==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 15-DEC-05 2FEB . COMPND 2 MOLECULE: APOLIPOPROTEIN(A); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.CHITAYAT,V.KANELIS,M.L.KOSCHINSKY,S.P.SMITH . 102 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6815.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 18.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 117 0, 0.0 16,-0.1 0, 0.0 91,-0.1 0.000 360.0 360.0 360.0 146.6 -4.9 -15.2 -3.0 2 2 A E + 0 0 116 89,-0.9 2,-0.3 14,-0.1 16,-0.2 0.221 360.0 156.8 60.5 168.8 -7.7 -12.8 -4.2 3 3 A G - 0 0 38 14,-0.1 2,-0.2 13,-0.1 -1,-0.1 -0.969 32.3 -93.3 163.6-175.3 -11.3 -13.7 -4.0 4 4 A R - 0 0 201 -2,-0.3 3,-0.3 1,-0.1 12,-0.2 -0.747 53.3 -65.1-125.2 173.1 -14.9 -12.5 -3.8 5 5 A H S S+ 0 0 127 -2,-0.2 -1,-0.1 1,-0.2 31,-0.0 -0.296 79.6 108.3 -59.4 138.2 -17.5 -11.8 -1.1 6 6 A M + 0 0 150 1,-0.2 -1,-0.2 3,-0.1 29,-0.0 0.145 57.0 75.3-177.1 -40.3 -18.6 -14.9 0.8 7 7 A A - 0 0 28 -3,-0.3 2,-3.2 2,-0.1 -1,-0.2 -0.833 69.7-143.5 -97.7 109.7 -17.2 -14.7 4.3 8 8 A P S S+ 0 0 114 0, 0.0 2,-0.3 0, 0.0 7,-0.1 -0.296 77.3 44.6 -69.0 63.4 -19.1 -12.2 6.5 9 9 A T - 0 0 81 -2,-3.2 2,-0.3 5,-0.0 5,-0.2 -0.967 59.9-168.2-178.3-173.9 -15.9 -11.2 8.3 10 10 A E + 0 0 62 -2,-0.3 3,-0.2 1,-0.2 81,-0.0 -0.970 39.5 90.2-175.6-176.5 -12.2 -10.2 7.9 11 11 A N S S- 0 0 61 -2,-0.3 2,-1.2 1,-0.2 -1,-0.2 0.884 105.4 -40.3 71.7 102.1 -8.9 -9.6 9.7 12 12 A S S S+ 0 0 68 80,-0.2 2,-0.8 1,-0.2 3,-0.2 -0.288 147.9 25.8 53.2 -89.1 -6.7 -12.7 10.0 13 13 A T S S+ 0 0 145 -2,-1.2 -1,-0.2 -3,-0.2 -3,-0.2 -0.516 112.8 71.2-101.7 64.2 -9.5 -15.2 10.9 14 14 A G S S+ 0 0 11 -2,-0.8 2,-0.3 1,-0.5 -1,-0.2 0.523 92.7 32.7-140.4 -43.7 -12.4 -13.4 9.2 15 15 A V S S- 0 0 10 -3,-0.2 -1,-0.5 1,-0.2 -5,-0.1 -0.859 74.7-113.8-123.1 158.9 -12.2 -13.5 5.4 16 16 A Q + 0 0 85 -2,-0.3 -1,-0.2 -12,-0.2 -2,-0.1 0.357 63.9 103.2 -66.3-153.1 -10.9 -16.1 2.9 17 17 A D - 0 0 3 -15,-0.2 2,-0.3 -16,-0.1 -2,-0.1 0.822 56.0-140.7 74.0 107.7 -7.8 -15.4 0.7 18 18 A a - 0 0 30 74,-0.3 76,-0.2 -16,-0.2 2,-0.1 -0.725 11.1-147.8-101.6 149.8 -4.6 -17.1 1.7 19 19 A Y - 0 0 31 74,-4.7 76,-0.4 -2,-0.3 2,-0.3 -0.406 6.0-134.1-104.8-176.6 -1.1 -15.6 1.5 20 20 A R - 0 0 136 -2,-0.1 2,-0.8 74,-0.1 74,-0.0 -0.987 61.9 -33.2-146.0 132.2 2.4 -17.0 0.9 21 21 A G S S- 0 0 47 -2,-0.3 2,-0.5 1,-0.1 3,-0.1 -0.463 130.3 -0.4 64.4-104.1 5.7 -16.4 2.6 22 22 A D > - 0 0 78 -2,-0.8 3,-3.1 1,-0.1 5,-0.2 -0.827 61.3-166.3-122.9 91.6 5.4 -12.7 3.7 23 23 A G T 3 S+ 0 0 4 51,-0.7 4,-0.3 -2,-0.5 52,-0.2 0.743 96.3 41.4 -45.5 -26.9 2.1 -11.2 2.7 24 24 A Q T 3 S+ 0 0 6 50,-0.4 2,-0.5 1,-0.1 -1,-0.3 -0.074 78.4 116.1-114.0 32.2 3.7 -7.8 3.5 25 25 A S S < S- 0 0 48 -3,-3.1 -1,-0.1 49,-0.1 3,-0.1 -0.268 105.4 -80.9 -94.6 47.2 7.2 -8.5 2.1 26 26 A Y S S+ 0 0 153 -2,-0.5 2,-0.2 1,-0.2 -2,-0.1 0.878 105.6 103.9 58.3 39.1 6.8 -5.8 -0.5 27 27 A R + 0 0 169 -4,-0.3 2,-0.4 -5,-0.2 -1,-0.2 -0.744 25.0 81.3-136.5-176.2 4.8 -8.1 -2.7 28 28 A G - 0 0 22 -2,-0.2 40,-0.1 1,-0.2 39,-0.1 -0.576 45.3-161.6 116.4 -69.2 1.2 -8.8 -3.7 29 29 A T + 0 0 98 -2,-0.4 -1,-0.2 38,-0.2 39,-0.1 0.748 59.2 115.6 56.9 23.8 0.4 -6.3 -6.5 30 30 A L - 0 0 19 37,-0.2 3,-0.1 -3,-0.2 -1,-0.1 0.787 58.2-158.6 -90.3 -32.8 -3.3 -7.1 -5.8 31 31 A S + 0 0 31 1,-0.2 8,-0.5 36,-0.2 2,-0.2 0.721 59.3 104.0 59.1 21.2 -4.1 -3.6 -4.6 32 32 A T B -A 38 0A 43 6,-0.2 59,-0.4 35,-0.1 6,-0.3 -0.772 54.2-159.6-126.1 171.0 -7.1 -5.2 -2.9 33 33 A T - 0 0 0 4,-2.6 2,-0.7 57,-0.3 57,-0.2 -0.722 59.0 -37.5-160.1 105.6 -8.0 -6.2 0.7 34 34 A I S S- 0 0 2 -2,-0.2 -24,-0.1 1,-0.2 56,-0.0 -0.751 110.0 -36.0 87.0-111.4 -10.6 -8.7 1.9 35 35 A T S S+ 0 0 18 -2,-0.7 -1,-0.2 -33,-0.0 -30,-0.1 -0.248 132.6 4.6-147.4 53.6 -13.7 -8.7 -0.3 36 36 A G S S+ 0 0 44 1,-0.4 2,-0.3 -3,-0.2 46,-0.2 0.535 104.6 89.6 138.8 33.4 -14.5 -5.1 -1.4 37 37 A R - 0 0 43 -4,-0.1 -4,-2.6 44,-0.1 -1,-0.4 -0.991 47.8-158.1-151.0 153.6 -11.7 -2.9 -0.2 38 38 A T B -A 32 0A 29 -2,-0.3 -6,-0.2 -6,-0.3 28,-0.1 -0.417 36.8 -99.9-117.8-165.7 -8.3 -1.6 -1.4 39 39 A b - 0 0 0 26,-0.9 40,-0.3 -8,-0.5 27,-0.2 0.460 57.6-120.5 -97.2 -5.4 -5.1 -0.1 0.1 40 40 A Q - 0 0 0 25,-0.3 39,-0.1 -9,-0.2 26,-0.1 0.888 32.0 -95.0 63.2 103.1 -6.1 3.5 -0.7 41 41 A S > - 0 0 26 24,-0.2 3,-2.9 1,-0.2 2,-2.1 -0.260 38.0-118.2 -51.2 117.2 -3.6 5.1 -3.0 42 42 A W T 3 S+ 0 0 13 22,-1.8 -1,-0.2 1,-0.3 22,-0.1 -0.377 107.8 37.9 -62.1 82.7 -1.2 7.0 -0.7 43 43 A S T 3 S+ 0 0 71 -2,-2.1 2,-1.5 10,-0.1 -1,-0.3 0.082 80.3 111.1 159.9 -22.6 -2.0 10.4 -2.2 44 44 A S < - 0 0 40 -3,-2.9 2,-1.1 20,-0.1 4,-0.4 -0.603 46.4-173.9 -79.7 89.4 -5.7 10.2 -2.8 45 45 A M + 0 0 67 -2,-1.5 4,-0.1 1,-0.2 -1,-0.1 -0.734 49.4 87.3 -89.8 97.8 -7.0 12.7 -0.2 46 46 A T S S+ 0 0 124 -2,-1.1 -1,-0.2 2,-0.4 3,-0.1 0.287 88.4 29.1-150.4 -67.5 -10.8 12.4 -0.3 47 47 A P S S- 0 0 55 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.913 131.3 -13.6 -73.0 -44.1 -12.5 9.7 1.8 48 48 A H S S- 0 0 21 -4,-0.4 2,-0.8 32,-0.1 -2,-0.4 -0.980 76.1 -93.1-160.1 147.6 -9.8 9.7 4.5 49 49 A W - 0 0 157 -2,-0.3 -4,-0.1 1,-0.2 3,-0.1 -0.499 35.7-161.5 -66.4 104.5 -6.2 10.9 5.1 50 50 A H - 0 0 1 -2,-0.8 2,-0.3 1,-0.2 -1,-0.2 0.972 44.1 -88.0 -49.9 -72.6 -4.1 8.0 4.1 51 51 A R S S- 0 0 84 0, 0.0 2,-0.6 0, 0.0 -1,-0.2 -0.976 73.4 -13.3 177.5-174.2 -0.9 9.0 5.8 52 52 A R S S- 0 0 148 -2,-0.3 5,-0.3 -3,-0.1 3,-0.1 -0.195 75.5-140.0 -46.6 92.8 2.4 10.9 5.6 53 53 A I >> - 0 0 41 -2,-0.6 2,-3.8 1,-0.2 3,-1.7 -0.009 38.2 -70.1 -54.6 163.4 2.3 11.5 1.9 54 54 A P T 34 S+ 0 0 58 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.201 123.0 69.9 -56.3 63.1 5.5 11.3 -0.3 55 55 A L T 34 S+ 0 0 128 -2,-3.8 -2,-0.1 -3,-0.1 -3,-0.1 0.419 98.6 36.0-148.3 -35.3 6.9 14.5 1.3 56 56 A Y T <4 S+ 0 0 114 -3,-1.7 -3,-0.1 2,-0.0 -4,-0.0 0.856 108.1 64.1 -94.0 -45.4 7.8 13.7 4.9 57 57 A Y S < S- 0 0 52 -4,-0.7 2,-3.3 -5,-0.3 0, 0.0 -0.458 102.4 -96.1 -80.9 154.0 9.1 10.1 4.6 58 58 A P - 0 0 127 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.262 61.5 -98.5 -67.7 60.2 12.2 9.2 2.5 59 59 A N + 0 0 110 -2,-3.3 -6,-0.0 -6,-0.1 0, 0.0 0.755 54.3 179.6 20.8 68.1 10.1 8.4 -0.6 60 60 A A - 0 0 85 1,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.964 46.6 -99.5 -56.3 -57.1 10.3 4.6 0.1 61 61 A G - 0 0 35 3,-0.0 2,-0.3 0, 0.0 -1,-0.1 0.574 40.5-167.4 132.2 61.5 8.2 3.7 -2.9 62 62 A L - 0 0 47 1,-0.1 2,-2.2 -20,-0.1 3,-0.1 -0.586 24.2-131.3 -76.8 129.2 4.5 2.9 -2.2 63 63 A T > - 0 0 29 -2,-0.3 3,-1.0 3,-0.2 2,-0.3 -0.432 44.1-105.2 -79.9 67.4 2.8 1.3 -5.2 64 64 A R T 3 S- 0 0 174 -2,-2.2 -22,-1.8 1,-0.3 -1,-0.1 -0.268 97.7 -7.2 50.1-106.0 -0.2 3.7 -5.1 65 65 A N T 3 S+ 0 0 39 -2,-0.3 2,-1.1 -24,-0.3 -26,-0.9 -0.282 90.1 143.3-113.8 46.0 -3.0 1.5 -3.6 66 66 A Y < - 0 0 74 -3,-1.0 -3,-0.2 -27,-0.2 -37,-0.1 -0.726 63.4-110.3 -90.5 93.6 -1.1 -1.8 -3.5 67 67 A c S S+ 0 0 1 -2,-1.1 2,-0.3 -39,-0.1 -38,-0.2 0.175 71.1 120.7 -23.0 111.6 -2.2 -3.5 -0.3 68 68 A R - 0 0 17 -29,-0.1 9,-1.0 -40,-0.1 -44,-0.1 -0.945 54.1-114.2-164.9-177.1 0.9 -3.4 1.8 69 69 A N - 0 0 9 -2,-0.3 -43,-0.2 2,-0.2 9,-0.1 -0.985 21.3-124.9-137.3 146.6 2.5 -2.1 5.1 70 70 A P S S+ 0 0 77 0, 0.0 -1,-0.1 0, 0.0 8,-0.0 0.943 99.0 4.8 -53.0 -55.9 5.3 0.4 5.9 71 71 A D S S- 0 0 98 1,-0.1 2,-0.3 -3,-0.1 -2,-0.2 0.558 98.1 -92.2 -98.8-114.1 7.4 -2.0 7.8 72 72 A A + 0 0 52 -47,-0.1 -1,-0.1 -4,-0.1 -47,-0.1 -0.960 51.1 132.6-160.3 175.6 6.7 -5.8 8.3 73 73 A E S S- 0 0 132 -2,-0.3 -50,-0.0 -4,-0.1 -48,-0.0 -0.313 79.5 -61.0 172.3 -76.1 5.0 -8.4 10.4 74 74 A I S S+ 0 0 97 1,-0.4 -51,-0.7 -52,-0.1 -50,-0.4 0.220 111.1 26.6-164.3 -45.3 2.8 -11.0 8.6 75 75 A R S S- 0 0 9 -52,-0.2 -1,-0.4 -51,-0.1 -51,-0.1 -0.974 81.6-104.8-134.6 147.6 -0.0 -9.2 6.8 76 76 A P - 0 0 1 0, 0.0 -7,-0.2 0, 0.0 14,-0.1 -0.037 23.1-159.8 -63.3 171.5 -0.4 -5.7 5.4 77 77 A W + 0 0 42 -9,-1.0 2,-0.3 12,-0.1 12,-0.2 -0.497 31.5 135.2-159.0 81.1 -2.5 -2.9 7.1 78 78 A b B -B 88 0B 2 10,-0.9 10,-1.1 1,-0.2 -38,-0.1 -0.934 52.8 -98.6-131.0 153.2 -3.6 -0.0 5.0 79 79 A Y - 0 0 55 -2,-0.3 2,-0.2 -40,-0.3 8,-0.2 0.142 39.4-125.6 -57.4-179.3 -6.9 1.9 4.7 80 80 A T - 0 0 0 2,-0.2 -41,-0.1 -41,-0.2 5,-0.1 -0.779 13.6-119.9-128.4 173.0 -9.4 1.2 1.9 81 81 A M S S+ 0 0 77 -2,-0.2 -44,-0.1 -16,-0.1 -1,-0.1 0.820 85.1 98.2 -81.9 -33.8 -11.2 3.0 -0.8 82 82 A D S >> S- 0 0 65 -46,-0.2 2,-3.0 1,-0.2 3,-1.0 -0.394 77.7-135.3 -59.3 116.0 -14.7 2.1 0.5 83 83 A P T 34 S+ 0 0 105 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.171 96.4 62.4 -70.0 50.2 -15.9 5.1 2.5 84 84 A S T 34 S+ 0 0 107 -2,-3.0 -2,-0.1 -4,-0.0 -3,-0.1 0.107 101.2 41.6-160.6 25.1 -17.1 2.7 5.3 85 85 A V T <4 - 0 0 36 -3,-1.0 -4,-0.0 -5,-0.1 -48,-0.0 0.461 55.1-173.2-136.7 -68.2 -13.9 1.0 6.5 86 86 A R S < S+ 0 0 154 -4,-0.6 2,-0.3 -6,-0.1 -7,-0.1 0.156 78.1 38.1 82.1 -19.2 -10.8 3.2 6.9 87 87 A W + 0 0 99 -8,-0.2 2,-0.3 -9,-0.1 -8,-0.2 -0.924 64.1 150.8-163.6 135.4 -8.8 0.1 7.7 88 88 A E B -B 78 0B 10 -10,-1.1 -10,-0.9 -2,-0.3 2,-0.4 -0.982 40.3-107.3-162.7 155.6 -8.6 -3.5 6.4 89 89 A Y - 0 0 58 -2,-0.3 -78,-0.2 -12,-0.2 -12,-0.1 -0.731 43.2-104.9 -91.3 135.6 -6.2 -6.4 5.9 90 90 A c - 0 0 2 -2,-0.4 2,-3.0 -57,-0.2 -57,-0.3 -0.106 47.6 -88.2 -52.5 155.1 -5.2 -7.3 2.4 91 91 A N S S+ 0 0 1 -59,-0.4 -89,-0.9 -88,-0.1 2,-0.3 -0.387 92.4 115.9 -69.0 73.6 -6.8 -10.5 1.0 92 92 A L + 0 0 12 -2,-3.0 -74,-0.3 -91,-0.1 2,-0.3 -0.972 36.1 169.9-147.7 126.9 -4.1 -12.7 2.4 93 93 A T - 0 0 23 -2,-0.3 -74,-4.7 -82,-0.1 2,-0.4 -0.927 47.4 -77.1-137.1 161.0 -4.4 -15.4 5.1 94 94 A R - 0 0 184 -2,-0.3 -74,-0.1 -76,-0.2 -76,-0.0 -0.416 50.8-144.9 -61.0 113.0 -2.2 -18.1 6.6 95 95 A a - 0 0 27 -2,-0.4 2,-2.5 -76,-0.4 3,-0.1 -0.591 17.5-117.9 -83.1 141.9 -2.3 -20.9 4.0 96 96 A P S S+ 0 0 124 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.323 102.7 51.2 -76.0 59.8 -2.2 -24.6 5.3 97 97 A V S S+ 0 0 89 -2,-2.5 -77,-0.1 1,-0.5 -3,-0.0 0.263 87.9 67.4-152.3 -66.8 1.1 -25.3 3.6 98 98 A T - 0 0 61 -3,-0.1 -1,-0.5 1,-0.1 2,-0.2 -0.263 62.2-162.7 -67.6 156.5 4.0 -22.9 4.3 99 99 A E - 0 0 165 -3,-0.1 2,-0.3 0, 0.0 -78,-0.1 -0.574 11.3-124.5-127.0-169.9 5.5 -22.7 7.8 100 100 A S + 0 0 102 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.983 26.8 161.7-147.5 132.1 7.6 -20.4 9.9 101 101 A S 0 0 125 -2,-0.3 -1,-0.1 1,-0.2 0, 0.0 0.756 360.0 360.0-110.0 -72.9 10.9 -21.0 11.8 102 102 A V 0 0 209 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.424 360.0 360.0 -64.9 360.0 12.7 -17.7 12.6