==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-DEC-05 2FJ6 . COMPND 2 MOLECULE: HYPOTHETICAL UPF0346 PROTEIN YOZE; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR P.ROSSI,T.B.ACTON,K.E.CUNNINGHAM,L.C.MA,K.SHETTY, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6161.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 74.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 42.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 165 0, 0.0 2,-0.2 0, 0.0 67,-0.0 0.000 360.0 360.0 360.0 164.5 -5.5 8.5 6.5 2 2 A K > - 0 0 86 36,-0.0 5,-0.6 0, 0.0 69,-0.0 -0.745 360.0 -77.2-150.6 97.0 -7.9 6.4 4.3 3 3 A S T >>5 - 0 0 26 -2,-0.2 4,-2.5 1,-0.2 3,-1.0 0.621 39.1-136.2 9.1 104.3 -8.0 2.6 4.8 4 4 A F H 3>5S+ 0 0 2 1,-0.3 4,-2.6 2,-0.2 -1,-0.2 0.820 105.7 59.6 -47.7 -33.1 -4.9 1.3 3.1 5 5 A Y H 3>5S+ 0 0 15 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.925 107.5 43.1 -63.0 -45.4 -7.1 -1.4 1.6 6 6 A H H <>5S+ 0 0 102 -3,-1.0 4,-0.8 2,-0.2 -2,-0.2 0.900 111.2 54.0 -68.4 -40.9 -9.3 1.2 -0.1 7 7 A Y H ><< S+ 0 0 7 -4,-2.6 3,-2.2 1,-0.3 -1,-0.3 0.776 96.9 73.1 -60.0 -29.0 -5.1 0.1 -2.8 9 9 A L H >< S+ 0 0 66 -4,-1.1 3,-0.9 1,-0.3 -1,-0.3 0.780 88.1 62.2 -59.0 -24.9 -8.6 -0.4 -4.3 10 10 A K T << S+ 0 0 172 -3,-1.7 -1,-0.3 -4,-0.8 -2,-0.2 0.688 102.7 51.6 -72.9 -17.8 -7.7 2.4 -6.7 11 11 A Y T < + 0 0 86 -3,-2.2 -1,-0.3 -4,-0.3 -2,-0.1 -0.275 61.5 144.5-112.6 44.5 -4.9 0.2 -8.0 12 12 A R < - 0 0 150 -3,-0.9 -1,-0.1 12,-0.1 -2,-0.1 0.601 45.5-154.8 -58.3 -7.0 -6.9 -2.9 -8.7 13 13 A H - 0 0 38 1,-0.2 12,-0.1 -3,-0.1 -2,-0.1 0.834 13.0-164.5 27.8 78.9 -4.5 -3.2 -11.6 14 14 A P S S+ 0 0 126 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.531 88.2 41.5 -65.5 -2.1 -6.8 -5.2 -14.0 15 15 A K S S- 0 0 158 6,-0.0 -2,-0.1 0, 0.0 7,-0.1 -0.588 91.9-146.0-145.9 74.8 -3.5 -5.9 -15.9 16 16 A P + 0 0 69 0, 0.0 3,-0.1 0, 0.0 -4,-0.0 -0.044 42.0 136.0 -43.9 139.8 -0.6 -6.5 -13.4 17 17 A K + 0 0 169 1,-0.5 2,-0.1 0, 0.0 -4,-0.0 0.311 53.2 56.5-150.7 -60.0 2.8 -5.2 -14.5 18 18 A D S > S- 0 0 95 1,-0.1 4,-2.2 4,-0.0 -1,-0.5 -0.394 89.3-105.5 -83.1 163.2 4.7 -3.5 -11.8 19 19 A S H > S+ 0 0 55 1,-0.3 4,-1.7 2,-0.2 5,-0.1 0.897 124.5 48.2 -53.6 -43.9 5.6 -5.1 -8.4 20 20 A I H > S+ 0 0 34 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.834 108.1 56.7 -66.5 -33.2 2.9 -2.9 -6.7 21 21 A S H > S+ 0 0 0 -3,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.953 107.4 45.1 -64.4 -51.1 0.4 -3.9 -9.4 22 22 A E H X S+ 0 0 98 -4,-2.2 4,-1.7 1,-0.2 -1,-0.2 0.885 113.3 52.6 -60.2 -38.5 0.7 -7.7 -8.9 23 23 A F H X S+ 0 0 3 -4,-1.7 4,-3.2 -5,-0.3 5,-0.2 0.903 103.2 58.0 -63.2 -42.8 0.5 -7.1 -5.1 24 24 A A H X S+ 0 0 4 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.928 106.1 47.7 -54.0 -50.2 -2.7 -5.1 -5.5 25 25 A N H X S+ 0 0 37 -4,-1.7 4,-0.7 1,-0.2 -1,-0.2 0.899 113.4 49.4 -59.1 -40.9 -4.5 -8.0 -7.2 26 26 A Q H >< S+ 0 0 44 -4,-1.7 3,-1.5 1,-0.2 4,-0.4 0.947 109.2 50.4 -63.0 -50.1 -3.2 -10.3 -4.4 27 27 A A H >< S+ 0 0 1 -4,-3.2 3,-1.8 1,-0.3 6,-0.2 0.831 99.6 66.8 -57.7 -33.7 -4.3 -7.9 -1.7 28 28 A Y H 3< S+ 0 0 111 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.817 100.5 49.7 -57.9 -30.3 -7.8 -7.8 -3.3 29 29 A E T << S+ 0 0 146 -3,-1.5 2,-2.1 -4,-0.7 -1,-0.3 0.542 85.0 97.9 -85.3 -7.4 -8.2 -11.4 -2.4 30 30 A D X + 0 0 7 -3,-1.8 3,-2.2 -4,-0.4 -1,-0.2 -0.482 42.2 163.4 -81.4 71.0 -7.1 -10.6 1.2 31 31 A H T 3 S+ 0 0 139 -2,-2.1 -1,-0.2 1,-0.3 4,-0.1 0.643 76.0 56.7 -63.8 -13.0 -10.7 -10.5 2.5 32 32 A S T 3 S+ 0 0 83 -3,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.451 77.0 132.7 -96.7 -2.9 -9.1 -10.8 6.0 33 33 A F S < S- 0 0 12 -3,-2.2 2,-2.9 -6,-0.2 3,-0.2 -0.166 74.0-106.4 -49.1 138.1 -6.9 -7.7 5.4 34 34 A P > + 0 0 26 0, 0.0 3,-1.4 0, 0.0 -30,-0.2 -0.350 54.6 161.8 -69.4 68.1 -7.0 -5.4 8.5 35 35 A K T 3 S+ 0 0 83 -2,-2.9 -30,-0.2 1,-0.3 -29,-0.1 0.843 74.6 51.9 -57.9 -35.0 -9.2 -2.8 6.7 36 36 A T T 3 S+ 0 0 142 -3,-0.2 -1,-0.3 1,-0.2 2,-0.1 -0.187 113.3 47.2 -96.5 41.2 -10.1 -1.4 10.1 37 37 A S < - 0 0 41 -3,-1.4 2,-0.6 -2,-0.1 -1,-0.2 -0.537 58.4-179.5 179.4 107.4 -6.5 -1.0 11.2 38 38 A T + 0 0 52 -2,-0.1 2,-0.4 -3,-0.1 3,-0.1 -0.921 21.6 144.5-121.6 107.7 -3.6 0.4 9.3 39 39 A D >> - 0 0 61 -2,-0.6 4,-3.3 1,-0.1 5,-0.5 -0.984 46.1-137.8-144.4 127.6 -0.2 0.4 11.1 40 40 A Y H >5S+ 0 0 86 -2,-0.4 4,-2.4 1,-0.2 5,-0.1 0.914 106.6 40.7 -48.1 -53.6 3.2 -0.1 9.5 41 41 A H H >5S+ 0 0 132 2,-0.2 4,-2.1 3,-0.2 -1,-0.2 0.943 118.8 44.7 -63.3 -51.3 4.4 -2.4 12.4 42 42 A E H >5S+ 0 0 98 1,-0.2 4,-1.4 2,-0.2 -2,-0.2 0.947 120.4 39.3 -59.7 -52.0 1.1 -4.4 12.7 43 43 A I H X5S+ 0 0 0 -4,-3.3 4,-1.6 2,-0.2 -1,-0.2 0.865 109.8 62.0 -68.1 -35.3 0.6 -4.8 9.0 44 44 A S H >X S- 0 0 67 -3,-1.9 3,-2.1 -5,-0.1 4,-1.4 -0.960 74.4-138.5-147.7 125.1 2.8 -15.7 5.8 51 51 A A H 3> S+ 0 0 73 -2,-0.3 4,-1.3 1,-0.3 -1,-0.1 0.703 98.3 79.3 -50.7 -22.1 5.4 -16.6 3.3 52 52 A D H 34 S+ 0 0 105 1,-0.2 -1,-0.3 2,-0.2 -4,-0.1 0.883 106.8 26.4 -56.7 -41.0 2.9 -15.5 0.7 53 53 A Y H X4 S+ 0 0 27 -3,-2.1 3,-2.3 -6,-0.7 -1,-0.2 0.635 105.3 81.4 -95.5 -18.4 3.8 -11.9 1.3 54 54 A L H >< S+ 0 0 99 -4,-1.4 3,-1.0 -7,-0.5 4,-0.2 0.840 87.8 56.8 -54.5 -36.9 7.3 -12.6 2.4 55 55 A H T 3< S+ 0 0 141 -4,-1.3 -1,-0.3 1,-0.2 -2,-0.1 0.386 115.4 37.8 -78.5 5.3 8.4 -12.9 -1.2 56 56 A T T X> S+ 0 0 8 -3,-2.3 4,-1.5 2,-0.1 3,-0.8 0.002 71.2 123.2-144.5 31.5 7.1 -9.4 -1.8 57 57 A M H <> S+ 0 0 32 -3,-1.0 4,-2.3 1,-0.3 5,-0.2 0.887 74.8 60.4 -61.2 -38.7 8.0 -7.5 1.3 58 58 A A H 3> S+ 0 0 77 1,-0.2 4,-1.5 -4,-0.2 -1,-0.3 0.798 102.6 53.4 -59.1 -29.7 10.0 -5.0 -0.8 59 59 A T H <> S+ 0 0 12 -3,-0.8 4,-3.0 2,-0.2 -1,-0.2 0.925 106.9 49.1 -72.7 -45.5 6.7 -4.2 -2.6 60 60 A F H X S+ 0 0 2 -4,-1.5 4,-3.1 2,-0.2 5,-0.2 0.950 111.0 50.0 -58.5 -50.4 4.7 -3.4 0.6 61 61 A D H X S+ 0 0 59 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.901 113.4 47.0 -54.4 -43.0 7.5 -1.1 1.9 62 62 A E H X S+ 0 0 102 -4,-1.5 4,-1.6 -5,-0.2 -1,-0.2 0.904 110.9 51.6 -66.2 -41.8 7.5 0.6 -1.5 63 63 A A H X S+ 0 0 2 -4,-3.0 4,-3.0 1,-0.2 3,-0.3 0.934 108.3 51.6 -60.6 -46.7 3.7 0.9 -1.5 64 64 A W H X S+ 0 0 50 -4,-3.1 4,-3.0 1,-0.2 5,-0.4 0.930 105.0 55.8 -55.1 -48.5 3.7 2.4 2.0 65 65 A D H X S+ 0 0 77 -4,-2.1 4,-1.5 1,-0.2 -1,-0.2 0.873 112.2 43.8 -52.5 -39.0 6.2 5.0 0.8 66 66 A Q H X S+ 0 0 89 -4,-1.6 4,-1.5 -3,-0.3 -1,-0.2 0.910 112.4 52.6 -72.9 -43.5 3.7 5.9 -1.9 67 67 A Y H >X S+ 0 0 5 -4,-3.0 4,-2.0 1,-0.2 3,-1.0 0.971 113.5 41.2 -56.1 -59.2 0.7 5.8 0.5 68 68 A E H 3X>S+ 0 0 61 -4,-3.0 4,-2.2 1,-0.3 5,-0.7 0.876 109.4 61.5 -57.9 -37.9 2.3 8.2 3.1 69 69 A S H 3<5S+ 0 0 55 -4,-1.5 -1,-0.3 -5,-0.4 -2,-0.2 0.842 109.6 41.3 -58.1 -33.6 3.6 10.3 0.2 70 70 A E H 4