==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 03-AUG-00 1FI0 . COMPND 2 MOLECULE: VPR PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.ENGLER,T.STANGLER,D.WILLBOLD . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2247.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 90.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 19.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A E > 0 0 173 0, 0.0 4,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 48.8 10.5 1.5 -4.5 2 14 A P H >> + 0 0 100 0, 0.0 4,-0.9 0, 0.0 3,-0.5 0.846 360.0 58.3 -72.7 -35.0 10.7 -0.8 -1.5 3 15 A Y H >> S+ 0 0 137 1,-0.2 4,-3.4 2,-0.2 3,-0.6 0.864 89.0 75.0 -64.5 -33.3 7.4 0.5 -0.1 4 16 A N H 3> S+ 0 0 65 1,-0.3 4,-2.5 2,-0.2 5,-0.3 0.926 99.9 43.0 -45.6 -49.2 5.6 -0.6 -3.3 5 17 A E H < S+ 0 0 52 -4,-0.9 3,-1.2 1,-0.2 4,-0.4 0.950 107.1 42.2 -68.5 -46.1 -0.8 -4.3 2.4 11 23 A L H >X S+ 0 0 84 -4,-3.2 4,-2.6 -3,-0.3 3,-2.1 0.832 95.6 79.2 -70.1 -28.1 -3.9 -3.7 0.2 12 24 A E H 3X S+ 0 0 114 -4,-2.3 4,-1.4 -5,-0.3 -1,-0.3 0.827 93.3 53.1 -49.8 -24.2 -4.0 -7.4 -0.7 13 25 A E H <> S+ 0 0 116 -3,-1.2 4,-1.3 -4,-0.5 -1,-0.3 0.780 106.8 50.7 -81.8 -24.9 -5.6 -7.6 2.8 14 26 A L H <> S+ 0 0 101 -3,-2.1 4,-3.3 -4,-0.4 5,-0.3 0.899 107.0 53.3 -78.3 -39.4 -8.2 -4.9 1.8 15 27 A K H X S+ 0 0 114 -4,-2.6 4,-4.5 1,-0.2 5,-0.3 0.946 106.8 52.1 -60.5 -45.4 -9.1 -6.7 -1.5 16 28 A S H X S+ 0 0 46 -4,-1.4 4,-2.4 -5,-0.3 -1,-0.2 0.934 111.3 48.0 -58.1 -41.4 -9.8 -9.9 0.5 17 29 A E H X S+ 0 0 90 -4,-1.3 4,-2.0 2,-0.2 -2,-0.2 0.985 114.4 44.4 -63.2 -52.9 -12.1 -7.9 2.8 18 30 A A H < S+ 0 0 63 -4,-3.3 3,-0.5 1,-0.3 -2,-0.2 0.955 116.7 46.5 -56.1 -45.4 -13.8 -6.3 -0.2 19 31 A V H < S+ 0 0 102 -4,-4.5 -1,-0.3 -5,-0.3 -2,-0.2 0.854 111.7 52.9 -64.8 -29.0 -13.9 -9.8 -1.8 20 32 A R H < 0 0 167 -4,-2.4 -1,-0.3 -5,-0.3 -2,-0.2 0.755 360.0 360.0 -76.4 -23.1 -15.1 -10.9 1.6 21 33 A H < 0 0 187 -4,-2.0 -3,-0.1 -3,-0.5 -4,-0.0 -0.138 360.0 360.0-140.0 360.0 -17.9 -8.3 1.5