==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 03-NOV-08 3F50 . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP160; . SOURCE 2 SYNTHETIC: YES; . AUTHOR W.S.HORNE,S.H.GELLMAN . 69 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5603.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 84.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 51 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 89 0, 0.0 67,-0.0 0, 0.0 63,-0.0 0.000 360.0 360.0 360.0-146.9 -8.0 -14.2 -3.3 2 2 A G > + 0 0 56 2,-0.1 4,-0.8 3,-0.1 3,-0.3 0.438 360.0 66.3-107.1 -16.7 -4.6 -14.7 -1.7 3 3 A I H >> S+ 0 0 62 1,-0.2 4,-2.1 2,-0.2 3,-0.9 0.899 95.0 58.3 -60.2 -45.4 -3.6 -11.4 -3.3 4 4 A V H 3> S+ 0 0 32 1,-0.3 4,-0.6 2,-0.2 -1,-0.2 0.625 99.5 58.3 -58.5 -18.3 -6.2 -10.0 -0.8 5 5 A Q H 34 S+ 0 0 104 -3,-0.3 4,-0.4 2,-0.2 -1,-0.3 0.764 105.3 47.7 -79.5 -30.1 -4.0 -11.6 1.9 6 6 A Q H XX S+ 0 0 104 -3,-0.9 4,-2.7 -4,-0.8 3,-0.5 0.837 102.0 64.3 -75.9 -35.0 -1.0 -9.5 0.7 7 7 A Q H 3X S+ 0 0 87 -4,-2.1 4,-3.0 1,-0.3 -1,-0.2 0.865 102.8 49.0 -47.2 -42.3 -3.3 -6.4 0.7 8 8 A N H 3X S+ 0 0 33 -4,-0.6 4,-2.0 2,-0.2 -1,-0.3 0.719 109.1 53.2 -71.5 -23.4 -3.5 -7.1 4.4 9 9 A N H <> S+ 0 0 72 -3,-0.5 4,-0.9 -4,-0.4 -2,-0.3 0.837 111.1 44.3 -77.8 -34.9 0.3 -7.3 4.3 10 10 A L H >X S+ 0 0 98 -4,-2.7 4,-2.6 2,-0.2 3,-0.5 0.929 116.0 48.0 -69.8 -46.4 0.5 -3.9 2.5 11 11 A L H 3X S+ 0 0 26 -4,-3.0 4,-2.5 1,-0.2 -2,-0.2 0.908 110.4 52.7 -55.1 -45.8 -2.1 -2.6 5.0 12 12 A R H 3X S+ 0 0 154 -4,-2.0 4,-1.0 2,-0.2 -1,-0.2 0.742 110.9 47.1 -62.4 -28.4 -0.0 -4.1 7.9 13 13 A A H X S+ 0 0 97 -4,-2.1 4,-3.1 2,-0.2 3,-1.1 0.996 109.5 45.0 -60.7 -62.7 6.4 7.9 12.5 22 22 A Q H 3X S+ 0 0 61 -4,-2.2 4,-2.4 1,-0.3 -2,-0.2 0.897 111.5 53.7 -47.1 -45.3 4.8 8.7 15.8 23 23 A L H 3X S+ 0 0 117 -4,-2.1 4,-1.7 1,-0.2 -1,-0.3 0.836 115.6 41.5 -57.4 -32.4 7.8 7.2 17.7 24 24 A T H 0 0 142 0, 0.0 4,-1.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-143.9 2.0 28.2 18.3 36 3 B W T 4 + 0 0 75 2,-0.2 4,-0.5 3,-0.1 5,-0.3 0.904 360.0 35.5 -77.1 -79.3 4.6 25.5 19.1 37 4 B E T > S+ 0 0 72 2,-0.2 4,-0.9 3,-0.2 3,-0.1 0.761 121.2 61.5 -54.6 -36.5 2.5 22.9 21.1 38 5 B X H > S+ 0 0 89 2,-0.2 4,-2.8 1,-0.1 5,-0.2 0.971 111.1 37.9 -17.4 -84.6 -0.6 24.5 17.8 39 6 B W H < S+ 0 0 62 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.1 0.282 112.4 50.2 -73.9 9.9 1.6 23.2 14.9 40 7 B D H > S+ 0 0 62 -4,-0.5 4,-1.8 -3,-0.1 -1,-0.2 0.620 111.1 53.8-112.7 -35.9 2.6 20.2 16.9 41 8 B X H X S+ 0 0 76 -4,-0.9 4,-2.5 -5,-0.3 -2,-0.2 0.946 114.5 46.9 -23.1 -75.1 -2.0 19.9 17.4 42 9 B A H X S+ 0 0 65 -4,-2.8 4,-1.9 2,-0.2 -3,-0.2 0.826 114.4 42.5 -51.1 -45.9 -1.9 20.1 13.6 43 10 B I H > S+ 0 0 79 -5,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.942 116.9 42.3 -72.7 -49.3 0.9 17.4 13.1 44 11 B A H X S+ 0 0 42 -4,-1.8 4,-1.0 2,-0.2 -2,-0.2 0.778 113.9 61.0 -75.9 -26.8 -0.3 14.9 15.7 45 12 B X H X S+ 0 0 145 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.811 113.6 42.9 -28.7 -57.3 -4.5 16.1 13.7 46 13 B Y H X S+ 0 0 153 -4,-1.9 4,-2.4 2,-0.2 -2,-0.2 0.881 102.5 50.4 -75.3 -44.8 -2.7 14.7 10.6 47 14 B A H X S+ 0 0 19 -4,-2.1 4,-1.2 2,-0.2 -2,-0.2 0.901 116.0 54.3 -64.7 -39.3 -1.1 11.6 12.0 48 15 B X H X S+ 0 0 50 -4,-1.0 4,-1.8 2,-0.2 -2,-0.2 0.880 111.4 49.7 -26.4 -62.1 -5.7 11.3 13.4 49 16 B R H X S+ 0 0 135 -4,-2.4 4,-1.9 1,-0.2 5,-0.2 0.950 113.7 39.1 -58.5 -52.4 -6.4 11.7 9.7 50 17 B I H X S+ 0 0 46 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.866 109.8 52.5 -73.0 -37.0 -4.0 9.0 8.6 51 18 B E H X S+ 0 0 67 -4,-1.2 4,-1.4 -5,-0.2 -1,-0.2 0.848 112.3 57.8 -67.7 -30.6 -4.8 6.6 11.4 52 19 B X H X S+ 0 0 85 -4,-1.8 4,-1.7 2,-0.2 -2,-0.2 0.739 113.3 42.3 -33.5 -51.9 -9.1 7.7 9.4 53 20 B L H X S+ 0 0 83 -4,-1.9 4,-2.0 2,-0.2 5,-0.2 0.924 106.1 51.3 -76.8 -42.8 -7.7 6.4 6.3 54 21 B I H X S+ 0 0 21 -4,-2.0 4,-1.7 -5,-0.2 -2,-0.2 0.911 112.3 54.4 -71.7 -45.0 -6.0 3.4 7.9 55 22 B X H >X S+ 0 0 64 -4,-1.4 4,-2.5 2,-0.2 3,-0.5 0.985 113.8 43.2 -12.7 -94.6 -10.3 2.8 9.6 56 23 B A H 3X S+ 0 0 70 -4,-1.7 4,-1.9 1,-0.2 -2,-0.2 0.724 116.6 45.5 -40.5 -38.3 -11.6 2.9 6.0 57 24 B A H 3< S+ 0 0 43 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.886 110.8 46.4 -79.9 -40.4 -8.9 0.7 4.6 58 25 B Q H > S+ 0 0 9 -3,-0.3 3,-3.4 2,-0.1 4,-1.7 0.622 105.9 55.3-115.6 -75.6 -10.6 -5.4 4.0 62 29 B X H 3< S+ 0 0 61 -4,-2.4 -2,-0.2 1,-0.2 -3,-0.1 0.813 116.8 47.6 -0.3 -48.1 -13.8 -6.7 6.8 63 30 B K T 3X S+ 0 0 48 -4,-1.1 4,-0.9 2,-0.2 -1,-0.2 0.616 110.0 44.9 -91.1 -17.4 -15.6 -6.6 3.3 64 31 B N T <4 S+ 0 0 48 -3,-3.4 -2,-0.2 2,-0.2 -1,-0.1 0.501 102.2 56.5-102.8 -11.9 -13.0 -8.4 1.2 65 32 B E T < S+ 0 0 95 -4,-1.7 -2,-0.2 3,-0.1 -3,-0.1 0.483 109.5 65.2 -85.9 -10.6 -12.6 -11.2 3.8 66 33 B X T > S+ 0 0 89 -5,-0.4 4,-1.6 2,-0.2 -2,-0.2 0.702 109.0 34.4 -42.2 -63.4 -17.2 -10.6 2.3 67 34 B A T < S+ 0 0 75 -4,-0.9 -3,-0.1 2,-0.2 -2,-0.1 0.160 111.6 55.7-101.3 15.7 -16.6 -11.7 -1.2 68 35 B L T 4 S+ 0 0 92 2,-0.2 -2,-0.2 -5,-0.1 -1,-0.1 0.522 108.5 50.5-121.1 -27.3 -13.9 -14.2 -0.1 69 36 B X T 4 0 0 117 1,-0.1 -2,-0.2 0, 0.0 -3,-0.1 0.868 360.0 360.0 -37.1 -59.8 -17.4 -15.8 2.5 70 37 B E < 0 0 190 -4,-1.6 -2,-0.2 0, 0.0 -1,-0.1 -0.289 360.0 360.0 109.7 360.0 -18.6 -15.5 -1.1