==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 03-AUG-00 1FI9 . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; . AUTHOR L.BANCI,I.BERTINI,G.LIU,J.LU,T.REDDIG,W.TANG,Y.WU,D.ZHU . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6946.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 42 0, 0.0 2,-0.5 0, 0.0 92,-0.1 0.000 360.0 360.0 360.0 135.0 -4.0 -4.2 -15.1 2 2 A D > - 0 0 69 1,-0.2 4,-2.6 94,-0.0 95,-0.4 -0.662 360.0-156.8 -68.3 124.9 -1.5 -6.9 -16.1 3 3 A V H > S+ 0 0 62 -2,-0.5 4,-2.7 93,-0.2 5,-0.2 0.884 94.6 53.3 -63.5 -41.1 -0.9 -9.3 -13.2 4 4 A E H > S+ 0 0 98 2,-0.2 4,-1.9 1,-0.2 5,-0.2 0.970 115.9 35.9 -64.8 -56.2 2.5 -10.2 -14.8 5 5 A K H > S+ 0 0 123 1,-0.2 4,-3.4 2,-0.2 5,-0.2 0.963 115.7 58.2 -58.5 -47.5 3.7 -6.6 -15.1 6 6 A G H X S+ 0 0 0 -4,-2.6 4,-2.9 1,-0.2 -2,-0.2 0.855 104.9 50.5 -46.4 -45.4 2.0 -5.9 -11.7 7 7 A K H X S+ 0 0 89 -4,-2.7 4,-2.2 2,-0.2 -1,-0.2 0.963 114.7 42.1 -58.1 -55.4 4.1 -8.6 -10.1 8 8 A K H X S+ 0 0 93 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.918 112.7 54.0 -63.8 -43.0 7.3 -7.2 -11.4 9 9 A I H >X S+ 0 0 7 -4,-3.4 4,-1.0 2,-0.2 3,-0.9 0.961 108.3 49.4 -54.0 -56.4 6.2 -3.6 -10.7 10 10 A F H >X>S+ 0 0 11 -4,-2.9 4,-2.7 1,-0.3 5,-1.4 0.916 115.1 45.0 -47.2 -48.0 5.5 -4.5 -7.0 11 11 A V H 3<5S+ 0 0 76 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.713 116.7 45.7 -68.9 -25.1 9.0 -6.2 -6.9 12 12 A Q H <<5S+ 0 0 140 -4,-1.8 -1,-0.2 -3,-0.9 -2,-0.2 0.382 125.8 29.2 -99.3 -4.0 10.6 -3.1 -8.7 13 13 A K H <<5S+ 0 0 95 -4,-1.0 -2,-0.2 -3,-0.9 -3,-0.2 0.667 137.1 3.7-115.8 -55.1 8.9 -0.5 -6.5 14 14 A C T <5S+ 0 0 39 -4,-2.7 2,-0.5 -5,-0.3 -3,-0.2 0.867 81.5 118.3-108.8 -68.2 8.1 -1.9 -3.0 15 15 A A S S- 0 0 100 82,-0.1 3,-1.0 12,-0.0 12,-0.3 -0.949 91.3 -65.7-159.6 171.2 1.6 -12.7 1.0 22 22 A K T 3 S+ 0 0 136 -2,-0.3 10,-0.1 1,-0.2 80,-0.0 -0.336 115.7 16.0 -67.1 149.1 1.7 -15.1 4.0 23 23 A G T 3 S+ 0 0 63 1,-0.1 -1,-0.2 8,-0.1 3,-0.1 0.728 76.6 152.0 63.7 26.2 4.6 -15.0 6.4 24 24 A G < - 0 0 8 -3,-1.0 3,-0.4 1,-0.2 -1,-0.1 0.426 43.7-142.3 -70.5 3.1 5.7 -11.6 5.0 25 25 A K - 0 0 151 1,-0.2 6,-0.5 6,-0.1 -1,-0.2 -0.133 21.0 -88.0 59.5-164.6 7.3 -10.6 8.3 26 26 A H + 0 0 113 4,-0.1 -1,-0.2 -3,-0.1 21,-0.1 -0.598 66.0 139.6-143.9 68.9 7.1 -7.1 9.7 27 27 A K S S- 0 0 115 2,-0.5 -9,-0.1 -3,-0.4 -2,-0.1 0.949 82.7 -52.9 -78.5 -81.8 10.1 -5.0 8.3 28 28 A T S S+ 0 0 107 -11,-0.6 -10,-0.1 1,-0.4 -11,-0.1 0.569 124.7 56.2-126.1 -60.7 8.7 -1.5 7.5 29 29 A G S S- 0 0 8 -12,-0.8 -2,-0.5 1,-0.1 -1,-0.4 -0.553 94.7-110.5 -71.0 137.5 5.6 -2.0 5.2 30 30 A P - 0 0 41 0, 0.0 2,-0.9 0, 0.0 -11,-0.3 -0.424 38.1 -97.3 -64.6 145.0 3.0 -4.2 6.8 31 31 A N - 0 0 34 -6,-0.5 2,-1.8 -13,-0.2 -13,-0.1 -0.558 38.2-147.3 -61.9 103.5 2.6 -7.5 5.1 32 32 A L > + 0 0 43 -2,-0.9 2,-2.6 1,-0.1 3,-1.1 -0.013 44.1 147.1 -78.6 39.8 -0.4 -6.5 3.0 33 33 A H T 3 S+ 0 0 59 -2,-1.8 -1,-0.1 -12,-0.3 69,-0.1 -0.327 76.8 20.8 -79.6 61.0 -2.0 -10.0 3.0 34 34 A G T 3 S+ 0 0 20 -2,-2.6 -1,-0.3 4,-0.0 3,-0.1 0.439 73.7 137.0 147.2 45.8 -5.6 -8.8 2.9 35 35 A L X + 0 0 9 -3,-1.1 2,-2.0 1,-0.2 3,-0.7 0.982 65.7 64.9 -71.1 -60.1 -5.6 -5.2 1.6 36 36 A F T 3 S+ 0 0 30 1,-0.2 -1,-0.2 62,-0.2 24,-0.1 -0.471 111.4 29.1 -68.0 81.2 -8.6 -5.7 -0.7 37 37 A G T 3 S+ 0 0 57 -2,-2.0 2,-0.3 22,-0.7 -1,-0.2 0.594 100.3 81.8 133.1 53.3 -11.3 -6.3 2.0 38 38 A R < - 0 0 150 -3,-0.7 21,-1.3 21,-0.3 -1,-0.4 -0.957 68.6-109.7-162.3 160.7 -10.3 -4.5 5.3 39 39 A K B -A 58 0A 145 -2,-0.3 3,-0.2 19,-0.2 19,-0.2 -0.463 41.4 -97.7 -89.4 169.6 -10.6 -1.1 6.9 40 40 A T S S+ 0 0 12 17,-1.6 -1,-0.2 1,-0.2 13,-0.1 -0.195 95.2 40.8 -80.7 177.0 -7.6 1.3 7.5 41 41 A G S S+ 0 0 9 1,-0.2 2,-0.3 -2,-0.0 -1,-0.2 0.868 94.9 98.3 46.1 50.1 -5.6 1.8 10.8 42 42 A Q + 0 0 85 -3,-0.2 -1,-0.2 2,-0.0 7,-0.1 -0.967 38.5 160.2-156.8 149.2 -5.6 -1.9 11.7 43 43 A A - 0 0 30 -2,-0.3 2,-1.3 3,-0.1 3,-0.5 -0.941 49.8 -90.5-167.5 151.4 -3.1 -4.8 11.3 44 44 A P S S- 0 0 112 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.590 99.2 -38.3 -74.6 95.9 -2.4 -8.2 12.9 45 45 A G S S+ 0 0 76 -2,-1.3 2,-0.3 1,-0.2 -3,-0.0 0.943 105.5 129.1 55.8 60.5 -0.1 -7.4 15.8 46 46 A F - 0 0 42 -3,-0.5 2,-1.1 -16,-0.0 -1,-0.2 -0.988 69.8-100.9-146.4 142.7 2.0 -4.8 14.0 47 47 A T - 0 0 133 -2,-0.3 2,-0.1 -21,-0.1 0, 0.0 -0.578 50.9-173.5 -70.1 97.5 3.1 -1.2 14.9 48 48 A Y - 0 0 125 -2,-1.1 2,-0.3 -5,-0.1 3,-0.1 -0.285 20.3-110.0 -85.6 173.5 0.5 0.9 12.8 49 49 A T > - 0 0 61 1,-0.1 4,-1.4 -2,-0.1 5,-0.1 -0.795 8.0-136.1-106.9 151.3 0.4 4.7 12.3 50 50 A D H > S+ 0 0 126 -2,-0.3 4,-2.7 1,-0.2 5,-0.2 0.937 105.1 60.9 -65.8 -47.3 -2.1 7.2 13.6 51 51 A A H > S+ 0 0 18 26,-0.3 4,-0.6 1,-0.2 -1,-0.2 0.830 102.5 52.2 -50.6 -40.3 -2.3 9.0 10.2 52 52 A N H >> S+ 0 0 29 2,-0.2 3,-1.6 1,-0.2 4,-1.1 0.954 109.3 47.8 -62.6 -48.8 -3.6 5.7 8.7 53 53 A K H 3< S+ 0 0 117 -4,-1.4 3,-0.2 1,-0.3 -2,-0.2 0.908 104.9 61.4 -57.8 -39.2 -6.3 5.4 11.3 54 54 A N H 3< S+ 0 0 122 -4,-2.7 -1,-0.3 1,-0.2 -2,-0.2 0.697 96.2 61.9 -58.1 -22.2 -7.1 9.0 10.6 55 55 A K H << S- 0 0 29 -3,-1.6 -1,-0.2 -4,-0.6 -2,-0.2 0.964 78.5-174.1 -68.4 -54.4 -7.9 7.9 7.0 56 56 A G < + 0 0 58 -4,-1.1 2,-0.2 -3,-0.2 -3,-0.1 0.891 35.5 123.0 61.3 47.7 -10.7 5.6 8.1 57 57 A I - 0 0 44 -5,-0.3 -17,-1.6 -19,-0.0 2,-0.4 -0.477 64.0-102.1-122.1-172.0 -11.4 4.1 4.6 58 58 A T B -A 39 0A 63 -19,-0.2 2,-0.5 -2,-0.2 5,-0.2 -0.984 32.1-127.3-118.9 127.3 -11.5 0.7 2.8 59 59 A W + 0 0 24 -21,-1.3 -22,-0.7 -2,-0.4 -21,-0.3 -0.677 52.2 137.6 -79.0 122.5 -8.6 -0.3 0.6 60 60 A K S S- 0 0 97 -2,-0.5 2,-2.5 -24,-0.1 -1,-0.1 -0.060 75.1 -92.8-162.5 45.3 -9.9 -1.2 -2.9 61 61 A E S > S+ 0 0 55 1,-0.2 4,-3.5 34,-0.0 5,-0.2 -0.459 122.4 70.4 65.9 -67.1 -7.7 0.1 -5.7 62 62 A E T 4 S+ 0 0 121 -2,-2.5 4,-0.4 1,-0.2 -1,-0.2 0.782 107.9 37.2 -47.9 -35.7 -9.8 3.3 -6.0 63 63 A T T >> S+ 0 0 17 -5,-0.2 3,-1.7 2,-0.2 4,-1.3 0.946 116.7 47.6 -80.2 -59.7 -8.4 4.4 -2.6 64 64 A L H 3> S+ 0 0 6 1,-0.3 4,-3.0 2,-0.2 5,-0.3 0.849 95.6 80.5 -53.0 -33.8 -4.8 3.2 -2.9 65 65 A M H 3< S+ 0 0 15 -4,-3.5 -1,-0.3 1,-0.2 4,-0.2 0.799 101.0 35.1 -40.2 -45.8 -4.8 4.8 -6.4 66 66 A E H X4 S+ 0 0 64 -3,-1.7 3,-2.2 -4,-0.4 -1,-0.2 0.943 114.5 56.6 -77.6 -47.5 -4.1 8.2 -4.8 67 67 A Y H >< S+ 0 0 49 -4,-1.3 3,-1.0 1,-0.3 -2,-0.2 0.869 108.0 48.1 -50.9 -43.5 -1.9 6.9 -1.9 68 68 A L T 3< S+ 0 0 53 -4,-3.0 17,-2.1 1,-0.2 -1,-0.3 0.569 125.9 30.2 -74.2 -12.5 0.5 5.3 -4.5 69 69 A E T < S+ 0 0 52 -3,-2.2 -1,-0.2 -5,-0.3 -2,-0.2 -0.066 130.2 35.4-135.1 32.8 0.6 8.5 -6.5 70 70 A N X> + 0 0 54 -3,-1.0 3,-1.2 -4,-0.1 4,-1.0 -0.096 58.5 159.5 179.4 57.0 0.1 11.1 -3.7 71 71 A P T 34 S+ 0 0 14 0, 0.0 6,-0.3 0, 0.0 9,-0.3 0.676 82.7 46.6 -71.0 -15.3 1.8 9.9 -0.5 72 72 A K T 34 S+ 0 0 100 11,-0.2 -5,-0.0 4,-0.1 11,-0.0 -0.347 104.5 63.0-116.6 48.5 1.7 13.5 0.8 73 73 A K T <4 S+ 0 0 113 -3,-1.2 -6,-0.1 2,-0.2 -1,-0.0 0.560 91.0 54.3-129.6 -57.4 -1.9 14.4 -0.1 74 74 A Y S < S- 0 0 87 -4,-1.0 -2,-0.1 1,-0.2 -7,-0.0 0.867 134.4 -11.5 -49.2 -45.8 -4.3 12.1 1.9 75 75 A I - 0 0 32 -4,-0.2 2,-2.4 0, 0.0 -1,-0.2 -0.858 66.5-128.6-159.7 121.9 -2.6 13.2 5.1 76 76 A P S S+ 0 0 125 0, 0.0 -4,-0.1 0, 0.0 -2,-0.0 -0.388 93.8 70.7 -76.7 68.5 0.7 15.2 5.5 77 77 A G + 0 0 48 -2,-2.4 -26,-0.3 -6,-0.3 -5,-0.1 -0.068 66.3 102.8-171.0 54.8 2.3 12.7 8.0 78 78 A T S S- 0 0 39 -7,-0.1 -6,-0.1 -3,-0.1 -27,-0.1 0.576 89.6 -84.0-101.5-109.4 3.2 9.5 6.1 79 79 A K - 0 0 131 -8,-0.2 -7,-0.1 0, 0.0 0, 0.0 0.379 45.3-151.2-140.3 -26.2 6.8 8.7 5.0 80 80 A M + 0 0 108 -9,-0.3 3,-0.1 1,-0.1 -8,-0.0 0.928 27.3 165.6 50.7 71.1 7.0 10.7 1.7 81 81 A I - 0 0 132 1,-0.1 2,-0.2 2,-0.1 -1,-0.1 0.820 58.0 -34.2 -87.0 -31.8 9.5 8.6 -0.3 82 82 A F S S- 0 0 97 1,-0.2 -1,-0.1 3,-0.0 3,-0.1 -0.885 74.6 -70.8-164.3-170.2 9.0 10.0 -3.8 83 83 A A S S- 0 0 73 1,-0.3 2,-0.3 -2,-0.2 -11,-0.2 0.988 79.7-105.2 -59.8 -63.0 6.4 11.4 -6.2 84 84 A G - 0 0 9 -15,-0.1 -15,-0.3 -14,-0.1 -1,-0.3 -0.961 57.1 -18.1 158.8-174.4 4.6 8.1 -6.8 85 85 A I S S- 0 0 10 -17,-2.1 3,-0.1 -2,-0.3 -72,-0.0 -0.107 71.6-100.3 -55.1 160.1 4.1 5.3 -9.4 86 86 A K S S- 0 0 137 1,-0.2 2,-0.3 2,-0.1 -1,-0.1 0.850 86.4 -47.8 -53.5 -47.5 5.1 6.1 -13.0 87 87 A K > - 0 0 108 1,-0.1 4,-2.4 0, 0.0 3,-0.3 -0.941 66.8 -72.9-174.1 179.7 1.5 6.7 -14.0 88 88 A K H > S+ 0 0 134 -2,-0.3 4,-3.1 1,-0.2 5,-0.2 0.847 123.3 62.1 -57.0 -41.3 -2.1 5.3 -13.8 89 89 A T H > S+ 0 0 96 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.944 109.6 39.5 -47.6 -58.8 -1.2 2.5 -16.3 90 90 A E H > S+ 0 0 29 -3,-0.3 4,-3.2 1,-0.2 -1,-0.2 0.902 112.9 56.2 -60.5 -46.5 1.4 1.1 -14.0 91 91 A R H X S+ 0 0 35 -4,-2.4 4,-2.9 2,-0.2 -2,-0.2 0.930 108.2 48.9 -50.6 -48.0 -0.8 1.7 -10.9 92 92 A E H X S+ 0 0 84 -4,-3.1 4,-2.8 2,-0.2 -2,-0.2 0.964 112.0 46.9 -59.3 -56.4 -3.5 -0.4 -12.6 93 93 A D H X S+ 0 0 30 -4,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.934 112.1 52.5 -48.0 -52.5 -1.1 -3.3 -13.4 94 94 A L H X S+ 0 0 3 -4,-3.2 4,-2.8 1,-0.2 -2,-0.2 0.936 109.7 47.7 -49.2 -56.7 0.2 -3.0 -9.8 95 95 A I H X S+ 0 0 3 -4,-2.9 4,-3.3 1,-0.2 -1,-0.2 0.900 105.2 60.8 -50.9 -48.3 -3.3 -3.3 -8.4 96 96 A A H X S+ 0 0 13 -4,-2.8 4,-1.0 2,-0.2 -93,-0.2 0.911 111.4 38.4 -51.9 -48.7 -4.0 -6.3 -10.8 97 97 A Y H >X S+ 0 0 45 -4,-2.0 4,-2.5 -95,-0.4 3,-1.2 0.991 116.0 53.1 -58.1 -61.7 -1.2 -8.2 -9.1 98 98 A L H 3X S+ 0 0 9 -4,-2.8 4,-2.6 1,-0.3 5,-0.5 0.835 100.0 60.8 -42.5 -52.5 -2.1 -6.9 -5.6 99 99 A K H 3X S+ 0 0 118 -4,-3.3 4,-0.6 2,-0.2 -1,-0.3 0.854 119.8 28.9 -43.9 -49.3 -5.8 -8.0 -5.9 100 100 A K H X< S+ 0 0 134 -3,-1.2 3,-1.5 -4,-1.0 -2,-0.2 0.980 120.2 53.3 -69.8 -68.2 -4.6 -11.5 -6.2 101 101 A A H >< S+ 0 0 7 -4,-2.5 3,-2.3 1,-0.3 -3,-0.2 0.769 108.7 47.2 -45.4 -54.1 -1.4 -11.4 -4.3 102 102 A T H 3< S+ 0 0 1 -4,-2.6 -1,-0.3 1,-0.3 -3,-0.1 0.868 121.6 38.1 -55.7 -41.1 -2.8 -9.9 -1.1 103 103 A N T << 0 0 94 -3,-1.5 -1,-0.3 -4,-0.6 -2,-0.3 0.134 360.0 360.0 -93.2 16.1 -5.6 -12.5 -1.2 104 104 A E < 0 0 173 -3,-2.3 -3,-0.2 -84,-0.3 -4,-0.1 -0.341 360.0 360.0 76.7 360.0 -3.0 -15.1 -2.5