==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 23-JUN-00 1F6V . COMPND 2 MOLECULE: DNA TRANSPOSITION PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE MU; . AUTHOR L-H HUNG,G.CHACONAS,G.S.SHAW . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6690.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 18.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 23.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 109 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-166.9 -6.4 12.2 18.6 2 2 A S - 0 0 92 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.175 360.0-145.3 -50.1 141.3 -5.7 9.9 15.7 3 3 A R + 0 0 231 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 -0.082 39.0 157.9-102.1 35.8 -2.7 11.2 13.7 4 4 A I - 0 0 116 1,-0.1 3,-0.0 2,-0.0 -2,-0.0 -0.352 36.0-133.5 -60.5 135.2 -4.1 10.0 10.4 5 5 A A - 0 0 84 1,-0.1 2,-1.7 -2,-0.0 -1,-0.1 -0.064 44.3 -66.2 -77.8-172.3 -2.5 11.9 7.5 6 6 A K > - 0 0 176 2,-0.0 3,-0.7 0, 0.0 -1,-0.1 -0.556 61.2-153.5 -79.1 87.8 -4.5 13.4 4.6 7 7 A R T 3 S+ 0 0 178 -2,-1.7 38,-0.1 1,-0.2 37,-0.1 -0.064 76.9 44.2 -54.4 164.1 -5.7 10.2 3.0 8 8 A T T 3 S+ 0 0 126 36,-0.9 -1,-0.2 1,-0.1 36,-0.1 0.628 83.9 154.7 73.5 9.2 -6.4 10.4 -0.7 9 9 A A < - 0 0 24 -3,-0.7 2,-0.8 1,-0.1 33,-0.1 0.192 57.7 -89.3 -55.0-171.2 -3.2 12.3 -1.1 10 10 A I - 0 0 86 32,-1.1 2,-0.7 -3,-0.0 3,-0.3 -0.683 45.7-176.0-108.2 81.5 -1.4 12.3 -4.5 11 11 A N S S- 0 0 5 32,-1.0 28,-0.1 -2,-0.8 29,-0.1 -0.643 80.1 -29.1 -78.5 114.3 1.0 9.3 -4.4 12 12 A K S S- 0 0 7 -2,-0.7 -1,-0.3 23,-0.1 8,-0.2 0.716 100.0-119.8 53.1 15.2 3.0 9.3 -7.6 13 13 A T - 0 0 67 -3,-0.3 7,-0.1 2,-0.1 -4,-0.0 0.094 30.3 -85.9 43.1-168.2 -0.1 11.0 -9.1 14 14 A K S > S+ 0 0 175 2,-0.1 3,-1.2 3,-0.1 4,-0.4 0.832 127.3 44.6 -99.5 -45.2 -1.8 9.0 -11.9 15 15 A K G > S+ 0 0 192 1,-0.3 3,-0.6 2,-0.2 4,-0.4 0.930 121.6 40.4 -65.7 -42.1 0.2 10.4 -14.9 16 16 A A G 3> S+ 0 0 17 1,-0.2 4,-1.8 2,-0.2 5,-0.3 0.186 87.3 103.9 -90.8 20.0 3.5 10.0 -12.9 17 17 A D G <4 S+ 0 0 51 -3,-1.2 4,-0.5 1,-0.2 -1,-0.2 0.864 96.1 23.7 -69.7 -32.8 2.2 6.7 -11.5 18 18 A V T <4 S+ 0 0 94 -3,-0.6 4,-0.3 -4,-0.4 -1,-0.2 0.608 121.5 57.4-106.5 -15.4 4.5 4.7 -13.9 19 19 A K T >> S+ 0 0 133 -4,-0.4 4,-1.9 -7,-0.2 3,-1.0 0.867 104.9 51.9 -82.4 -34.0 7.1 7.5 -14.4 20 20 A A H 3X S+ 0 0 1 -4,-1.8 4,-1.8 1,-0.3 5,-0.4 0.948 96.3 67.4 -65.6 -44.6 7.8 7.7 -10.7 21 21 A I H 34 S+ 0 0 1 -4,-0.5 4,-0.3 -5,-0.3 -1,-0.3 0.777 108.5 42.1 -47.4 -22.2 8.3 3.9 -10.6 22 22 A A H <4 S+ 0 0 22 -3,-1.0 -2,-0.2 -4,-0.3 -1,-0.2 0.917 128.3 23.7 -92.3 -56.7 11.4 4.8 -12.7 23 23 A D H < S+ 0 0 51 -4,-1.9 12,-0.4 1,-0.1 -2,-0.2 0.127 112.1 78.4 -94.5 21.1 12.9 8.0 -11.1 24 24 A A S < S+ 0 0 6 -4,-1.8 12,-0.4 -5,-0.2 -3,-0.2 0.887 96.1 20.3 -95.4 -51.5 11.3 7.2 -7.7 25 25 A W S > S- 0 0 5 -5,-0.4 2,-2.4 -4,-0.3 3,-0.6 0.129 126.2 -20.7 -99.4-143.6 13.4 4.5 -5.9 26 26 A Q T 3 S+ 0 0 92 30,-0.7 46,-0.3 1,-0.2 42,-0.2 -0.368 90.7 120.0 -66.0 81.6 17.0 3.5 -6.5 27 27 A I T 3 S- 0 0 20 -2,-2.4 42,-0.4 -4,-0.1 -1,-0.2 0.607 96.6 -23.3-115.2 -24.7 17.2 4.9 -10.1 28 28 A N S < S- 0 0 92 -3,-0.6 -2,-0.1 40,-0.1 -5,-0.1 0.341 77.4-117.8-152.9 -49.6 20.1 7.4 -9.5 29 29 A G S S+ 0 0 36 -4,-0.3 -3,-0.1 0, 0.0 4,-0.0 -0.019 106.0 42.0 122.8 -30.1 20.4 8.4 -5.9 30 30 A E S > S+ 0 0 131 2,-0.1 4,-0.8 3,-0.1 0, 0.0 0.648 112.5 49.0-117.3 -29.4 19.7 12.1 -6.2 31 31 A K H > S+ 0 0 103 2,-0.2 4,-1.1 1,-0.1 -8,-0.1 0.782 113.0 49.0 -82.8 -25.4 16.8 12.1 -8.7 32 32 A E H > S+ 0 0 39 2,-0.2 4,-1.8 1,-0.2 5,-0.4 0.885 102.4 60.2 -80.8 -37.4 14.9 9.5 -6.7 33 33 A L H > S+ 0 0 64 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.881 102.1 57.2 -57.2 -33.9 15.3 11.3 -3.4 34 34 A E H X S+ 0 0 126 -4,-0.8 4,-0.6 2,-0.2 -1,-0.2 0.978 102.9 50.5 -62.6 -56.0 13.4 14.2 -5.0 35 35 A L H >< S+ 0 0 40 -4,-1.1 3,-1.9 -12,-0.4 -2,-0.2 0.961 118.2 38.5 -48.2 -58.0 10.3 12.2 -5.9 36 36 A L H >X S+ 0 0 62 -4,-1.8 4,-1.0 -12,-0.4 3,-0.9 0.791 100.4 77.5 -65.9 -21.4 10.0 10.8 -2.4 37 37 A Q H 3< S+ 0 0 109 -4,-1.5 -1,-0.3 -5,-0.4 -2,-0.2 0.716 118.8 14.1 -61.2 -12.7 11.1 14.2 -1.1 38 38 A Q T << S+ 0 0 132 -3,-1.9 -1,-0.3 -4,-0.6 -2,-0.2 0.112 126.5 60.2-146.0 20.9 7.5 15.1 -1.9 39 39 A I T <4 S+ 0 0 10 -3,-0.9 3,-0.4 -5,-0.1 -3,-0.2 0.710 95.2 51.1-121.5 -40.2 5.8 11.7 -2.4 40 40 A A S < S+ 0 0 53 -4,-1.0 4,-0.1 1,-0.2 -4,-0.1 0.600 114.9 50.1 -76.4 -5.0 6.0 9.7 0.9 41 41 A Q S S+ 0 0 135 -5,-0.3 -1,-0.2 1,-0.1 -2,-0.1 0.590 123.5 27.7-104.7 -14.4 4.7 12.7 2.6 42 42 A K S S+ 0 0 58 -3,-0.4 -32,-1.1 -32,-0.1 -2,-0.2 -0.029 88.3 110.9-136.5 35.9 1.7 13.2 0.2 43 43 A P + 0 0 26 0, 0.0 -32,-1.0 0, 0.0 -3,-0.1 0.981 21.2 157.0 -73.2 -79.9 1.1 9.6 -1.0 44 44 A G S S+ 0 0 39 -34,-0.2 -36,-0.9 -36,-0.1 -4,-0.1 0.708 77.5 56.4 61.5 13.1 -2.3 8.6 0.5 45 45 A A > + 0 0 41 -37,-0.1 4,-0.7 -38,-0.1 3,-0.4 0.373 65.3 107.5-152.6 -0.7 -2.4 6.1 -2.4 46 46 A L H >> + 0 0 42 1,-0.2 3,-1.9 2,-0.2 4,-1.6 0.929 63.6 77.2 -46.4 -82.1 0.8 3.9 -2.3 47 47 A R H 3> S+ 0 0 192 1,-0.3 4,-2.3 2,-0.2 6,-0.2 0.402 92.7 52.6 9.0 -75.7 -1.0 0.7 -1.2 48 48 A I H 34 S+ 0 0 144 -3,-0.4 3,-0.3 1,-0.3 -1,-0.3 0.932 129.6 19.0 -40.8 -63.7 -2.3 0.0 -4.7 49 49 A L H XX S+ 0 0 15 -3,-1.9 3,-1.9 -4,-0.7 4,-1.6 0.749 114.9 74.3 -82.4 -22.1 1.1 0.3 -6.3 50 50 A N H 3X S+ 0 0 49 -4,-1.6 4,-2.2 1,-0.3 5,-0.2 0.846 72.8 83.6 -59.8 -30.1 2.9 -0.2 -2.9 51 51 A H H 3< S+ 0 0 54 -4,-2.3 -1,-0.3 -3,-0.3 31,-0.1 0.844 120.0 7.9 -42.4 -31.1 2.0 -3.9 -3.2 52 52 A S H X4 S+ 0 0 1 -3,-1.9 3,-0.7 -5,-0.2 -1,-0.3 0.391 120.7 74.8-129.8 -4.2 5.1 -4.0 -5.4 53 53 A L H >< S+ 0 0 3 -4,-1.6 3,-1.7 1,-0.2 4,-0.3 0.638 72.0 85.2 -86.1 -10.9 6.5 -0.5 -4.8 54 54 A R G >X S+ 0 0 175 -4,-2.2 4,-1.3 1,-0.3 3,-1.1 0.769 78.9 70.4 -59.7 -17.9 7.6 -1.5 -1.3 55 55 A L G <4 + 0 0 4 -3,-0.7 -1,-0.3 1,-0.2 -2,-0.2 0.871 69.3 89.3 -66.4 -35.3 10.7 -2.7 -3.3 56 56 A A G <4 S+ 0 0 30 -3,-1.7 -30,-0.7 1,-0.3 -1,-0.2 0.804 107.6 23.6 -32.0 -35.8 11.6 1.0 -4.0 57 57 A A T <4 S+ 0 0 87 -3,-1.1 2,-1.4 -4,-0.3 -1,-0.3 0.752 104.2 89.3-103.7 -33.2 13.6 0.6 -0.7 58 58 A M >< + 0 0 72 -4,-1.3 3,-0.5 1,-0.2 -1,-0.1 -0.459 45.4 164.9 -67.3 94.2 14.0 -3.2 -0.7 59 59 A T T 3 + 0 0 98 -2,-1.4 -1,-0.2 1,-0.2 -3,-0.1 0.128 67.5 63.8 -97.8 22.2 17.3 -3.4 -2.6 60 60 A A T 3 + 0 0 75 -5,-0.1 -1,-0.2 2,-0.0 -2,-0.1 0.349 59.9 157.1-123.3 2.6 17.8 -7.1 -1.6 61 61 A H X - 0 0 22 -3,-0.5 2,-1.9 1,-0.2 3,-0.7 0.035 31.8-155.5 -32.8 90.0 14.8 -8.7 -3.3 62 62 A G T 3 S+ 0 0 71 1,-0.2 -1,-0.2 2,-0.1 -2,-0.0 -0.524 76.8 45.8 -78.0 83.7 16.4 -12.2 -3.4 63 63 A K T 3 S- 0 0 126 -2,-1.9 -1,-0.2 2,-0.1 2,-0.2 0.088 122.9 -4.1 175.2 -41.3 14.4 -13.6 -6.4 64 64 A G S < S+ 0 0 13 -3,-0.7 2,-0.3 2,-0.1 14,-0.1 -0.574 72.3 132.6-174.4 104.6 14.3 -11.0 -9.3 65 65 A E - 0 0 62 -2,-0.2 6,-0.1 13,-0.1 10,-0.1 -0.900 33.9-147.8-160.8 127.9 15.7 -7.5 -9.3 66 66 A R - 0 0 151 5,-0.3 -2,-0.1 -2,-0.3 3,-0.0 0.224 24.6-117.4 -76.4-153.1 17.9 -5.6 -11.7 67 67 A V S S+ 0 0 121 -40,-0.0 2,-0.3 0, 0.0 -40,-0.1 -0.435 75.9 24.5-151.7 71.0 20.4 -2.9 -10.7 68 68 A N S > S- 0 0 105 -42,-0.2 4,-1.1 1,-0.1 -40,-0.1 -0.987 115.0 -33.7 163.4-166.3 19.6 0.6 -12.1 69 69 A E H > S+ 0 0 94 -42,-0.4 4,-0.7 -2,-0.3 3,-0.2 0.860 138.3 52.3 -49.9 -31.0 16.7 2.7 -13.4 70 70 A D H >> S+ 0 0 69 1,-0.2 4,-2.3 2,-0.2 3,-1.1 0.955 90.7 74.5 -71.7 -46.8 15.3 -0.6 -14.7 71 71 A Y H 3> S+ 0 0 5 1,-0.3 4,-1.2 2,-0.2 -5,-0.3 0.839 90.0 61.6 -29.2 -51.9 15.7 -2.4 -11.3 72 72 A L H >X S+ 0 0 0 -4,-1.1 4,-2.7 -46,-0.3 3,-1.0 0.949 109.8 37.0 -46.3 -59.0 12.7 -0.4 -10.2 73 73 A R H S+ 0 0 99 -3,-1.1 5,-1.5 -4,-0.7 4,-0.6 0.946 116.3 52.9 -63.4 -42.9 10.4 -2.0 -12.8 74 74 A Q H 3<5S+ 0 0 61 -4,-2.3 -1,-0.3 3,-0.3 -2,-0.2 0.647 113.4 49.1 -67.4 -6.7 12.2 -5.4 -12.4 75 75 A A H <<5S+ 0 0 0 -4,-1.2 4,-0.2 -3,-1.0 -2,-0.2 0.887 125.2 22.1 -94.3 -58.6 11.4 -4.8 -8.7 76 76 A F H <5S+ 0 0 16 -4,-2.7 -2,-0.2 -5,-0.2 -3,-0.1 0.011 140.2 29.8 -97.7 28.1 7.7 -3.9 -8.8 77 77 A R T <5S+ 0 0 153 -4,-0.6 -3,-0.3 -5,-0.2 -4,-0.1 0.423 94.3 78.1-150.3 -43.4 7.1 -5.5 -12.2 78 78 A E S >S+ 0 0 62 3,-0.1 3,-0.7 4,-0.0 5,-0.7 0.377 121.2 66.1-155.5 -40.9 0.4 -12.2 -5.3 84 84 A D T 3 5S+ 0 0 67 1,-0.3 -32,-0.0 3,-0.1 -5,-0.0 0.902 112.1 40.0 -61.8 -37.6 4.2 -12.7 -5.9 85 85 A I T 3 5S+ 0 0 27 2,-0.1 -1,-0.3 4,-0.0 4,-0.1 0.499 103.7 90.5 -89.0 -1.8 4.9 -9.4 -4.1 86 86 A S T < 5S- 0 0 47 -3,-0.7 -3,-0.1 2,-0.3 -2,-0.0 0.340 108.3 -77.7 -69.4-147.4 2.2 -10.2 -1.5 87 87 A T T 5S+ 0 0 106 2,-0.1 2,-0.6 1,-0.0 -1,-0.1 0.229 111.2 86.2-100.4 13.5 3.1 -12.0 1.7 88 88 A L < + 0 0 95 -5,-0.7 -2,-0.3 1,-0.1 -1,-0.0 -0.937 44.9 109.5-118.2 115.0 3.2 -15.3 -0.1 89 89 A L 0 0 103 -2,-0.6 -1,-0.1 -4,-0.1 -2,-0.1 0.364 360.0 360.0-144.9 -67.4 6.4 -16.4 -1.9 90 90 A R 0 0 240 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.220 360.0 360.0 -53.6 360.0 8.4 -19.3 -0.3