==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/TRANSCRIPTION 25-NOV-05 2F52 . COMPND 2 MOLECULE: COLD SHOCK PROTEIN CSPB; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR M.ZEEB,H.STICHT,J.BALBACH . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4521.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 68.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 6.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 37.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 178 0, 0.0 2,-0.2 0, 0.0 49,-0.1 0.000 360.0 360.0 360.0 -27.9 -15.7 -13.7 -5.1 2 2 A L E -A 49 0A 49 47,-1.3 47,-2.0 18,-0.0 2,-0.4 -0.631 360.0-149.5 -98.8 160.5 -18.9 -13.4 -3.0 3 3 A E E +A 48 0A 127 45,-0.2 18,-0.4 -2,-0.2 2,-0.3 -0.977 19.3 166.5-130.6 143.5 -21.6 -10.8 -3.4 4 4 A G E -A 47 0A 5 43,-1.7 43,-1.8 -2,-0.4 2,-0.4 -0.996 32.0-120.2-152.1 156.1 -23.8 -9.1 -0.8 5 5 A K E -AB 46 19A 128 14,-1.7 14,-2.8 -2,-0.3 2,-0.4 -0.828 35.5-112.0-101.0 135.2 -26.2 -6.2 -0.5 6 6 A V E - B 0 18A 3 39,-1.7 38,-3.3 -2,-0.4 12,-0.3 -0.480 28.5-172.2 -66.5 119.2 -25.5 -3.5 2.1 7 7 A K E - 0 0 132 10,-4.1 2,-0.3 -2,-0.4 11,-0.2 0.901 67.8 -22.1 -79.5 -41.0 -28.2 -3.7 4.8 8 8 A W E - B 0 17A 84 9,-1.4 9,-1.0 35,-0.1 2,-0.3 -0.980 60.6-162.4-160.0 167.0 -27.1 -0.6 6.6 9 9 A F E - B 0 16A 61 7,-0.3 2,-0.4 -2,-0.3 7,-0.3 -0.987 15.8-132.1-158.8 147.4 -24.0 1.6 7.0 10 10 A N E >> - B 0 15A 61 5,-4.0 5,-1.6 -2,-0.3 4,-0.9 -0.847 3.7-156.9-103.6 135.9 -22.6 4.3 9.4 11 11 A S T 45S+ 0 0 90 -2,-0.4 -1,-0.1 3,-0.2 29,-0.1 0.676 85.6 74.9 -83.2 -15.1 -21.1 7.5 8.0 12 12 A E T 45S+ 0 0 147 1,-0.2 -1,-0.1 3,-0.1 28,-0.0 0.995 121.8 4.6 -60.0 -63.4 -19.1 8.0 11.2 13 13 A K T 45S- 0 0 126 2,-0.1 17,-0.2 17,-0.0 -1,-0.2 0.583 106.9-115.0 -98.7 -10.7 -16.5 5.4 10.6 14 14 A G T <5 + 0 0 2 -4,-0.9 2,-0.3 1,-0.2 -3,-0.2 0.981 69.3 120.1 77.2 68.9 -17.8 4.5 7.1 15 15 A F E < +B 10 0A 19 -5,-1.6 -5,-4.0 14,-0.2 2,-0.3 -0.988 32.3 179.9-156.2 161.4 -19.0 0.9 7.4 16 16 A G E -BC 9 28A 0 12,-1.2 12,-1.5 -7,-0.3 2,-0.4 -0.994 32.1-102.5-161.1 160.9 -22.2 -1.1 7.0 17 17 A F E -BC 8 27A 76 -9,-1.0 -10,-4.1 -2,-0.3 -9,-1.4 -0.712 34.8-157.1 -90.7 139.4 -23.6 -4.6 7.2 18 18 A I E -BC 6 26A 1 8,-3.1 8,-2.0 -2,-0.4 2,-0.6 -0.783 11.9-132.0-113.2 159.3 -24.1 -6.6 4.0 19 19 A E E -BC 5 25A 82 -14,-2.8 -14,-1.7 -2,-0.3 2,-0.9 -0.900 14.8-161.2-114.3 109.5 -26.5 -9.5 3.3 20 20 A V > - 0 0 6 4,-0.7 3,-1.7 -2,-0.6 2,-0.5 -0.759 22.1-130.5 -90.7 109.5 -24.9 -12.4 1.4 21 21 A E T 3 S+ 0 0 136 -2,-0.9 -18,-0.1 -18,-0.4 3,-0.1 -0.391 97.4 20.5 -59.2 108.9 -27.7 -14.5 -0.1 22 22 A G T 3 S+ 0 0 83 -2,-0.5 2,-0.3 1,-0.3 -1,-0.3 -0.090 119.1 64.3 121.9 -35.6 -26.6 -18.0 1.1 23 23 A Q S < S- 0 0 75 -3,-1.7 -1,-0.3 1,-0.2 -3,-0.3 -0.811 93.1 -89.7-117.9 160.9 -24.4 -17.1 4.0 24 24 A D S S- 0 0 130 -2,-0.3 -4,-0.7 1,-0.2 -1,-0.2 0.172 70.2 -60.4 -52.9-174.2 -25.1 -15.4 7.3 25 25 A D E -C 19 0A 108 -6,-0.2 2,-0.6 1,-0.0 -6,-0.2 -0.511 52.3-149.9 -74.3 139.4 -24.9 -11.6 7.4 26 26 A V E -C 18 0A 0 -8,-2.0 -8,-3.1 -2,-0.2 33,-0.2 -0.933 6.8-143.9-114.4 119.9 -21.4 -10.2 6.6 27 27 A F E -Cd 17 59A 26 31,-2.3 33,-2.7 -2,-0.6 2,-0.4 -0.423 13.4-151.7 -77.2 155.7 -20.3 -6.9 8.2 28 28 A V E -C 16 0A 0 -12,-1.5 -12,-1.2 31,-0.2 2,-0.3 -0.987 3.1-155.1-131.1 138.5 -18.2 -4.5 6.2 29 29 A H >> - 0 0 62 31,-0.4 3,-1.5 -2,-0.4 4,-0.8 -0.843 29.1-116.2-112.2 149.9 -15.6 -1.9 7.5 30 30 A F G >4 S+ 0 0 68 -2,-0.3 3,-2.4 1,-0.3 -1,-0.1 0.944 120.3 49.4 -46.9 -54.0 -14.5 1.3 5.7 31 31 A S G 34 S+ 0 0 82 1,-0.3 -1,-0.3 -3,-0.1 31,-0.1 0.774 103.3 63.4 -59.6 -20.8 -10.9 -0.1 5.4 32 32 A A G <4 S+ 0 0 20 -3,-1.5 31,-3.1 30,-0.1 2,-0.4 0.663 99.0 65.9 -77.8 -12.7 -12.5 -3.2 4.0 33 33 A I B << S-f 63 0B 3 -3,-2.4 2,-0.5 -4,-0.8 31,-0.2 -0.848 82.0-130.9-110.4 146.1 -13.8 -1.2 1.0 34 34 A Q + 0 0 142 29,-1.4 31,-0.3 -2,-0.4 -3,-0.1 -0.811 67.0 86.3 -97.1 128.1 -11.7 0.4 -1.6 35 35 A G > - 0 0 16 -2,-0.5 3,-2.3 29,-0.1 5,-0.2 0.244 41.7-169.5 146.2 80.5 -12.4 4.1 -2.4 36 36 A E T 3 S+ 0 0 176 1,-0.3 3,-0.3 2,-0.2 4,-0.1 0.785 96.2 56.0 -61.7 -21.6 -10.8 6.9 -0.4 37 37 A G T 3 S+ 0 0 66 1,-0.2 -1,-0.3 2,-0.1 -3,-0.0 0.219 132.8 4.5 -94.1 17.1 -13.3 9.2 -2.2 38 38 A F < + 0 0 130 -3,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.156 69.0 149.0 169.0 54.5 -16.3 7.1 -1.0 39 39 A K + 0 0 58 -3,-0.3 2,-0.6 2,-0.1 -3,-0.1 0.764 53.8 97.6 -73.7 -21.5 -15.3 4.3 1.4 40 40 A T S S- 0 0 61 -5,-0.2 2,-0.1 -4,-0.1 -25,-0.1 -0.533 76.3-137.1 -69.7 116.1 -18.7 4.7 3.1 41 41 A L - 0 0 0 -2,-0.6 2,-0.6 -31,-0.1 -26,-0.1 -0.470 12.7-125.5 -73.8 145.0 -21.0 2.0 1.5 42 42 A E > - 0 0 131 -2,-0.1 3,-2.7 4,-0.1 -36,-0.3 -0.798 32.4-106.1 -93.9 119.7 -24.5 3.1 0.7 43 43 A E T 3 S+ 0 0 101 -2,-0.6 -36,-0.2 1,-0.3 3,-0.1 -0.094 111.6 25.4 -41.1 131.4 -27.2 0.9 2.3 44 44 A G T 3 S+ 0 0 56 -38,-3.3 2,-0.4 1,-0.3 -1,-0.3 0.420 91.2 135.2 89.7 -4.0 -28.6 -1.2 -0.5 45 45 A Q < - 0 0 37 -3,-2.7 -39,-1.7 -39,-0.1 -1,-0.3 -0.649 53.2-133.3 -80.8 128.2 -25.4 -0.9 -2.5 46 46 A A E +A 5 0A 25 -2,-0.4 20,-3.1 20,-0.4 2,-0.3 -0.562 34.6 167.0 -79.9 143.4 -24.2 -4.2 -4.0 47 47 A V E -AE 4 65A 0 -43,-1.8 -43,-1.7 18,-0.3 2,-0.3 -0.937 29.7-121.9-147.8 171.4 -20.5 -5.0 -3.5 48 48 A S E +AE 3 64A 19 16,-2.1 16,-2.6 -2,-0.3 2,-0.3 -0.834 42.1 130.5-116.3 156.5 -18.1 -8.0 -3.8 49 49 A F E -A 2 0A 1 -47,-2.0 -47,-1.3 -2,-0.3 2,-0.3 -0.942 47.2-103.9 172.8 166.8 -15.9 -9.4 -1.1 50 50 A E E - E 0 61A 97 11,-1.7 11,-2.7 -2,-0.3 2,-0.6 -0.784 37.7-110.4-108.8 154.3 -14.7 -12.6 0.7 51 51 A I E - E 0 60A 65 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.727 32.0-168.3 -87.7 122.9 -15.9 -13.7 4.2 52 52 A V E - E 0 59A 51 7,-2.3 7,-1.8 -2,-0.6 2,-0.4 -0.919 25.5-120.7-110.7 128.3 -13.1 -13.4 6.8 53 53 A E E + E 0 58A 190 -2,-0.5 2,-0.3 5,-0.2 3,-0.1 -0.509 43.8 170.7 -68.6 120.0 -13.7 -15.1 10.2 54 54 A G - 0 0 17 3,-1.8 3,-0.1 -2,-0.4 -1,-0.0 -0.873 47.0-106.2-128.0 162.6 -13.5 -12.3 12.8 55 55 A N S S+ 0 0 168 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.975 123.1 47.5 -51.8 -60.2 -14.3 -12.2 16.6 56 56 A R S S- 0 0 173 1,-0.2 -1,-0.3 -3,-0.1 -3,-0.0 0.868 126.6-105.7 -51.0 -33.2 -17.5 -10.1 16.0 57 57 A G S S+ 0 0 19 -5,-0.1 -3,-1.8 -3,-0.1 2,-0.3 -0.999 75.0 11.3 144.8-146.1 -18.3 -12.7 13.3 58 58 A P E - E 0 53A 48 0, 0.0 -31,-2.3 0, 0.0 2,-0.3 -0.479 65.0-172.8 -69.4 128.0 -18.3 -12.7 9.5 59 59 A Q E -dE 27 52A 57 -7,-1.8 -7,-2.3 -2,-0.3 2,-0.5 -0.873 26.4-110.9-122.0 156.2 -16.6 -9.7 8.0 60 60 A A E - E 0 51A 5 -33,-2.7 -31,-0.4 -2,-0.3 2,-0.3 -0.726 32.1-163.7 -88.3 127.8 -16.3 -8.5 4.4 61 61 A A E + E 0 50A 22 -11,-2.7 -11,-1.7 -2,-0.5 -29,-0.1 -0.812 68.3 2.8-108.7 150.5 -12.8 -8.7 2.9 62 62 A N E S- 0 0 96 -2,-0.3 2,-0.5 -13,-0.2 -1,-0.3 0.937 84.4-160.3 40.6 67.2 -11.6 -6.9 -0.3 63 63 A V E -f 33 0B 0 -31,-3.1 -29,-1.4 -3,-0.3 2,-0.6 -0.658 9.2-166.1 -82.1 127.2 -15.0 -5.2 -0.7 64 64 A T E - E 0 48A 63 -16,-2.6 -16,-2.1 -2,-0.5 2,-0.4 -0.937 21.0-129.2-115.6 117.6 -15.7 -3.9 -4.2 65 65 A K E - E 0 47A 52 -2,-0.6 -18,-0.3 -31,-0.3 2,-0.2 -0.470 34.7-173.4 -65.3 117.0 -18.6 -1.5 -4.6 66 66 A E 0 0 62 -20,-3.1 -20,-0.4 -2,-0.4 -1,-0.0 -0.659 360.0 360.0-108.9 167.7 -20.7 -2.9 -7.5 67 67 A A 0 0 147 -2,-0.2 -20,-0.1 -22,-0.1 -1,-0.1 -0.423 360.0 360.0 -58.1 360.0 -23.7 -1.4 -9.3