==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 12-DEC-05 2FC9 . COMPND 2 MOLECULE: NCL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7398.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 52.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.3 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 104.8 -19.3 11.3 5.9 2 2 A S - 0 0 115 2,-0.1 2,-1.1 0, 0.0 4,-0.1 -0.967 360.0 -81.7-167.6 176.6 -22.7 10.0 4.9 3 3 A S S S+ 0 0 127 -2,-0.3 2,-0.2 2,-0.1 0, 0.0 -0.303 106.0 42.4 -88.3 51.2 -25.0 7.0 4.5 4 4 A G S S- 0 0 53 -2,-1.1 2,-0.3 0, 0.0 -2,-0.1 -0.781 91.9 -89.9 171.6 143.3 -23.5 6.0 1.2 5 5 A S + 0 0 125 -2,-0.2 -2,-0.1 1,-0.2 0, 0.0 -0.467 40.7 167.9 -67.1 126.3 -20.2 5.7 -0.7 6 6 A S - 0 0 116 -2,-0.3 2,-0.3 1,-0.2 -1,-0.2 0.812 35.0-131.3-104.8 -50.7 -19.3 9.0 -2.5 7 7 A G - 0 0 60 2,-0.0 2,-0.7 0, 0.0 -1,-0.2 -0.885 52.2 -8.8 131.0-162.9 -15.7 8.6 -3.6 8 8 A N - 0 0 84 -2,-0.3 2,-0.3 63,-0.1 63,-0.0 -0.625 67.0-178.8 -76.6 113.6 -12.4 10.5 -3.4 9 9 A S - 0 0 86 -2,-0.7 2,-1.2 0, 0.0 -2,-0.0 -0.843 34.7-109.2-115.2 151.6 -13.2 14.0 -2.2 10 10 A T - 0 0 139 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.657 38.2-160.5 -81.5 97.3 -10.9 17.0 -1.6 11 11 A W - 0 0 65 -2,-1.2 2,-2.2 1,-0.1 -3,-0.0 -0.587 29.5-107.3 -80.9 138.3 -10.7 17.4 2.1 12 12 A S S S+ 0 0 108 -2,-0.3 2,-0.3 81,-0.1 81,-0.1 -0.402 90.5 58.0 -65.5 81.2 -9.5 20.7 3.5 13 13 A G - 0 0 35 -2,-2.2 2,-0.4 79,-0.1 -2,-0.1 -0.950 69.5-122.3 171.6 171.1 -6.1 19.5 4.7 14 14 A E + 0 0 141 -2,-0.3 2,-0.4 73,-0.0 49,-0.1 -0.981 24.5 169.5-142.2 126.8 -2.8 17.8 3.7 15 15 A S - 0 0 11 -2,-0.4 47,-0.1 48,-0.2 73,-0.1 -0.979 22.9-165.6-141.3 125.2 -1.2 14.7 5.1 16 16 A K S S+ 0 0 88 -2,-0.4 44,-0.8 45,-0.1 2,-0.6 0.601 76.0 83.1 -81.6 -12.1 1.9 12.8 3.8 17 17 A T E -A 59 0A 31 71,-0.2 71,-1.8 42,-0.2 2,-0.4 -0.841 67.7-157.5 -98.8 122.2 0.9 9.8 5.9 18 18 A L E -AB 58 87A 0 40,-2.3 40,-2.8 -2,-0.6 2,-0.7 -0.799 9.6-139.2-100.6 139.3 -1.7 7.4 4.5 19 19 A V E -AB 57 86A 37 67,-2.7 67,-1.7 -2,-0.4 2,-0.4 -0.856 17.6-160.5-101.1 110.5 -3.8 5.1 6.7 20 20 A L E -AB 56 85A 0 36,-2.9 36,-2.5 -2,-0.7 2,-0.3 -0.722 12.4-179.6 -91.9 137.4 -4.2 1.6 5.2 21 21 A S E +AB 55 84A 59 63,-2.4 63,-1.8 -2,-0.4 34,-0.3 -0.915 54.9 39.4-133.9 160.0 -7.1 -0.6 6.4 22 22 A N S S+ 0 0 64 32,-2.1 33,-0.2 -2,-0.3 2,-0.2 0.819 74.4 170.3 72.3 31.7 -8.4 -4.1 5.7 23 23 A L - 0 0 8 31,-1.2 2,-0.3 -3,-0.2 -1,-0.2 -0.517 29.8-127.2 -77.6 142.3 -4.8 -5.4 5.4 24 24 A S > - 0 0 16 -2,-0.2 3,-2.2 57,-0.2 30,-0.1 -0.707 11.6-128.5 -92.5 140.4 -4.3 -9.2 5.2 25 25 A Y T 3 S+ 0 0 122 -2,-0.3 -1,-0.1 1,-0.3 28,-0.1 0.843 111.9 60.6 -52.4 -35.6 -2.0 -11.0 7.5 26 26 A S T 3 S+ 0 0 80 53,-0.1 2,-0.4 26,-0.1 -1,-0.3 0.741 93.0 83.1 -65.2 -22.5 -0.4 -12.6 4.5 27 27 A A < + 0 0 1 -3,-2.2 2,-0.3 51,-0.1 25,-0.2 -0.685 60.7 172.0 -87.4 134.7 0.5 -9.1 3.3 28 28 A T >> - 0 0 37 -2,-0.4 4,-1.8 24,-0.0 3,-1.6 -0.861 54.1 -80.7-135.8 169.9 3.6 -7.4 4.7 29 29 A E H 3> S+ 0 0 81 1,-0.3 4,-2.9 -2,-0.3 5,-0.2 0.793 127.2 63.5 -38.8 -34.0 5.8 -4.3 4.3 30 30 A E H 34 S+ 0 0 156 2,-0.2 4,-0.5 1,-0.2 -1,-0.3 0.942 104.1 43.0 -58.8 -50.5 7.2 -6.3 1.3 31 31 A T H X> S+ 0 0 48 -3,-1.6 4,-1.3 1,-0.2 3,-1.0 0.888 114.9 50.8 -63.6 -40.3 3.9 -6.4 -0.5 32 32 A L H 3X S+ 0 0 0 -4,-1.8 4,-2.9 1,-0.3 -2,-0.2 0.903 99.1 63.8 -64.7 -42.3 3.2 -2.7 0.3 33 33 A Q H 3< S+ 0 0 106 -4,-2.9 -1,-0.3 -5,-0.3 -2,-0.2 0.693 104.6 51.0 -55.7 -17.4 6.6 -1.7 -0.9 34 34 A E H <4 S+ 0 0 146 -3,-1.0 -1,-0.2 -4,-0.5 -2,-0.2 0.875 110.9 43.6 -87.2 -44.1 5.4 -2.9 -4.3 35 35 A V H < S+ 0 0 24 -4,-1.3 2,-0.7 1,-0.2 -2,-0.2 0.912 119.6 43.8 -67.8 -43.9 2.1 -1.0 -4.4 36 36 A F < + 0 0 2 -4,-2.9 -1,-0.2 1,-0.2 33,-0.0 -0.877 58.3 164.1-109.2 103.5 3.6 2.2 -3.1 37 37 A E S S+ 0 0 168 -2,-0.7 -1,-0.2 -3,-0.2 -2,-0.1 0.763 81.4 50.7 -85.8 -28.5 6.9 3.1 -4.8 38 38 A K S S+ 0 0 109 27,-0.1 2,-0.4 28,-0.0 23,-0.3 0.659 79.8 119.0 -82.1 -17.3 6.9 6.7 -3.7 39 39 A A - 0 0 7 1,-0.2 21,-0.3 -7,-0.1 3,-0.1 -0.323 51.3-161.9 -54.3 108.6 6.3 5.6 -0.1 40 40 A T S S+ 0 0 75 19,-1.2 2,-0.3 -2,-0.4 20,-0.2 0.690 77.5 5.8 -67.3 -17.8 9.3 6.9 1.8 41 41 A F E -C 59 0A 105 18,-1.6 18,-3.1 2,-0.0 2,-0.4 -0.909 64.9-157.1-167.4 137.0 8.4 4.5 4.6 42 42 A I E -C 58 0A 8 -2,-0.3 2,-0.4 16,-0.2 16,-0.2 -0.976 8.3-170.4-124.0 130.9 5.9 1.7 5.2 43 43 A K E -C 57 0A 114 14,-2.0 14,-2.8 -2,-0.4 -2,-0.0 -0.972 5.3-178.1-123.1 131.8 4.7 0.4 8.6 44 44 A V - 0 0 14 -2,-0.4 2,-0.3 12,-0.2 12,-0.2 -0.856 16.3-150.1-132.7 98.6 2.6 -2.6 9.2 45 45 A P + 0 0 33 0, 0.0 8,-2.5 0, 0.0 9,-0.4 -0.506 23.2 179.9 -69.8 124.1 1.6 -3.4 12.8 46 46 A Q B -D 52 0B 72 -2,-0.3 6,-0.3 6,-0.3 2,-0.1 -0.595 25.7 -98.4-117.1 179.3 1.1 -7.1 13.5 47 47 A N - 0 0 76 4,-1.1 -1,-0.1 -2,-0.2 5,-0.0 -0.468 42.6 -94.1 -95.4 169.5 0.2 -9.3 16.5 48 48 A Q S S+ 0 0 208 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 0.848 129.7 44.6 -49.3 -37.5 2.5 -11.2 18.8 49 49 A N S S- 0 0 116 2,-0.1 -1,-0.2 0, 0.0 -3,-0.0 0.929 129.5 -92.1 -74.3 -47.7 1.9 -14.2 16.6 50 50 A G S S+ 0 0 33 1,-0.2 2,-0.5 0, 0.0 -2,-0.1 0.545 75.6 136.0 137.1 35.8 2.4 -12.4 13.3 51 51 A K - 0 0 97 -25,-0.0 -4,-1.1 2,-0.0 2,-0.2 -0.937 58.5-112.5-114.0 128.6 -1.0 -11.2 12.1 52 52 A S B -D 46 0B 1 -2,-0.5 -6,-0.3 -6,-0.3 -27,-0.2 -0.373 22.2-131.4 -59.0 120.1 -1.5 -7.7 10.7 53 53 A K - 0 0 117 -8,-2.5 -1,-0.2 -2,-0.2 -7,-0.1 0.777 56.8 -93.7 -42.8 -29.3 -3.8 -5.8 13.1 54 54 A G S S+ 0 0 16 1,-0.5 -32,-2.1 -9,-0.4 -31,-1.2 0.422 97.6 62.1 125.2 5.3 -5.7 -4.9 10.0 55 55 A Y E -A 21 0A 84 -10,-0.4 -1,-0.5 -34,-0.3 2,-0.3 -0.886 56.6-155.2-147.4 176.8 -4.2 -1.6 9.0 56 56 A A E -A 20 0A 0 -36,-2.5 -36,-2.9 -2,-0.3 2,-0.6 -0.984 16.4-129.1-155.5 160.9 -0.9 0.1 8.0 57 57 A F E -AC 19 43A 79 -14,-2.8 -14,-2.0 -2,-0.3 2,-0.4 -0.921 23.3-166.8-121.3 106.6 0.9 3.5 8.0 58 58 A I E -AC 18 42A 0 -40,-2.8 -40,-2.3 -2,-0.6 2,-0.4 -0.731 3.9-159.5 -93.9 139.4 2.3 4.7 4.7 59 59 A E E +AC 17 41A 88 -18,-3.1 -18,-1.6 -2,-0.4 -19,-1.2 -0.941 12.8 173.4-121.0 140.6 4.8 7.6 4.6 60 60 A F - 0 0 5 -44,-0.8 -21,-0.1 -2,-0.4 3,-0.1 -0.686 47.6 -94.1-131.2-175.5 5.6 9.8 1.6 61 61 A A S S- 0 0 71 -23,-0.3 2,-0.3 1,-0.2 -45,-0.1 0.841 96.4 -35.0 -71.8 -34.3 7.6 12.9 0.7 62 62 A S S > S- 0 0 51 -46,-0.2 4,-2.1 -47,-0.1 5,-0.3 -0.968 76.7 -68.9-171.7 179.3 4.6 15.1 1.1 63 63 A F H > S+ 0 0 53 -2,-0.3 4,-0.9 1,-0.2 -48,-0.2 0.632 123.1 67.4 -59.5 -11.7 0.8 15.5 0.7 64 64 A E H > S+ 0 0 124 2,-0.2 4,-1.5 3,-0.1 -1,-0.2 0.986 108.9 27.9 -72.6 -63.2 1.6 15.4 -3.0 65 65 A D H > S+ 0 0 38 2,-0.2 4,-2.0 1,-0.2 5,-0.4 0.944 117.3 59.8 -64.5 -49.7 2.9 11.8 -3.4 66 66 A A H X S+ 0 0 0 -4,-2.1 4,-2.1 1,-0.3 -1,-0.2 0.874 111.0 42.3 -45.8 -44.0 0.8 10.5 -0.5 67 67 A K H X S+ 0 0 29 -4,-0.9 4,-1.9 -5,-0.3 -1,-0.3 0.810 105.6 64.6 -74.3 -30.8 -2.3 11.7 -2.4 68 68 A E H X S+ 0 0 110 -4,-1.5 4,-0.6 -3,-0.3 -2,-0.2 0.879 114.7 30.9 -59.5 -39.4 -0.9 10.4 -5.7 69 69 A A H X>S+ 0 0 13 -4,-2.0 4,-1.8 2,-0.2 5,-0.6 0.816 115.5 58.5 -87.8 -35.5 -1.1 6.8 -4.4 70 70 A L H <5S+ 0 0 6 -4,-2.1 4,-0.3 -5,-0.4 15,-0.2 0.763 103.9 55.1 -65.3 -24.8 -4.1 7.3 -2.1 71 71 A N H <5S+ 0 0 76 -4,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.849 125.6 19.4 -76.3 -36.0 -6.0 8.4 -5.2 72 72 A S H <5S+ 0 0 100 -4,-0.6 -2,-0.2 -5,-0.2 -3,-0.1 0.885 120.0 55.4 -96.9 -65.6 -5.3 5.2 -7.1 73 73 A C T <5S+ 0 0 8 -4,-1.8 3,-0.4 -5,-0.2 -3,-0.2 0.774 80.9 126.9 -39.7 -30.3 -4.2 2.6 -4.6 74 74 A N S -E 81 0C 12 3,-3.0 3,-1.4 -2,-1.0 -51,-0.1 -0.942 65.4 -12.5-116.0 131.2 -4.1 -7.4 -2.2 79 79 A E T 3 S- 0 0 122 -2,-0.5 -1,-0.2 1,-0.3 -53,-0.1 0.804 132.2 -52.7 52.9 30.2 -3.9 -11.1 -1.3 80 80 A G T 3 S+ 0 0 74 1,-0.2 2,-0.4 -3,-0.1 -1,-0.3 0.754 120.9 108.6 78.3 24.7 -7.6 -11.3 -2.1 81 81 A R E < -E 78 0C 118 -3,-1.4 -3,-3.0 -5,-0.1 2,-0.4 -0.972 68.5-128.2-139.3 121.8 -8.4 -8.4 0.3 82 82 A A E -E 77 0C 46 -2,-0.4 2,-0.4 -5,-0.3 -5,-0.3 -0.522 26.4-156.4 -70.0 122.6 -9.5 -4.9 -0.6 83 83 A I E -E 76 0C 2 -7,-2.5 -7,-2.0 -2,-0.4 -8,-0.6 -0.863 2.7-155.1-105.5 134.6 -7.3 -2.3 1.1 84 84 A R E -B 21 0A 123 -63,-1.8 -63,-2.4 -2,-0.4 2,-0.4 -0.796 2.1-152.6-108.1 150.0 -8.5 1.2 1.8 85 85 A L E +B 20 0A 3 -2,-0.3 2,-0.4 -65,-0.2 -65,-0.2 -0.976 13.4 177.3-125.3 135.0 -6.4 4.3 2.3 86 86 A E E -B 19 0A 110 -67,-1.7 -67,-2.7 -2,-0.4 2,-0.5 -0.997 37.9-107.6-139.5 133.3 -7.3 7.5 4.3 87 87 A L E -B 18 0A 25 -2,-0.4 -69,-0.2 -69,-0.2 -71,-0.1 -0.414 42.0-131.7 -60.4 110.9 -5.2 10.6 5.0 88 88 A Q + 0 0 89 -71,-1.8 -71,-0.2 -2,-0.5 -1,-0.1 -0.197 62.0 65.0 -62.1 155.5 -4.3 10.3 8.7 89 89 A G S S- 0 0 39 -74,-0.0 -74,-0.1 -76,-0.0 -76,-0.0 -0.891 85.6 -10.7 131.3-161.9 -4.8 13.3 10.9 90 90 A P S S- 0 0 108 0, 0.0 2,-1.0 0, 0.0 0, 0.0 -0.161 70.7 -99.2 -69.7 167.1 -7.7 15.4 12.3 91 91 A R - 0 0 216 1,-0.0 -3,-0.0 2,-0.0 -2,-0.0 -0.771 43.0-157.1 -94.0 98.6 -11.3 15.1 11.1 92 92 A G - 0 0 33 -2,-1.0 -79,-0.1 1,-0.0 -81,-0.0 0.028 3.8-141.3 -64.2 178.4 -11.9 18.0 8.7 93 93 A S - 0 0 88 -81,-0.1 -81,-0.1 1,-0.0 -1,-0.0 -0.999 9.0-120.1-148.5 143.5 -15.3 19.5 7.8 94 94 A P - 0 0 129 0, 0.0 2,-0.5 0, 0.0 -83,-0.0 0.029 33.2-103.0 -69.8-177.4 -17.1 20.8 4.7 95 95 A N - 0 0 162 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.943 33.2-120.8-118.5 113.6 -18.5 24.3 4.1 96 96 A S - 0 0 116 -2,-0.5 0, 0.0 1,-0.1 0, 0.0 0.007 29.1-176.0 -45.0 153.1 -22.2 24.8 4.4 97 97 A G + 0 0 69 1,-0.1 3,-0.2 3,-0.0 -1,-0.1 -0.478 19.6 160.5-160.6 81.4 -23.9 26.2 1.3 98 98 A P S S+ 0 0 126 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.884 80.9 7.6 -69.8 -40.5 -27.6 27.0 1.4 99 99 A S S S- 0 0 99 0, 0.0 2,-0.0 0, 0.0 0, 0.0 -0.958 77.5-123.7-149.3 126.3 -27.5 29.3 -1.6 100 100 A S 0 0 126 -2,-0.3 -3,-0.0 -3,-0.2 0, 0.0 -0.333 360.0 360.0 -67.1 147.6 -24.7 30.0 -4.1 101 101 A G 0 0 129 -2,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.181 360.0 360.0-121.3 360.0 -23.6 33.6 -4.5