==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 28-MAY-97 1FDM . COMPND 2 MOLECULE: FD MAJOR COAT PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; . AUTHOR F.C.L.ALMEIDA,S.J.OPELLA . 50 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4337.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 78.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 48.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 142 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 69.7 -19.0 15.1 1.0 2 2 A E - 0 0 116 1,-0.1 5,-0.1 0, 0.0 3,-0.1 -0.945 360.0-154.5-141.1 119.2 -17.8 12.5 -1.6 3 3 A G S S+ 0 0 90 -2,-0.4 2,-1.7 1,-0.2 -1,-0.1 0.868 93.2 68.5 -59.6 -32.4 -19.9 10.9 -4.2 4 4 A D S S- 0 0 92 1,-0.2 4,-0.4 -3,-0.1 -1,-0.2 -0.532 126.4 -64.3 -87.6 75.9 -17.4 8.0 -4.2 5 5 A D > - 0 0 45 -2,-1.7 3,-0.6 1,-0.2 -1,-0.2 0.359 53.2 -98.2 59.1 153.5 -18.2 6.6 -0.7 6 6 A P T 3 S+ 0 0 130 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.659 122.3 29.0 -78.2 -18.3 -17.6 8.7 2.4 7 7 A A T >> + 0 0 51 1,-0.1 4,-1.8 -5,-0.1 3,-0.6 -0.325 64.2 161.6-138.2 55.4 -14.3 6.9 3.0 8 8 A K H <> S+ 0 0 94 -3,-0.6 4,-1.7 -4,-0.4 5,-0.2 0.802 73.8 71.8 -47.9 -24.0 -13.0 5.8 -0.5 9 9 A A H >> S+ 0 0 75 1,-0.2 4,-1.6 2,-0.2 3,-0.9 0.992 100.4 38.9 -57.7 -62.2 -9.7 5.5 1.4 10 10 A A H <>>S+ 0 0 44 -3,-0.6 4,-1.2 1,-0.3 5,-1.0 0.914 105.8 69.1 -56.6 -39.0 -10.7 2.3 3.3 11 11 A F H 3X5S+ 0 0 96 -4,-1.8 4,-1.1 1,-0.3 5,-0.3 0.926 104.4 42.2 -45.8 -45.5 -12.5 1.1 0.2 12 12 A D H > - 0 0 39 2,-0.1 3,-1.6 3,-0.1 4,-0.9 0.907 40.1 -97.9 41.2 48.7 -8.6 -9.5 -1.8 23 23 A G T 34 - 0 0 21 1,-0.2 -7,-0.2 2,-0.1 -6,-0.1 -0.142 69.0 -70.4 43.4 -91.8 -8.7 -6.2 -3.8 24 24 A Y T 34 S+ 0 0 161 -2,-0.5 -1,-0.2 -8,-0.1 -7,-0.1 0.156 113.2 95.3 178.1 38.1 -5.2 -6.9 -5.1 25 25 A A T <>> + 0 0 9 -3,-1.6 4,-1.2 -9,-0.6 5,-0.6 0.644 53.0 97.2-108.5 -24.8 -2.7 -6.6 -2.4 26 26 A W T <5S- 0 0 125 -4,-0.9 -1,-0.1 -10,-0.4 -3,-0.1 0.789 115.8 -5.4 -35.8 -30.3 -2.5 -10.3 -1.4 27 27 A A T >>5S+ 0 0 33 3,-0.1 4,-1.9 2,-0.1 3,-1.5 0.531 133.5 55.7-130.8 -68.6 0.6 -10.3 -3.6 28 28 A M H 3>>S+ 0 0 94 1,-0.3 4,-2.1 2,-0.2 5,-0.6 0.790 99.4 71.5 -43.3 -27.3 1.2 -7.0 -5.5 29 29 A V H 3X5S+ 0 0 56 -4,-1.2 4,-1.3 1,-0.2 -1,-0.3 0.962 106.3 33.2 -58.4 -49.5 1.2 -5.4 -2.0 30 30 A V H <>X5S+ 0 0 99 -4,-2.1 4,-2.8 1,-0.3 3,-0.7 0.982 119.5 56.6 -62.3 -55.2 5.6 -3.0 -5.0 33 33 A V H 3XS+ 0 0 66 -4,-1.5 4,-2.0 -3,-0.7 5,-0.6 0.962 123.0 45.0 -69.2 -51.3 10.3 -1.7 -4.4 36 36 A T H X5S+ 0 0 75 -4,-2.8 4,-1.6 1,-0.2 -3,-0.2 0.994 123.7 33.9 -57.1 -65.5 8.9 1.4 -2.7 37 37 A I H X5S+ 0 0 83 -4,-1.4 4,-1.3 -5,-0.2 5,-0.3 0.705 119.3 60.7 -63.4 -15.3 10.0 0.5 0.8 38 38 A G H X5S+ 0 0 24 -4,-0.6 4,-2.2 -5,-0.4 5,-0.3 0.969 114.7 26.0 -75.7 -76.1 13.1 -1.0 -0.8 39 39 A I H X5S+ 0 0 123 -4,-2.0 4,-1.4 3,-0.2 -2,-0.2 0.725 124.4 62.6 -60.8 -14.6 14.7 1.8 -2.6 40 40 A K H XX S+ 0 0 160 -4,-2.2 4,-1.1 -5,-0.3 3,-0.8 0.990 123.6 24.5 -73.9 -68.3 17.7 2.1 1.3 43 43 A K H 3< S+ 0 0 173 -4,-1.4 -2,-0.2 -5,-0.3 -1,-0.2 0.308 101.4 94.1 -80.6 14.0 18.1 5.4 -0.6 44 44 A K T 3< S- 0 0 95 -4,-1.2 -1,-0.2 3,-0.2 -3,-0.2 0.898 121.3 -36.2 -72.9 -37.1 16.1 7.2 2.2 45 45 A F T <4>S- 0 0 113 -3,-0.8 5,-0.5 -4,-0.5 3,-0.4 0.145 97.4 -71.7-175.5 32.5 19.3 8.1 4.0 46 46 A T T <5S- 0 0 108 -4,-1.1 -3,-0.2 1,-0.3 2,-0.1 0.675 119.7 -14.6 77.0 14.1 21.8 5.2 3.7 47 47 A S T 5S- 0 0 68 -5,-0.5 -1,-0.3 -6,-0.4 -3,-0.2 -0.569 132.8 -24.0 161.0 -89.6 19.6 3.2 6.1 48 48 A K T 5S- 0 0 145 -3,-0.4 -2,-0.1 -2,-0.1 -1,-0.0 0.654 127.5 -28.7-122.3 -40.2 16.9 4.9 8.2 49 49 A A T 5 0 0 69 -4,-0.3 -3,-0.1 -3,-0.0 -4,-0.0 0.151 360.0 360.0-168.5 27.2 18.0 8.6 8.5 50 50 A S < 0 0 93 -5,-0.5 -4,-0.2 0, 0.0 -3,-0.0 0.866 360.0 360.0 -82.3 360.0 21.9 8.6 8.3