==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 24-JUL-00 1FEX . COMPND 2 MOLECULE: TRF2-INTERACTING TELOMERIC RAP1 PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.HANAOKA,Y.NISHIMURA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4424.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 55.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 45.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.7 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 141.2 46.8 7.0 16.1 2 2 A R - 0 0 152 1,-0.3 0, 0.0 46,-0.0 0, 0.0 -0.485 360.0-101.0-103.3 64.1 46.7 5.9 12.5 3 3 A I - 0 0 110 -2,-0.7 -1,-0.3 1,-0.0 2,-0.3 0.114 47.7 -91.5 46.3-169.9 43.2 4.2 12.4 4 4 A A - 0 0 67 -3,-0.1 2,-0.4 0, 0.0 -1,-0.0 -0.954 24.5-139.0-136.5 157.2 43.1 0.3 12.6 5 5 A F - 0 0 51 -2,-0.3 2,-0.1 4,-0.0 -2,-0.0 -0.936 17.6-171.8-119.2 140.0 43.1 -2.5 10.1 6 6 A T > - 0 0 79 -2,-0.4 4,-1.4 1,-0.0 0, 0.0 -0.366 46.0 -83.1-112.9-165.2 41.0 -5.7 10.4 7 7 A D H > S+ 0 0 136 1,-0.2 4,-1.3 2,-0.2 5,-0.1 0.857 127.7 52.9 -72.4 -32.5 40.8 -9.0 8.4 8 8 A A H > S+ 0 0 60 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.899 106.1 53.4 -70.0 -37.8 38.6 -7.4 5.7 9 9 A D H > S+ 0 0 12 1,-0.2 4,-3.3 2,-0.2 5,-0.4 0.904 105.5 54.1 -64.2 -38.9 41.0 -4.5 5.2 10 10 A D H X S+ 0 0 62 -4,-1.4 4,-1.3 1,-0.2 5,-0.3 0.884 113.1 42.7 -63.9 -35.7 43.9 -7.0 4.6 11 11 A V H X S+ 0 0 93 -4,-1.3 4,-1.7 3,-0.2 -2,-0.2 0.841 119.0 44.1 -79.6 -32.5 41.9 -8.7 1.8 12 12 A A H X S+ 0 0 18 -4,-2.4 4,-1.8 2,-0.2 5,-0.3 0.937 116.5 44.1 -77.6 -46.8 40.6 -5.4 0.3 13 13 A I H X S+ 0 0 9 -4,-3.3 4,-2.7 -5,-0.2 5,-0.3 0.914 119.5 44.3 -64.9 -39.8 44.0 -3.6 0.4 14 14 A L H X S+ 0 0 81 -4,-1.3 4,-3.8 -5,-0.4 5,-0.4 0.993 112.7 47.9 -68.4 -61.6 45.8 -6.7 -0.9 15 15 A T H X S+ 0 0 73 -4,-1.7 4,-0.8 -5,-0.3 -1,-0.2 0.852 119.4 43.1 -49.0 -35.1 43.3 -7.6 -3.7 16 16 A Y H X>S+ 0 0 55 -4,-1.8 4,-2.2 -5,-0.2 5,-0.6 0.952 117.8 41.9 -78.5 -51.0 43.3 -4.0 -4.8 17 17 A V H <5S+ 0 0 2 -4,-2.7 -2,-0.2 -5,-0.3 -3,-0.2 0.885 115.8 51.2 -64.5 -36.6 47.1 -3.3 -4.5 18 18 A K H <5S+ 0 0 128 -4,-3.8 -1,-0.2 -5,-0.3 -2,-0.2 0.805 111.2 48.8 -71.8 -26.7 47.9 -6.7 -6.1 19 19 A E H <5S+ 0 0 141 -4,-0.8 -2,-0.2 -5,-0.4 -1,-0.2 0.931 133.6 8.9 -79.2 -46.5 45.6 -6.0 -9.0 20 20 A N T <5S+ 0 0 73 -4,-2.2 2,-1.4 1,-0.2 -3,-0.2 0.876 115.1 71.9 -98.3 -60.8 46.8 -2.5 -9.9 21 21 A A < + 0 0 6 -5,-0.6 -1,-0.2 1,-0.2 0, 0.0 -0.367 57.8 123.5 -60.5 92.7 50.0 -1.9 -7.9 22 22 A R + 0 0 203 -2,-1.4 -1,-0.2 -3,-0.1 -4,-0.1 0.009 62.0 47.3-141.5 28.8 52.4 -4.3 -9.7 23 23 A S S > S- 0 0 62 -3,-0.0 2,-2.2 0, 0.0 4,-0.9 -0.957 98.3 -79.5-158.4 173.6 55.2 -2.0 -10.7 24 24 A P T 4 S+ 0 0 112 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 -0.380 116.7 50.2 -80.0 63.3 57.6 0.8 -9.4 25 25 A S T > S+ 0 0 81 -2,-2.2 4,-2.2 4,-0.1 6,-0.3 0.256 98.2 51.0-159.0 -57.6 54.9 3.5 -9.7 26 26 A S T 4 S+ 0 0 28 1,-0.2 7,-0.4 2,-0.2 6,-0.3 0.854 123.5 35.1 -64.9 -32.0 51.5 2.7 -8.1 27 27 A V T < S+ 0 0 34 -4,-0.9 -1,-0.2 1,-0.1 -6,-0.0 0.648 117.1 53.6 -95.9 -16.6 53.3 1.7 -4.9 28 28 A T T 4 S+ 0 0 101 -5,-0.2 -2,-0.2 2,-0.0 -1,-0.1 0.849 114.6 35.3 -86.0 -35.7 56.1 4.3 -5.1 29 29 A G S < S- 0 0 33 -4,-2.2 4,-0.1 1,-0.0 -4,-0.1 -0.061 92.3-104.3 -98.4-156.1 53.9 7.4 -5.5 30 30 A N S > S+ 0 0 67 3,-0.1 4,-0.8 2,-0.1 5,-0.1 -0.123 87.6 96.9-126.0 37.3 50.4 8.2 -4.0 31 31 A A H > S+ 0 0 64 -6,-0.3 4,-3.5 -5,-0.2 5,-0.3 0.930 82.6 43.0 -90.4 -63.7 48.1 7.6 -7.0 32 32 A L H > S+ 0 0 20 -6,-0.3 4,-1.0 1,-0.2 -5,-0.1 0.836 121.5 46.3 -53.3 -30.1 46.8 4.0 -6.6 33 33 A W H > S+ 0 0 1 -7,-0.4 4,-1.9 2,-0.2 3,-0.4 0.972 115.4 41.5 -77.6 -57.6 46.3 4.8 -2.9 34 34 A K H X S+ 0 0 87 -4,-0.8 4,-1.2 1,-0.2 -2,-0.2 0.911 112.3 57.6 -56.5 -40.4 44.6 8.3 -3.3 35 35 A A H X S+ 0 0 45 -4,-3.5 4,-1.2 1,-0.2 3,-0.4 0.905 105.4 50.2 -58.5 -39.0 42.6 6.9 -6.2 36 36 A M H < S+ 0 0 13 -4,-1.0 3,-0.4 -3,-0.4 4,-0.2 0.908 101.4 61.8 -67.4 -38.5 41.2 4.2 -3.8 37 37 A E H < S+ 0 0 95 -4,-1.9 3,-0.3 1,-0.2 -1,-0.2 0.832 105.7 48.6 -57.3 -28.4 40.3 6.9 -1.2 38 38 A K H < S+ 0 0 165 -4,-1.2 -1,-0.2 -3,-0.4 -2,-0.2 0.815 136.2 7.4 -81.8 -30.2 37.9 8.3 -3.9 39 39 A S S < S+ 0 0 103 -4,-1.2 -2,-0.2 -3,-0.4 -1,-0.2 -0.380 85.3 156.4-149.4 64.2 36.4 4.9 -4.7 40 40 A S - 0 0 37 -3,-0.3 -3,-0.0 -4,-0.2 -4,-0.0 -0.561 46.0-130.1 -90.7 158.1 37.5 2.2 -2.3 41 41 A L S S+ 0 0 164 -2,-0.2 2,-0.1 -29,-0.1 -1,-0.1 0.851 94.4 31.9 -75.6 -32.2 35.6 -1.0 -1.5 42 42 A T S S- 0 0 41 -33,-0.1 2,-0.7 2,-0.0 -2,-0.2 -0.341 100.5 -89.1-108.9-166.5 35.9 -0.4 2.3 43 43 A Q S S+ 0 0 181 -2,-0.1 2,-0.3 2,-0.0 -6,-0.1 -0.817 74.5 111.1-111.5 95.2 36.1 2.8 4.4 44 44 A H - 0 0 31 -2,-0.7 -4,-0.1 -8,-0.1 2,-0.1 -0.990 57.4-114.1-156.5 162.6 39.7 4.0 4.8 45 45 A S - 0 0 45 -2,-0.3 4,-0.2 1,-0.1 -7,-0.0 -0.235 26.8-117.9 -90.4-175.1 42.1 6.8 3.7 46 46 A W S > S+ 0 0 38 3,-0.1 4,-3.2 2,-0.1 5,-0.4 0.791 104.0 63.1 -94.7 -33.1 45.1 6.5 1.4 47 47 A Q H > S+ 0 0 111 1,-0.2 4,-3.5 2,-0.2 5,-0.3 0.989 109.2 37.2 -55.3 -69.7 47.8 7.5 4.0 48 48 A S H > S+ 0 0 9 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.822 116.2 60.3 -54.1 -26.6 47.3 4.7 6.5 49 49 A L H > S+ 0 0 6 2,-0.2 4,-1.2 -4,-0.2 -2,-0.2 0.992 115.1 28.8 -65.4 -60.0 46.8 2.5 3.4 50 50 A K H X S+ 0 0 43 -4,-3.2 4,-1.7 1,-0.2 5,-0.3 0.836 119.0 59.5 -71.0 -30.7 50.3 3.2 1.9 51 51 A D H X S+ 0 0 51 -4,-3.5 4,-1.7 -5,-0.4 -1,-0.2 0.943 105.0 47.4 -64.9 -45.4 51.8 3.7 5.3 52 52 A R H X S+ 0 0 35 -4,-2.1 4,-1.8 -5,-0.3 -1,-0.2 0.855 106.5 62.1 -65.1 -31.3 50.9 0.2 6.5 53 53 A Y H X>S+ 0 0 46 -4,-1.2 4,-2.1 1,-0.2 5,-1.3 0.991 114.2 29.4 -58.4 -63.2 52.2 -1.3 3.2 54 54 A L H <5S+ 0 0 109 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.759 112.1 71.6 -69.7 -21.7 55.9 -0.1 3.7 55 55 A K H <5S- 0 0 137 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.944 132.9 -33.0 -60.7 -47.1 55.4 -0.4 7.5 56 56 A H H <5S+ 0 0 119 -4,-1.8 -2,-0.2 -3,-0.4 -1,-0.1 0.057 122.8 70.3-169.9 46.6 55.3 -4.2 7.5 57 57 A L T <5S+ 0 0 75 -4,-2.1 -3,-0.2 -5,-0.1 -4,-0.1 0.545 101.0 28.3-129.9 -69.3 53.7 -5.7 4.3 58 58 A R < 0 0 185 -5,-1.3 -4,-0.1 1,-0.2 -5,-0.1 0.970 360.0 360.0 -63.9 -51.5 55.8 -5.3 1.1 59 59 A G 0 0 107 -6,-0.5 -1,-0.2 -5,-0.0 -5,-0.1 -0.102 360.0 360.0-109.8 360.0 59.2 -5.3 2.9