.0 -21.5 176.7 -0.9 74.0 -2.5 -1.9 43 43 A K E -C 16 0A 86 -27,-1.4 -27,-4.5 27,-0.1 -1,-0.3 -0.783 58.0-137.9 156.3 162.0 72.2 0.7 -3.0 44 44 A I E -CD 15 69A 0 25,-1.6 25,-1.0 -29,-0.3 2,-0.5 -0.980 6.5-164.3-148.7 135.4 68.7 2.3 -2.8 45 45 A S E +CD 14 68A 37 -31,-5.2 2,-2.0 -2,-0.3 -31,-1.9 -0.641 16.1 168.9-119.1 76.7 66.5 4.1 -5.2 46 46 A T > + 0 0 0 21,-2.0 2,-1.1 -2,-0.5 3,-0.5 -0.409 16.1 152.5 -83.7 64.1 63.8 5.9 -3.2 47 47 A G T 3 S+ 0 0 16 -2,-2.0 -1,-0.1 -35,-0.4 -35,-0.1 -0.316 74.3 22.1 -91.4 56.0 62.6 8.0 -6.1 48 48 A N T 3 S+ 0 0 45 -2,-1.1 2,-0.3 1,-0.4 -1,-0.2 0.350 117.3 47.9 166.0 4.8 59.0 8.4 -4.9 49 49 A N S < S- 0 0 19 -3,-0.5 2,-1.8 -37,-0.1 16,-1.7 -0.969 78.1-110.5-161.6 145.9 58.9 7.9 -1.0 50 50 A D - 0 0 42 14,-0.3 34,-2.9 -2,-0.3 2,-0.3 -0.577 49.9-165.8 -77.8 88.5 60.8 9.0 2.1 51 51 A L - 0 0 0 -2,-1.8 12,-4.2 32,-0.3 2,-0.5 -0.624 13.9-166.8 -83.5 138.0 62.3 5.5 2.8 52 52 A I E -G 62 0C 15 -2,-0.3 2,-0.6 10,-0.3 10,-0.3 -0.956 6.3-179.0-122.1 119.0 63.9 4.7 6.1 53 53 A Y E -G 61 0C 0 8,-1.6 8,-1.6 -2,-0.5 2,-1.1 -0.916 27.2-134.4-121.3 112.4 66.0 1.6 6.3 54 54 A Y E -GH 60 80C 72 26,-1.2 25,-3.8 -2,-0.6 26,-0.6 -0.422 31.7-155.5 -62.6 98.6 67.6 0.7 9.7 55 55 A D E >> -G 59 0C 1 4,-1.2 3,-3.4 -2,-1.1 4,-0.8 -0.095 46.0 -68.0 -68.9 176.2 71.1 -0.1 8.5 56 56 A A T 34 S+ 0 0 34 19,-1.0 -1,-0.1 1,-0.3 22,-0.1 0.798 142.4 56.0 -35.8 -30.6 73.4 -2.5 10.5 57 57 A N T 34 S- 0 0 107 18,-0.3 -1,-0.3 2,-0.1 3,-0.2 0.109 120.8-111.3 -89.9 21.8 73.4 0.4 13.0 58 58 A G T <4 + 0 0 35 -3,-3.4 2,-1.8 -4,-0.3 -2,-0.2 0.901 63.0 169.0 49.5 29.4 69.6 0.3 13.2 59 59 A D E < -G 55 0C 84 -4,-0.8 2,-1.7 16,-0.1 -4,-1.2 -0.558 35.6-141.2 -77.5 84.3 70.3 3.6 11.5 60 60 A S E -G 54 0C 48 -2,-1.8 2,-1.7 -6,-0.3 -6,-0.3 -0.160 19.3-161.2 -48.0 83.3 66.8 4.5 10.3 61 61 A V E -G 53 0C 30 -2,-1.7 -8,-1.6 -8,-1.6 2,-1.2 -0.533 8.1-171.0 -74.3 90.9 68.2 5.8 7.0 62 62 A R E -G 52 0C 150 -2,-1.7 -10,-0.3 -10,-0.3 2,-0.2 -0.666 2.3-173.0 -88.8 94.6 65.2 7.9 6.1 63 63 A V - 0 0 12 -12,-4.2 2,-1.1 -2,-1.2 -12,-0.3 -0.556 26.0-128.2 -81.0 149.4 65.7 9.1 2.5 64 64 A D - 0 0 57 -14,-0.3 -14,-0.3 1,-0.3 -1,-0.1 -0.578 49.4 -91.3-101.3 76.0 63.1 11.6 1.3 65 65 A R S S+ 0 0 109 -16,-1.7 -18,-0.3 -2,-1.1 -1,-0.3 0.283 110.9 56.5 42.0 177.8 62.1 9.9 -2.0 66 66 A W S S+ 0 0 161 -21,-0.1 -19,-0.3 1,-0.1 2,-0.3 0.866 88.0 114.8 31.8 58.4 63.8 10.9 -5.2 67 67 A H - 0 0 90 -21,-0.5 -21,-2.0 -18,-0.1 2,-0.7 -0.954 53.9-154.6-155.2 132.9 67.2 9.9 -3.7 68 68 A D E +D 45 0A 124 -2,-0.3 2,-0.3 -23,-0.2 -23,-0.2 -0.884 26.9 162.4-112.9 106.8 69.7 7.1 -4.5 69 69 A I E -D 44 0A 52 -25,-1.0 -25,-1.6 -2,-0.7 2,-0.2 -0.846 9.9-178.9-120.1 158.6 71.9 6.0 -1.5 70 70 A T - 0 0 36 -2,-0.3 -27,-0.1 -27,-0.3 4,-0.1 -0.694 29.2-128.8-139.7-167.0 74.0 2.9 -0.9 71 71 A Y + 0 0 9 -2,-0.2 -30,-0.1 2,-0.1 -28,-0.1 -0.153 49.1 137.8-146.5 46.7 76.2 1.2 1.7 72 72 A P S S+ 0 0 112 0, 0.0 -1,-0.1 0, 0.0 -29,-0.0 0.483 95.5 7.5 -73.0 -0.6 79.5 0.3 -0.0 73 73 A N S S+ 0 0 157 -3,-0.1 -2,-0.1 2,-0.0 0, 0.0 0.445 112.8 79.3-144.4 -50.8 81.3 1.6 3.1 74 74 A R S S- 0 0 162 1,-0.2 -3,-0.1 -4,-0.1 -18,-0.0 0.136 107.5 -53.2 -53.8-176.3 78.9 2.4 5.9 75 75 A P - 0 0 31 0, 0.0 2,-1.0 0, 0.0 -19,-1.0 -0.526 59.0-154.3 -68.4 107.1 77.4 -0.4 8.1 76 76 A P + 0 0 56 0, 0.0 -35,-0.1 0, 0.0 -21,-0.0 -0.725 58.9 91.8 -88.0 101.0 75.9 -2.8 5.5 77 77 A K - 0 0 91 -2,-1.0 -19,-0.3 -37,-0.1 2,-0.2 -0.005 53.0-163.8 175.9 60.3 73.1 -4.7 7.2 78 78 A V - 0 0 0 -23,-0.2 -40,-1.0 1,-0.2 -39,-0.8 -0.361 3.2-164.5 -58.6 123.2 69.7 -3.2 6.9 79 79 A N - 0 0 53 -25,-3.8 -43,-1.3 1,-0.3 -42,-0.7 0.674 66.1 -35.0 -84.8 -15.3 67.4 -4.8 9.5 80 80 A S B -FH 35 54C 25 -26,-0.6 -26,-1.2 -45,-0.3 -1,-0.3 -0.958 59.3-107.2 173.0 170.5 64.2 -3.4 7.7 81 81 A I - 0 0 0 -47,-1.8 -47,-0.4 -2,-0.3 -28,-0.3 -0.598 19.6-178.9-111.1 176.3 62.7 -0.5 5.7 82 82 A E - 0 0 43 -49,-0.3 -49,-0.3 -30,-0.2 2,-0.2 -0.234 5.4-174.7-175.8 75.9 60.2 2.1 6.6 83 83 A I B E 32 0B 2 -51,-2.3 -51,-1.9 -32,-0.3 -32,-0.3 -0.492 360.0 360.0 -75.2 147.7 59.2 4.6 3.9 84 84 A L 0 0 83 -34,-2.9 -33,-0.1 -53,-0.2 -53,-0.1 0.352 360.0 360.0-142.6 360.0 56.9 7.4 5.1