==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JUL-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 06-JUN-12 4FHQ . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.LIU,C.ZHAN,Y.PATSKOVSKY,R.C.BHOSLE,S.G.NATHENSON,S.C.ALMO, . 101 2 8 7 1 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7107.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 50.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 30.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 224 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -53.8 -43.8 14.1 10.2 2 2 A P - 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.358 360.0 -99.0 -74.1 155.6 -40.5 13.5 8.3 3 3 A S - 0 0 109 1,-0.1 12,-0.1 -2,-0.0 2,-0.1 -0.166 38.6 -97.3 -68.5 159.0 -37.4 15.6 9.2 4 4 A a - 0 0 19 1,-0.1 -1,-0.1 10,-0.1 12,-0.0 -0.355 42.9-106.8 -65.4 154.1 -36.2 18.6 7.2 5 5 A K > - 0 0 149 4,-0.1 3,-1.3 1,-0.1 -1,-0.1 -0.254 37.2 -99.3 -73.0 174.0 -33.4 18.0 4.7 6 6 A E T 3 S+ 0 0 141 1,-0.3 -1,-0.1 11,-0.0 -2,-0.1 0.908 126.1 54.2 -67.8 -41.7 -29.9 19.3 5.5 7 7 A D T 3 S+ 0 0 99 10,-0.1 11,-5.6 11,-0.0 -1,-0.3 0.511 110.9 71.1 -64.4 -2.5 -30.2 22.4 3.5 8 8 A E E < -A 17 0A 53 -3,-1.3 42,-0.1 9,-0.3 -4,-0.1 -0.788 58.2-170.9-120.3 158.5 -33.4 22.9 5.6 9 9 A Y E -A 16 0A 36 7,-2.7 7,-2.5 -2,-0.3 2,-0.3 -0.946 37.1 -92.9-139.6 159.5 -34.4 23.7 9.2 10 10 A P E +A 15 0A 96 0, 0.0 2,-0.4 0, 0.0 5,-0.2 -0.579 37.5 173.4 -85.3 136.5 -37.8 23.6 10.9 11 11 A V E > -A 14 0A 49 3,-2.2 3,-2.7 -2,-0.3 2,-0.1 -0.926 63.9 -50.9-137.3 116.3 -40.1 26.6 11.1 12 12 A G T 3 S- 0 0 82 -2,-0.4 -1,-0.0 1,-0.3 0, 0.0 -0.434 121.1 -25.4 55.6-127.5 -43.6 26.2 12.5 13 13 A S T 3 S+ 0 0 120 -2,-0.1 -1,-0.3 -3,-0.1 2,-0.2 0.303 126.2 86.2 -95.5 9.3 -45.1 23.3 10.5 14 14 A E E < S-A 11 0A 129 -3,-2.7 -3,-2.2 15,-0.1 2,-0.5 -0.597 70.9-133.3-107.9 166.0 -42.8 23.9 7.5 15 15 A a E -A 10 0A 46 -5,-0.2 -10,-0.1 -2,-0.2 -2,-0.0 -0.946 32.3-168.4-117.7 109.8 -39.3 22.9 6.5 16 16 A b E -A 9 0A 1 -7,-2.5 -7,-2.7 -2,-0.5 17,-0.1 -0.739 23.4-103.7-108.4 144.4 -37.4 25.9 5.2 17 17 A P E -A 8 0A 46 0, 0.0 -9,-0.3 0, 0.0 17,-0.2 -0.273 35.7-120.6 -65.7 144.6 -34.0 26.2 3.4 18 18 A K - 0 0 59 -11,-5.6 32,-0.2 1,-0.1 2,-0.2 -0.440 27.4-104.4 -79.1 157.4 -30.9 27.3 5.3 19 19 A c B -B 49 0B 0 30,-3.6 30,-2.9 4,-0.1 3,-0.1 -0.540 39.6-107.8 -77.7 147.1 -28.8 30.4 4.3 20 20 A S > - 0 0 71 28,-0.2 3,-1.7 -2,-0.2 27,-0.1 -0.248 51.9 -70.9 -69.0 161.3 -25.5 29.8 2.6 21 21 A P T 3 S+ 0 0 44 0, 0.0 25,-0.2 0, 0.0 54,-0.2 -0.289 125.7 33.1 -52.7 137.9 -22.2 30.3 4.4 22 22 A G T 3 S+ 0 0 0 23,-1.0 17,-2.9 52,-0.5 2,-0.3 0.414 105.8 97.1 90.3 0.5 -21.6 34.0 5.0 23 23 A Y E < -C 38 0C 76 -3,-1.7 2,-0.3 15,-0.3 -1,-0.3 -0.937 53.7-159.3-127.7 145.9 -25.3 34.6 5.4 24 24 A R E -C 37 0C 74 13,-3.4 13,-2.8 -2,-0.3 2,-0.5 -0.758 40.6 -85.9-113.0 165.1 -27.8 35.0 8.3 25 25 A V E +C 36 0C 12 26,-3.0 11,-0.2 -2,-0.3 3,-0.1 -0.617 39.8 175.1 -78.6 118.3 -31.6 34.5 8.3 26 26 A K E S- 0 0 112 9,-1.7 2,-0.3 -2,-0.5 -1,-0.2 0.936 73.2 -13.4 -83.5 -59.5 -33.4 37.7 7.3 27 27 A E E S-C 35 0C 140 8,-1.0 8,-1.9 0, 0.0 -1,-0.3 -0.979 76.3-111.8-144.5 139.9 -37.0 36.3 7.3 28 28 A A - 0 0 46 -2,-0.3 5,-0.1 6,-0.2 22,-0.0 -0.091 46.0 -82.1 -65.9 167.3 -38.2 32.7 7.3 29 29 A b 0 0 29 1,-0.2 5,-0.1 -12,-0.1 4,-0.1 0.009 360.0 360.0 -72.1 171.9 -39.9 31.0 4.3 30 30 A G 0 0 85 3,-0.1 -1,-0.2 4,-0.0 4,-0.1 -0.501 360.0 360.0 120.8 360.0 -43.5 31.1 3.1 31 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 32 33 A T 0 0 148 0, 0.0 2,-0.2 0, 0.0 -3,-0.1 0.000 360.0 360.0 360.0 145.7 -41.1 30.5 -1.2 33 34 A G - 0 0 31 -4,-0.1 -3,-0.1 1,-0.1 -17,-0.1 -0.707 360.0 -60.7-126.8-173.9 -37.9 29.7 0.6 34 35 A T - 0 0 22 -2,-0.2 2,-0.7 -17,-0.2 -6,-0.2 -0.331 40.9-133.6 -69.3 148.7 -35.9 31.7 3.2 35 36 A V E -C 27 0C 68 -8,-1.9 -9,-1.7 -3,-0.0 -8,-1.0 -0.893 26.4-162.1-104.4 104.3 -34.4 35.0 2.3 36 37 A c E -C 25 0C 40 -2,-0.7 -11,-0.2 -11,-0.2 16,-0.0 -0.672 4.1-164.1 -92.4 139.6 -30.8 35.0 3.5 37 38 A E E -C 24 0C 51 -13,-2.8 -13,-3.4 -2,-0.3 -18,-0.0 -0.931 29.9 -85.4-126.8 151.1 -28.8 38.2 4.0 38 39 A P E -C 23 0C 66 0, 0.0 -15,-0.3 0, 0.0 -16,-0.1 -0.093 45.6-101.8 -58.8 143.7 -25.0 38.8 4.4 39 40 A d - 0 0 9 -17,-2.9 3,-0.1 1,-0.1 4,-0.1 -0.310 42.5-109.0 -55.7 142.2 -23.2 38.5 7.7 40 41 A P > - 0 0 58 0, 0.0 3,-1.4 0, 0.0 -1,-0.1 -0.356 49.4 -76.6 -70.8 159.0 -22.4 41.9 9.3 41 42 A P T 3 S+ 0 0 133 0, 0.0 3,-0.1 0, 0.0 32,-0.1 -0.234 119.7 27.3 -60.7 145.1 -18.8 43.0 9.4 42 43 A G T 3 S+ 0 0 55 1,-0.3 15,-2.1 30,-0.2 2,-0.3 0.609 110.8 87.5 75.3 11.8 -16.6 41.4 12.0 43 44 A T E < +D 56 0D 28 -3,-1.4 -1,-0.3 13,-0.3 2,-0.3 -0.909 50.8 174.4-132.6 169.6 -18.8 38.3 11.9 44 45 A Y E -D 55 0D 35 11,-2.9 11,-3.5 -2,-0.3 2,-0.3 -0.962 21.0-155.2-159.7 165.7 -18.9 35.1 9.9 45 46 A I - 0 0 15 29,-2.4 -23,-1.0 -2,-0.3 -22,-0.1 -0.912 4.9-168.4-150.8 134.0 -20.6 31.8 9.4 46 47 A A + 0 0 35 -2,-0.3 2,-0.3 -25,-0.2 29,-0.1 0.528 68.3 41.9-104.9 -8.2 -18.7 28.9 7.7 47 48 A H S S- 0 0 141 1,-0.1 -25,-0.3 -27,-0.1 -28,-0.1 -0.779 104.2 -62.3-128.9 172.5 -21.5 26.5 7.1 48 49 A L - 0 0 70 -2,-0.3 2,-0.4 -27,-0.1 -28,-0.2 -0.238 61.3-147.2 -54.2 149.2 -25.2 26.5 6.0 49 50 A N B +B 19 0B 5 -30,-2.9 -30,-3.6 -42,-0.1 -40,-0.1 -0.976 40.3 171.6-138.9 131.8 -27.2 28.6 8.5 50 51 A G + 0 0 21 -2,-0.4 2,-0.2 -32,-0.2 -1,-0.1 0.210 62.1 102.8-115.8 9.6 -30.7 28.6 10.0 51 52 A L - 0 0 103 2,-0.2 -26,-3.0 -32,-0.1 -32,-0.1 -0.561 69.1-141.1 -91.2 156.7 -29.8 31.3 12.6 52 53 A S S S+ 0 0 73 -28,-0.2 2,-0.3 -2,-0.2 -28,-0.1 0.257 87.5 65.8 -93.9 7.7 -30.6 35.0 12.5 53 54 A K S S- 0 0 162 -30,-0.1 2,-0.2 -14,-0.0 -2,-0.2 -0.940 71.1-143.3-126.9 150.2 -27.1 35.7 13.9 54 55 A d - 0 0 21 -2,-0.3 2,-0.3 -30,-0.1 -9,-0.2 -0.647 32.8 -97.1-102.0 169.7 -23.6 35.2 12.6 55 56 A L E -D 44 0D 83 -11,-3.5 -11,-2.9 -2,-0.2 2,-0.1 -0.677 37.1-113.2 -88.1 139.7 -20.6 34.1 14.6 56 57 A Q E -D 43 0D 166 -2,-0.3 -13,-0.3 -13,-0.2 2,-0.1 -0.443 36.4-112.9 -66.4 140.6 -18.2 36.8 15.9 57 58 A e - 0 0 19 -15,-2.1 2,-0.3 -2,-0.1 -1,-0.1 -0.411 24.0-116.4 -70.6 149.6 -14.7 36.6 14.4 58 59 A Q - 0 0 86 20,-0.2 2,-0.3 -2,-0.1 20,-0.2 -0.684 33.6-157.3 -77.1 141.5 -11.7 35.7 16.4 59 60 A M - 0 0 153 -2,-0.3 2,-0.6 12,-0.1 21,-0.1 -0.822 11.2-124.3-119.4 166.3 -9.1 38.5 16.6 60 61 A f - 0 0 30 -2,-0.3 8,-0.3 19,-0.1 5,-0.1 -0.909 13.4-160.1-122.9 109.3 -5.4 38.4 17.4 61 62 A D > > - 0 0 81 -2,-0.6 3,-1.5 1,-0.1 5,-1.2 -0.755 2.8-165.4 -91.3 108.6 -3.9 40.4 20.2 62 63 A P G > 5S+ 0 0 78 0, 0.0 3,-2.1 0, 0.0 -1,-0.1 0.665 84.0 77.0 -70.3 -15.2 -0.1 40.9 19.6 63 64 A A G 3 5S+ 0 0 86 1,-0.3 -2,-0.1 2,-0.1 -3,-0.0 0.351 99.3 46.7 -72.0 5.5 0.2 41.9 23.3 64 65 A M G < 5S- 0 0 127 -3,-1.5 35,-0.3 2,-0.2 -1,-0.3 0.090 126.0-104.3-128.7 17.1 -0.0 38.2 23.8 65 66 A G T < 5S+ 0 0 4 -3,-2.1 18,-5.2 1,-0.2 2,-0.4 0.722 81.5 130.1 70.4 21.7 2.4 37.3 21.1 66 67 A L E < -E 82 0E 17 -5,-1.2 2,-0.4 16,-0.3 16,-0.3 -0.915 34.0-176.0-113.7 136.1 -0.3 36.3 18.8 67 68 A R E -E 81 0E 170 14,-4.2 14,-3.7 -2,-0.4 2,-0.4 -0.976 36.3 -97.5-131.8 142.0 -0.7 37.4 15.2 68 69 A A E +E 80 0E 46 -2,-0.4 12,-0.3 -8,-0.3 3,-0.1 -0.410 35.1 176.7 -61.5 114.9 -3.4 36.8 12.6 69 70 A S E S+ 0 0 92 10,-3.0 2,-0.3 -2,-0.4 11,-0.2 0.708 77.7 21.6 -89.7 -25.8 -2.3 34.0 10.3 70 71 A R E S-E 79 0E 93 9,-1.8 9,-1.6 11,-0.0 -1,-0.3 -0.990 85.8-126.0-139.5 136.8 -5.6 34.0 8.4 71 72 A N - 0 0 129 -2,-0.3 2,-0.6 7,-0.2 -12,-0.1 -0.500 29.8-101.8 -84.0 152.0 -8.0 37.0 8.2 72 73 A e + 0 0 44 -2,-0.2 5,-0.2 -14,-0.2 -30,-0.2 -0.616 47.0 170.0 -75.2 115.2 -11.7 36.8 9.1 73 74 A S - 0 0 55 3,-2.4 5,-0.1 -2,-0.6 -51,-0.1 -0.325 48.8 -99.5-101.7-168.5 -13.9 36.6 6.0 74 75 A R S S+ 0 0 94 -30,-0.1 -29,-2.4 1,-0.1 -52,-0.5 0.812 123.2 41.1 -82.6 -33.4 -17.7 35.8 5.8 75 76 A T S S+ 0 0 69 -54,-0.2 2,-0.3 -31,-0.2 -1,-0.1 0.448 122.9 34.5 -93.6 -1.5 -17.1 32.2 4.9 76 77 A E S S- 0 0 81 -5,-0.0 -3,-2.4 -54,-0.0 -1,-0.2 -0.976 74.7-121.2-156.1 141.7 -14.2 31.6 7.3 77 78 A N - 0 0 39 -2,-0.3 2,-0.2 -5,-0.2 -20,-0.1 -0.231 39.3 -97.7 -72.1 162.4 -13.0 32.6 10.8 78 79 A A - 0 0 10 -20,-0.2 2,-0.4 -6,-0.1 -7,-0.2 -0.589 35.5-145.7 -77.5 147.4 -9.7 34.3 11.4 79 80 A V E -E 70 0E 17 -9,-1.6 -10,-3.0 -2,-0.2 -9,-1.8 -0.966 9.6-138.3-118.6 131.4 -6.8 32.0 12.6 80 81 A f E -E 68 0E 4 -2,-0.4 16,-2.1 -12,-0.3 2,-0.3 -0.663 18.6-177.5 -93.6 143.1 -4.1 33.1 15.0 81 82 A G E -E 67 0E 18 -14,-3.7 -14,-4.2 -2,-0.3 2,-0.2 -0.823 35.4 -86.0-124.8 169.9 -0.4 32.4 14.9 82 83 A g E -E 66 0E 40 -2,-0.3 -16,-0.3 -16,-0.3 -17,-0.1 -0.547 35.1-126.8 -77.0 136.6 2.5 33.2 17.2 83 84 A S > - 0 0 17 -18,-5.2 3,-1.3 -2,-0.2 -1,-0.0 -0.602 49.9 -77.1 -74.0 144.3 4.3 36.5 17.0 84 85 A P T 3 S+ 0 0 119 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.002 119.8 37.6 -39.4 142.3 8.1 36.1 16.7 85 86 A G T 3 S+ 0 0 39 1,-0.3 17,-3.0 -3,-0.1 2,-0.3 0.305 107.0 83.8 89.3 -8.0 10.0 35.2 19.9 86 87 A H E < -F 101 0F 61 -3,-1.3 2,-0.3 15,-0.3 -1,-0.3 -0.872 58.9-158.5-124.1 158.6 7.2 33.0 20.9 87 88 A F E -F 100 0F 75 13,-2.1 13,-2.6 -2,-0.3 2,-0.2 -0.958 34.1 -98.2-131.3 153.0 6.2 29.4 20.2 88 89 A h E +F 99 0F 38 -2,-0.3 11,-0.2 11,-0.2 3,-0.1 -0.506 38.3 167.9 -77.0 135.7 2.7 27.9 20.6 89 90 A I E S+ 0 0 72 9,-2.9 2,-0.4 1,-0.3 10,-0.2 0.467 70.7 42.6-121.0 -12.4 1.9 25.9 23.7 90 91 A V E S+F 98 0F 76 8,-1.3 7,-3.1 2,-0.0 8,-1.2 -0.939 73.8 179.4-138.8 118.4 -1.9 25.5 23.4 91 92 A Q E -F 96 0F 123 -2,-0.4 5,-0.2 5,-0.2 2,-0.1 -0.703 31.7-167.6-118.2 164.9 -3.5 24.7 20.1 92 93 A D E > S-F 95 0F 135 3,-1.9 3,-1.5 -2,-0.2 2,-1.5 -0.587 74.4 -70.7-145.0 76.4 -6.9 24.0 18.4 93 94 A G T 3 S- 0 0 60 1,-0.3 3,-0.0 -2,-0.1 -2,-0.0 -0.565 119.9 -8.1 77.0 -89.2 -5.9 22.6 15.0 94 95 A D T 3 S+ 0 0 133 -2,-1.5 2,-0.5 -3,-0.1 -1,-0.3 0.631 118.1 89.5-110.8 -26.4 -4.4 25.6 13.3 95 96 A H E < -F 92 0F 40 -3,-1.5 -3,-1.9 -16,-0.1 2,-0.5 -0.627 65.6-149.6 -78.0 122.1 -5.3 28.3 15.8 96 97 A h E -F 91 0F 4 -16,-2.1 -5,-0.2 -2,-0.5 3,-0.1 -0.809 15.5-179.6 -85.3 126.7 -2.8 28.9 18.5 97 98 A A E + 0 0 54 -7,-3.1 2,-0.3 -2,-0.5 -6,-0.2 0.567 66.1 30.7-102.4 -12.2 -4.5 30.0 21.7 98 99 A A E -F 90 0F 28 -8,-1.2 -9,-2.9 -33,-0.1 -8,-1.3 -0.974 62.8-165.1-154.5 133.4 -1.5 30.4 23.9 99 100 A g E -F 88 0F 26 -35,-0.3 2,-0.4 -2,-0.3 -11,-0.2 -0.852 6.9-153.1-116.9 149.9 2.2 31.4 23.3 100 101 A R E -F 87 0F 154 -13,-2.6 -13,-2.1 -2,-0.3 2,-0.1 -0.987 25.8-117.1-120.9 138.3 5.3 31.1 25.4 101 102 A A E F 86 0F 63 -2,-0.4 -15,-0.3 -15,-0.2 -16,-0.1 -0.446 360.0 360.0 -65.2 141.0 8.3 33.5 25.1 102 103 A Y 0 0 206 -17,-3.0 -1,-0.1 -2,-0.1 -16,-0.0 0.043 360.0 360.0 -64.1 360.0 11.6 31.8 24.0