==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 03-AUG-00 1FI7 . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; . AUTHOR L.BANCI,I.BERTINI,G.LIU,J.LU,T.REDDIG,W.TANG,Y.WU,D.ZHU . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7202.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 32.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 41 0, 0.0 2,-0.4 0, 0.0 92,-0.2 0.000 360.0 360.0 360.0 139.1 -4.0 -4.1 -15.0 2 2 A D > - 0 0 70 1,-0.1 4,-2.2 94,-0.0 95,-0.5 -0.666 360.0-151.2 -67.2 130.6 -1.7 -6.9 -16.0 3 3 A V H > S+ 0 0 65 -2,-0.4 4,-2.7 93,-0.2 5,-0.2 0.896 95.9 49.1 -66.8 -42.2 -1.0 -9.3 -13.1 4 4 A E H > S+ 0 0 83 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.977 116.4 39.4 -68.9 -53.1 2.5 -10.2 -14.5 5 5 A K H > S+ 0 0 121 1,-0.2 4,-3.4 2,-0.2 5,-0.2 0.953 115.8 55.4 -56.5 -45.1 3.6 -6.7 -15.0 6 6 A G H X S+ 0 0 0 -4,-2.2 4,-2.9 87,-0.2 -2,-0.2 0.888 107.6 48.8 -50.7 -45.9 1.9 -5.9 -11.7 7 7 A K H X S+ 0 0 85 -4,-2.7 4,-2.5 2,-0.2 -1,-0.2 0.966 114.5 44.4 -57.7 -55.4 3.9 -8.6 -10.0 8 8 A K H X S+ 0 0 110 -4,-2.6 4,-2.6 1,-0.2 -2,-0.2 0.908 112.1 52.7 -62.4 -41.3 7.2 -7.3 -11.4 9 9 A I H X S+ 0 0 17 -4,-3.4 4,-1.9 2,-0.2 5,-0.3 0.957 109.8 48.2 -57.2 -54.5 6.2 -3.7 -10.7 10 10 A F H X>S+ 0 0 10 -4,-2.9 4,-2.5 1,-0.2 5,-2.1 0.923 114.9 46.4 -50.6 -48.2 5.6 -4.6 -7.0 11 11 A V H <5S+ 0 0 78 -4,-2.5 5,-0.2 1,-0.2 -1,-0.2 0.854 116.8 43.8 -62.2 -38.6 8.9 -6.4 -6.9 12 12 A Q H <5S+ 0 0 155 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.622 127.8 28.1 -83.5 -18.2 10.7 -3.5 -8.6 13 13 A K H <5S+ 0 0 85 -4,-1.9 -3,-0.2 -3,-0.4 -2,-0.2 0.819 133.9 9.5-104.1 -59.7 9.0 -0.8 -6.5 14 14 A C T <5S+ 0 0 37 -4,-2.5 4,-0.5 -5,-0.3 -3,-0.2 0.849 84.7 111.1-106.3 -45.9 8.0 -1.9 -3.0 15 15 A A S S- 0 0 111 12,-0.1 3,-2.6 81,-0.0 2,-0.8 -0.981 86.2 -91.2-151.4 162.7 2.0 -12.7 1.0 22 22 A K T 3 S+ 0 0 162 -2,-0.3 3,-0.1 1,-0.3 80,-0.0 -0.550 118.4 28.8 -75.9 99.1 1.4 -15.3 3.7 23 23 A G T 3 S+ 0 0 65 -2,-0.8 -1,-0.3 1,-0.3 2,-0.1 0.139 82.9 152.0 122.6 -11.2 4.7 -15.3 5.8 24 24 A G < - 0 0 14 -3,-2.6 -1,-0.3 1,-0.1 7,-0.3 -0.337 42.6-130.6 -53.5 119.0 5.5 -11.7 5.0 25 25 A K - 0 0 154 -2,-0.1 -6,-0.1 5,-0.1 -1,-0.1 -0.255 15.6-112.0 -74.6 164.3 7.6 -10.4 7.9 26 26 A H + 0 0 125 1,-0.1 -1,-0.1 4,-0.1 -7,-0.1 0.891 61.1 140.9 -69.5 -47.1 6.8 -7.1 9.6 27 27 A K S S- 0 0 129 1,-0.1 -1,-0.1 3,-0.1 -9,-0.1 -0.049 80.8 -48.3 37.2-126.4 9.8 -5.0 8.5 28 28 A T S S+ 0 0 91 -11,-0.3 -1,-0.1 1,-0.2 -10,-0.1 0.828 131.9 50.1-101.2 -55.8 8.7 -1.3 7.7 29 29 A G S S- 0 0 5 -12,-1.2 -1,-0.2 -15,-0.1 -10,-0.1 -0.745 96.0-117.2 -83.0 129.3 5.7 -1.9 5.4 30 30 A P - 0 0 30 0, 0.0 2,-0.9 0, 0.0 -11,-0.3 -0.302 37.6 -90.9 -62.4 150.0 3.3 -4.3 7.0 31 31 A N - 0 0 30 -7,-0.3 -13,-0.1 -13,-0.2 -5,-0.1 -0.526 39.7-151.4 -59.5 102.6 2.7 -7.6 5.1 32 32 A L > + 0 0 40 -2,-0.9 3,-2.1 2,-0.1 2,-0.3 0.265 45.8 140.3 -73.0 13.0 -0.3 -6.3 3.0 33 33 A H T 3 S+ 0 0 67 -12,-0.3 70,-0.2 1,-0.3 69,-0.1 -0.446 75.4 22.1 -55.3 117.1 -1.8 -9.9 2.8 34 34 A G T 3 S+ 0 0 31 68,-1.7 -1,-0.3 -2,-0.3 69,-0.1 0.591 81.6 135.3 90.8 17.9 -5.5 -9.2 3.2 35 35 A L X + 0 0 16 -3,-2.1 3,-0.9 63,-0.1 2,-0.8 0.943 55.8 70.7 -52.5 -57.7 -5.4 -5.5 2.1 36 36 A F T 3 S+ 0 0 50 1,-0.3 24,-0.2 -4,-0.2 -1,-0.1 -0.590 105.6 27.5 -76.1 108.0 -8.5 -5.7 -0.2 37 37 A G T 3 S+ 0 0 74 22,-1.1 2,-0.3 -2,-0.8 -1,-0.3 0.683 106.2 87.2 106.5 37.0 -11.5 -6.1 2.1 38 38 A R S < S- 0 0 137 -3,-0.9 21,-1.4 21,-0.4 -1,-0.5 -0.959 70.0-115.9-153.5 160.9 -10.1 -4.3 5.2 39 39 A K B -A 58 0A 129 -2,-0.3 3,-0.4 19,-0.2 19,-0.2 -0.405 33.6-105.3 -90.5 175.0 -9.9 -0.8 6.7 40 40 A T S S+ 0 0 7 17,-1.2 2,-2.6 1,-0.2 13,-0.2 0.986 111.2 53.6 -64.8 -65.8 -6.8 1.2 7.4 41 41 A G S S+ 0 0 15 11,-0.4 -1,-0.2 12,-0.4 12,-0.1 -0.307 87.3 94.0 -74.0 55.2 -6.4 1.1 11.1 42 42 A Q + 0 0 110 -2,-2.6 -1,-0.2 -3,-0.4 -3,-0.0 -0.457 48.0 157.6-149.1 58.1 -6.6 -2.8 11.1 43 43 A A - 0 0 24 3,-0.2 2,-1.8 1,-0.1 3,-0.3 -0.746 49.2-112.9 -96.9 140.5 -3.0 -4.1 11.0 44 44 A P S S- 0 0 97 0, 0.0 -13,-0.1 0, 0.0 3,-0.1 -0.480 85.3 -45.7 -76.7 84.5 -2.2 -7.7 12.2 45 45 A G S S+ 0 0 79 -2,-1.8 2,-0.3 1,-0.2 -19,-0.1 0.860 105.4 132.3 59.7 39.7 -0.0 -6.9 15.3 46 46 A F - 0 0 48 -3,-0.3 2,-0.7 -20,-0.0 -1,-0.2 -0.922 67.3-103.0-117.0 144.4 2.0 -4.3 13.5 47 47 A T - 0 0 123 -2,-0.3 2,-0.1 -3,-0.1 0, 0.0 -0.589 43.1-159.5 -72.0 109.9 2.7 -0.8 14.9 48 48 A Y - 0 0 116 -2,-0.7 2,-0.3 -5,-0.1 -7,-0.0 -0.406 10.4-124.0 -82.9 163.9 0.4 1.7 13.2 49 49 A T > - 0 0 70 -2,-0.1 4,-1.7 1,-0.0 3,-0.4 -0.822 26.4-111.2-101.0 153.2 0.8 5.5 12.9 50 50 A D T 4 S+ 0 0 154 -2,-0.3 28,-0.1 1,-0.2 -9,-0.0 0.203 116.4 57.7 -62.7 14.5 -1.8 8.1 14.0 51 51 A A T > S+ 0 0 4 -2,-0.1 4,-1.0 3,-0.1 -1,-0.2 0.717 103.3 45.1-111.9 -52.8 -2.3 8.8 10.2 52 52 A N H >> S+ 0 0 34 -3,-0.4 3,-0.9 1,-0.2 4,-0.8 0.952 117.5 45.2 -60.1 -50.2 -3.3 5.4 8.9 53 53 A K H >< S+ 0 0 136 -4,-1.7 3,-0.5 1,-0.2 -12,-0.4 0.897 108.4 57.8 -60.6 -41.8 -5.8 4.8 11.7 54 54 A N H 34 S+ 0 0 135 -5,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.729 94.9 68.3 -60.8 -25.9 -7.2 8.3 11.4 55 55 A K H << S- 0 0 40 -4,-1.0 -1,-0.2 -3,-0.9 -2,-0.2 0.913 73.1-170.8 -64.8 -50.1 -8.1 7.7 7.7 56 56 A G << + 0 0 55 -4,-0.8 2,-0.2 -3,-0.5 -3,-0.1 0.856 36.1 129.9 56.6 46.7 -10.8 5.2 8.4 57 57 A I - 0 0 42 -19,-0.0 -17,-1.2 6,-0.0 2,-0.3 -0.638 55.7-112.1-114.3 174.8 -11.3 4.1 4.7 58 58 A T B -A 39 0A 70 -19,-0.2 2,-0.5 -2,-0.2 -19,-0.2 -0.737 20.8-132.4-100.3 156.0 -11.4 0.8 2.7 59 59 A W + 0 0 22 -21,-1.4 -22,-1.1 -24,-0.4 -21,-0.4 -0.950 51.5 129.1-108.0 128.6 -8.8 -0.4 0.3 60 60 A K S S- 0 0 100 -2,-0.5 -1,-0.1 -24,-0.2 -24,-0.1 0.419 84.7 -78.1-155.7 -11.3 -10.2 -1.7 -3.0 61 61 A E S > S+ 0 0 60 38,-0.0 4,-3.0 0, 0.0 5,-0.1 -0.525 118.0 74.9 134.9 -52.1 -8.2 0.2 -5.9 62 62 A E H > S+ 0 0 127 2,-0.2 4,-1.2 1,-0.2 5,-0.2 0.918 104.5 36.3 -45.4 -60.5 -9.9 3.7 -5.9 63 63 A T H > S+ 0 0 20 1,-0.2 4,-2.7 -5,-0.2 3,-0.4 0.960 117.3 52.9 -66.6 -48.2 -8.2 4.9 -2.7 64 64 A L H > S+ 0 0 10 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.876 100.5 64.5 -44.4 -49.4 -5.0 3.1 -3.4 65 65 A M H X S+ 0 0 64 -4,-3.0 4,-0.7 1,-0.2 -1,-0.2 0.908 112.2 31.9 -48.9 -52.2 -4.9 4.8 -6.9 66 66 A E H >X S+ 0 0 102 -4,-1.2 3,-1.7 -3,-0.4 4,-1.4 0.970 115.9 58.2 -72.6 -51.6 -4.5 8.3 -5.4 67 67 A Y H >< S+ 0 0 50 -4,-2.7 3,-1.0 1,-0.3 -2,-0.2 0.878 104.5 51.0 -43.3 -53.6 -2.6 7.2 -2.4 68 68 A L H 3< S+ 0 0 49 -4,-3.1 17,-0.3 1,-0.3 -1,-0.3 0.722 120.1 35.8 -63.9 -24.3 0.2 5.6 -4.5 69 69 A E H << S+ 0 0 78 -3,-1.7 -1,-0.3 -4,-0.7 -2,-0.2 0.456 130.7 32.4 -96.7 -8.8 0.6 8.8 -6.6 70 70 A N XX + 0 0 56 -4,-1.4 4,-1.5 -3,-1.0 3,-0.9 -0.346 60.9 149.2-152.3 56.7 -0.1 11.2 -3.7 71 71 A P H 3> S+ 0 0 15 0, 0.0 2,-1.2 0, 0.0 4,-1.0 0.950 82.2 51.3 -62.5 -45.5 1.2 9.8 -0.4 72 72 A K H 34 S+ 0 0 87 1,-0.2 -5,-0.0 11,-0.2 11,-0.0 -0.268 108.8 55.2 -84.0 48.0 1.8 13.4 0.8 73 73 A K H <4 S+ 0 0 152 -2,-1.2 -1,-0.2 -3,-0.9 -6,-0.1 0.435 96.9 53.2-145.4 -49.1 -1.7 14.4 -0.1 74 74 A Y H < S- 0 0 82 -4,-1.5 -2,-0.1 1,-0.3 -7,-0.0 0.898 136.5 -10.6 -57.5 -43.0 -4.1 12.1 1.7 75 75 A I < - 0 0 38 -4,-1.0 2,-2.0 0, 0.0 -1,-0.3 -0.801 61.4-142.0-162.1 117.8 -2.3 12.9 4.9 76 76 A P S S+ 0 0 126 0, 0.0 -4,-0.1 0, 0.0 -2,-0.0 -0.357 90.0 65.8 -82.8 62.2 1.0 14.9 5.4 77 77 A G S S+ 0 0 51 -2,-2.0 -5,-0.0 -28,-0.0 -26,-0.0 -0.122 73.4 88.5-170.3 58.0 2.3 12.7 8.3 78 78 A T S S- 0 0 26 -3,-0.2 -27,-0.1 -27,-0.1 -26,-0.1 0.673 104.4 -75.9-127.6 -67.8 2.9 9.2 6.9 79 79 A K - 0 0 127 2,-0.0 -7,-0.1 -8,-0.0 0, 0.0 0.110 49.9-147.8-174.8 -31.5 6.5 8.9 5.5 80 80 A M + 0 0 119 -9,-0.0 3,-0.1 3,-0.0 0, 0.0 0.963 29.5 165.4 55.9 83.8 6.2 10.8 2.1 81 81 A I - 0 0 114 1,-0.3 -9,-0.0 2,-0.1 -2,-0.0 0.583 43.6 -4.2 -99.0-118.2 8.6 9.0 -0.3 82 82 A F S S- 0 0 102 1,-0.1 -1,-0.3 -11,-0.0 3,-0.1 -0.182 75.5 -99.8 -78.5 172.2 8.9 9.2 -4.1 83 83 A A S S- 0 0 75 1,-0.2 2,-0.3 2,-0.1 -11,-0.2 0.946 80.4 -62.1 -58.4 -53.6 6.5 11.3 -6.2 84 84 A G - 0 0 16 1,-0.2 -1,-0.2 -14,-0.1 -15,-0.2 -0.915 62.3 -68.4 176.9 179.5 4.3 8.4 -7.4 85 85 A I S S- 0 0 14 -17,-0.3 -1,-0.2 -2,-0.3 3,-0.1 0.957 78.7 -80.3 -54.7 -81.5 4.6 5.1 -9.3 86 86 A K S S- 0 0 133 1,-0.7 2,-0.2 -3,-0.1 -1,-0.1 0.184 87.7 -47.9-148.7 -50.7 5.3 6.2 -13.0 87 87 A K S > S- 0 0 115 0, 0.0 -1,-0.7 0, 0.0 4,-0.6 -0.777 76.2 -68.3-166.4-153.2 1.8 7.1 -14.3 88 88 A K H > S+ 0 0 150 -2,-0.2 4,-2.8 2,-0.1 5,-0.2 0.851 119.1 65.4 -87.5 -37.4 -1.6 5.3 -14.1 89 89 A T H >> S+ 0 0 78 1,-0.2 4,-2.6 2,-0.2 3,-0.6 0.958 107.9 37.9 -49.5 -70.5 -0.8 2.3 -16.4 90 90 A E H 3> S+ 0 0 33 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.841 115.8 55.2 -45.4 -46.5 1.9 0.7 -14.2 91 91 A R H 3X S+ 0 0 14 -4,-0.6 4,-2.6 2,-0.2 -1,-0.2 0.912 108.7 47.2 -58.7 -42.9 -0.1 1.6 -11.1 92 92 A E H X S+ 0 0 32 -4,-2.2 4,-2.6 -95,-0.5 3,-0.9 0.985 114.3 54.4 -57.9 -58.4 -1.3 -8.1 -9.1 98 98 A L H 3X S+ 0 0 7 -4,-3.0 4,-2.9 1,-0.3 5,-0.5 0.858 100.6 59.5 -45.0 -50.0 -2.2 -6.8 -5.6 99 99 A K H 3X S+ 0 0 87 -4,-3.2 4,-0.7 2,-0.2 -1,-0.3 0.884 117.8 32.3 -43.7 -52.5 -5.9 -7.9 -6.0 100 100 A K H XX S+ 0 0 130 -4,-1.2 4,-2.8 -3,-0.9 3,-1.2 0.994 120.5 49.8 -65.2 -64.2 -4.6 -11.5 -6.4 101 101 A A H 3< S+ 0 0 3 -4,-2.6 -3,-0.2 1,-0.3 -2,-0.2 0.814 110.1 47.4 -54.7 -49.2 -1.5 -11.4 -4.2 102 102 A T H 3< S+ 0 0 1 -4,-2.9 -68,-1.7 -5,-0.2 -1,-0.3 0.838 118.2 43.3 -63.6 -33.2 -3.1 -9.8 -1.1 103 103 A N H << 0 0 130 -3,-1.2 -2,-0.2 -4,-0.7 -1,-0.2 0.981 360.0 360.0 -70.7 -61.2 -6.0 -12.4 -1.3 104 104 A E < 0 0 185 -4,-2.8 -3,-0.2 -5,-0.1 -82,-0.1 0.043 360.0 360.0-165.0 360.0 -3.5 -15.2 -2.1