==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-JAN-09 3FOV . COMPND 2 MOLECULE: UPF0102 PROTEIN RPA0323; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; . AUTHOR J.OSIPIUK,T.SKARINA,O.KAGAN,A.SAVCHENKO,A.M.EDWARDS,A.JOACHI . 102 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6184.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 74 72.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 9.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 21.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 23.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 23 A S > 0 0 125 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -21.4 24.7 11.0 9.3 2 24 A A H > + 0 0 44 2,-0.2 4,-2.3 1,-0.2 5,-0.1 0.866 360.0 47.6 -62.5 -39.5 22.7 14.0 8.1 3 25 A E H > S+ 0 0 45 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.886 112.2 47.6 -69.3 -41.4 19.8 12.4 10.0 4 26 A A H > S+ 0 0 41 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.886 112.1 51.3 -65.0 -40.4 22.0 11.7 13.1 5 27 A S H X S+ 0 0 45 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.939 111.0 47.1 -60.9 -48.5 23.2 15.3 12.9 6 28 A A H X S+ 0 0 0 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.908 113.6 47.7 -56.9 -47.2 19.6 16.6 12.7 7 29 A A H X S+ 0 0 0 -4,-2.3 4,-2.6 2,-0.2 5,-0.2 0.906 111.1 50.6 -65.7 -42.9 18.4 14.4 15.6 8 30 A D H X S+ 0 0 74 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.934 111.0 50.3 -62.5 -45.5 21.4 15.4 17.8 9 31 A Y H X S+ 0 0 47 -4,-2.5 4,-1.4 -5,-0.2 -2,-0.2 0.949 109.5 49.3 -54.3 -52.8 20.6 19.1 17.1 10 32 A L H <>S+ 0 0 0 -4,-2.6 5,-2.6 1,-0.2 3,-0.3 0.897 110.0 52.2 -59.4 -38.1 17.0 18.7 18.0 11 33 A E H ><5S+ 0 0 94 -4,-2.6 3,-1.6 1,-0.2 -1,-0.2 0.915 107.2 51.5 -63.7 -39.2 17.9 16.9 21.3 12 34 A R H 3<5S+ 0 0 159 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.788 107.3 55.6 -64.4 -27.6 20.3 19.8 22.2 13 35 A Q T 3<5S- 0 0 88 -4,-1.4 -1,-0.3 -3,-0.3 -2,-0.2 0.233 130.1 -93.8 -92.9 12.4 17.3 22.2 21.5 14 36 A G T < 5S+ 0 0 50 -3,-1.6 2,-0.3 1,-0.3 -3,-0.2 0.548 80.7 132.8 96.2 7.7 15.1 20.3 24.0 15 37 A Y < - 0 0 14 -5,-2.6 2,-0.4 -6,-0.2 -1,-0.3 -0.647 47.7-139.2 -90.5 151.0 13.3 17.8 21.8 16 38 A R E -A 34 0A 148 18,-2.7 18,-2.6 -2,-0.3 2,-0.6 -0.916 20.6-129.2-102.0 134.1 12.8 14.1 22.4 17 39 A I E +A 33 0A 27 -2,-0.4 16,-0.2 16,-0.2 3,-0.1 -0.730 28.4 174.4 -87.9 123.8 13.2 11.8 19.3 18 40 A L E + 0 0 50 14,-3.2 2,-0.3 -2,-0.6 15,-0.2 0.738 66.8 2.1 -97.4 -30.6 10.2 9.5 19.0 19 41 A A E -A 32 0A 21 13,-1.5 13,-2.7 3,-0.0 -1,-0.4 -0.976 55.2-156.7-158.8 147.8 11.1 7.9 15.7 20 42 A R E S+A 31 0A 109 -2,-0.3 11,-0.2 11,-0.2 10,-0.1 -0.990 82.3 0.0-124.8 133.8 13.8 8.0 13.1 21 43 A R E S- 0 0 158 9,-2.8 2,-0.3 -2,-0.4 9,-0.2 0.940 82.4-165.2 53.1 52.7 13.3 6.9 9.4 22 44 A F E -A 29 0A 34 7,-2.6 7,-2.0 -3,-0.1 2,-0.4 -0.561 4.5-163.1 -76.5 127.7 9.6 6.2 10.1 23 45 A K E +A 28 0A 121 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.922 18.3 163.2-117.3 138.9 8.2 4.1 7.2 24 46 A T E > -A 27 0A 31 3,-2.2 3,-0.8 -2,-0.4 39,-0.1 -0.898 52.6 -97.5-138.2 170.0 4.6 3.5 6.1 25 47 A R T 3 S+ 0 0 216 -2,-0.3 38,-0.1 1,-0.2 3,-0.0 0.902 121.9 34.9 -56.1 -37.5 3.1 2.2 2.8 26 48 A C T 3 S- 0 0 76 36,-0.1 2,-0.3 1,-0.0 -1,-0.2 0.408 126.7 -19.6-105.1 6.5 2.3 5.7 1.7 27 49 A G E < -A 24 0A 0 -3,-0.8 -3,-2.2 35,-0.2 2,-0.3 -0.983 52.6-125.9 177.3-172.0 5.1 7.8 3.0 28 50 A E E -A 23 0A 41 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.981 5.4-149.1-158.7 160.3 8.0 8.3 5.4 29 51 A I E -A 22 0A 2 -7,-2.0 -7,-2.6 -2,-0.3 3,-0.2 -0.997 9.5-151.1-136.8 127.8 9.2 10.8 8.0 30 52 A D E S+ 0 0 36 12,-0.6 -9,-2.8 -2,-0.4 2,-0.4 0.925 82.8 6.8 -69.4 -45.3 12.9 11.3 8.7 31 53 A L E -AB 20 42A 0 11,-2.0 11,-3.2 -11,-0.2 2,-0.5 -0.997 54.9-162.0-138.5 139.1 12.4 12.3 12.3 32 54 A V E +AB 19 41A 0 -13,-2.7 -14,-3.2 -2,-0.4 -13,-1.5 -0.987 28.5 176.0-110.6 122.3 9.4 12.5 14.6 33 55 A A E -AB 17 40A 0 7,-2.4 7,-3.4 -2,-0.5 2,-0.4 -0.939 15.6-154.9-131.4 151.5 10.2 14.7 17.6 34 56 A Q E +AB 16 39A 33 -18,-2.6 -18,-2.7 -2,-0.3 2,-0.3 -0.985 15.5 170.2-131.7 138.9 8.4 16.1 20.6 35 57 A R E > - B 0 38A 96 3,-2.0 3,-1.2 -2,-0.4 2,-0.2 -0.903 69.3 -42.6-142.9 116.1 8.6 19.1 22.8 36 58 A D T 3 S- 0 0 139 -2,-0.3 -1,-0.0 1,-0.2 0, 0.0 -0.487 124.2 -20.9 68.4-133.7 5.9 19.8 25.4 37 59 A A T 3 S+ 0 0 72 -2,-0.2 41,-2.6 -3,-0.1 2,-0.5 0.106 118.5 102.3 -89.7 19.1 2.4 19.3 23.7 38 60 A L E < -Bc 35 78A 19 -3,-1.2 -3,-2.0 39,-0.2 2,-0.5 -0.915 52.6-164.4-114.0 128.0 3.9 19.7 20.2 39 61 A V E -Bc 34 79A 0 39,-3.5 41,-2.1 -2,-0.5 2,-0.5 -0.958 10.7-161.8-109.4 128.1 4.8 16.9 17.7 40 62 A A E -Bc 33 80A 1 -7,-3.4 -7,-2.4 -2,-0.5 2,-0.6 -0.929 9.1-156.8-111.4 128.5 7.1 17.8 14.9 41 63 A F E -Bc 32 81A 1 39,-2.6 41,-2.6 -2,-0.5 2,-0.5 -0.943 25.3-159.8-107.2 117.1 7.4 15.8 11.7 42 64 A V E -Bc 31 82A 0 -11,-3.2 -11,-2.0 -2,-0.6 -12,-0.6 -0.846 19.1-159.5-118.9 123.6 10.7 16.6 10.3 43 65 A E E - c 0 83A 26 39,-2.2 41,-2.4 -2,-0.5 2,-0.5 -0.899 16.7-149.1 -94.2 127.0 12.2 16.3 6.8 44 66 A V E + c 0 84A 18 -2,-0.5 2,-0.4 39,-0.2 41,-0.2 -0.876 22.3 176.9-101.0 126.5 16.0 16.3 6.7 45 67 A K E - c 0 85A 85 39,-2.7 41,-2.9 -2,-0.5 2,-0.4 -0.978 36.2-115.4-131.8 135.3 17.5 17.8 3.5 46 68 A A E c 0 86A 85 -2,-0.4 41,-0.2 39,-0.2 39,-0.1 -0.605 360.0 360.0 -63.7 123.8 21.1 18.5 2.3 47 69 A R 0 0 154 39,-2.3 -1,-0.1 -2,-0.4 38,-0.0 -0.324 360.0 360.0 -61.3 360.0 21.2 22.3 2.0 48 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 49 76 A A 0 0 130 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-113.5 15.0 30.2 0.6 50 77 A Y + 0 0 60 48,-0.1 2,-0.4 2,-0.0 33,-0.0 -0.730 360.0 176.6-172.2 136.5 13.4 26.7 1.0 51 78 A A - 0 0 78 -2,-0.2 2,-0.4 48,-0.0 48,-0.1 -0.996 25.1-131.6-144.9 124.3 10.3 25.0 -0.2 52 79 A V - 0 0 11 -2,-0.4 -2,-0.0 46,-0.3 31,-0.0 -0.633 33.6-114.0 -82.6 134.2 9.0 21.4 0.3 53 80 A T > - 0 0 64 -2,-0.4 4,-2.8 1,-0.1 5,-0.2 -0.283 18.4-120.2 -68.7 144.1 7.9 19.6 -2.9 54 81 A P H > S+ 0 0 112 0, 0.0 4,-2.5 0, 0.0 5,-0.1 0.876 116.1 53.8 -50.5 -37.8 4.2 18.8 -3.3 55 82 A R H > S+ 0 0 155 2,-0.2 4,-2.2 1,-0.2 5,-0.2 0.929 110.4 44.0 -61.3 -49.5 5.3 15.1 -3.5 56 83 A Q H > S+ 0 0 30 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.906 113.4 51.8 -65.1 -40.2 7.3 15.2 -0.3 57 84 A Q H X S+ 0 0 57 -4,-2.8 4,-2.8 1,-0.2 5,-0.3 0.927 109.5 50.5 -57.2 -46.9 4.4 17.1 1.4 58 85 A S H X S+ 0 0 84 -4,-2.5 4,-2.0 -5,-0.2 -1,-0.2 0.892 114.3 44.5 -56.9 -44.0 2.0 14.4 0.2 59 86 A R H X S+ 0 0 55 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.865 113.7 47.3 -72.6 -39.3 4.2 11.7 1.5 60 87 A I H X S+ 0 0 3 -4,-2.6 4,-2.7 2,-0.2 -2,-0.2 0.888 113.4 49.0 -70.5 -38.4 5.0 13.3 4.9 61 88 A V H X S+ 0 0 60 -4,-2.8 4,-2.4 -5,-0.2 -2,-0.2 0.926 112.0 49.3 -63.4 -44.3 1.3 14.1 5.5 62 89 A A H X S+ 0 0 28 -4,-2.0 4,-1.7 -5,-0.3 -2,-0.2 0.922 114.3 45.1 -61.3 -42.0 0.4 10.5 4.6 63 90 A A H X S+ 0 0 0 -4,-2.2 4,-2.5 -37,-0.2 -2,-0.2 0.880 110.4 53.8 -69.6 -39.9 3.1 9.1 7.0 64 91 A A H X S+ 0 0 3 -4,-2.7 4,-3.3 2,-0.2 5,-0.2 0.901 107.4 52.6 -58.2 -44.5 2.0 11.6 9.8 65 92 A E H X S+ 0 0 148 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.933 110.3 46.7 -57.0 -47.0 -1.6 10.3 9.5 66 93 A A H X S+ 0 0 13 -4,-1.7 4,-1.4 2,-0.2 -2,-0.2 0.941 114.7 48.3 -62.6 -43.1 -0.4 6.7 9.9 67 94 A W H >X S+ 0 0 4 -4,-2.5 4,-0.7 1,-0.2 3,-0.7 0.959 110.2 49.2 -63.3 -52.3 1.8 7.7 12.8 68 95 A L H >< S+ 0 0 32 -4,-3.3 3,-1.0 1,-0.3 6,-0.3 0.872 107.7 55.5 -55.7 -39.9 -0.9 9.7 14.7 69 96 A S H 3< S+ 0 0 85 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.859 110.1 45.3 -63.7 -31.9 -3.4 6.9 14.3 70 97 A R H << S+ 0 0 142 -4,-1.4 -1,-0.3 -3,-0.7 -2,-0.2 0.426 111.9 55.0 -93.3 -1.5 -1.0 4.4 16.0 71 98 A H X< + 0 0 51 -3,-1.0 3,-2.7 -4,-0.7 -1,-0.2 -0.656 60.9 174.3-129.7 73.7 -0.1 6.9 18.8 72 99 A P G > S+ 0 0 95 0, 0.0 3,-2.3 0, 0.0 4,-0.4 0.784 73.7 74.8 -50.6 -33.5 -3.5 7.9 20.3 73 100 A E G 3 S+ 0 0 127 1,-0.3 3,-0.2 2,-0.1 -5,-0.1 0.698 102.1 41.8 -53.0 -19.9 -1.5 9.8 23.0 74 101 A H G X S+ 0 0 14 -3,-2.7 3,-1.1 -6,-0.3 -1,-0.3 0.257 78.8 110.8-109.3 6.9 -0.9 12.4 20.2 75 102 A A T < S+ 0 0 72 -3,-2.3 -2,-0.1 1,-0.2 -1,-0.1 0.870 94.1 27.1 -48.6 -39.7 -4.4 12.4 18.7 76 103 A X T 3 S+ 0 0 190 -4,-0.4 -1,-0.2 -3,-0.2 -2,-0.1 0.302 95.2 120.2-114.1 13.9 -4.9 16.0 20.1 77 104 A S S < S- 0 0 29 -3,-1.1 2,-0.3 1,-0.1 -39,-0.2 -0.272 75.3 -94.1 -66.2 157.2 -1.3 17.3 20.2 78 105 A E E -c 38 0A 124 -41,-2.6 -39,-3.5 -38,-0.0 2,-0.4 -0.619 45.0-152.0 -70.3 130.5 -0.2 20.3 18.3 79 106 A L E +c 39 0A 72 -2,-0.3 2,-0.3 -41,-0.2 -39,-0.2 -0.884 16.9 177.7-108.4 141.3 1.3 19.1 15.0 80 107 A R E -c 40 0A 50 -41,-2.1 -39,-2.6 -2,-0.4 2,-0.5 -0.995 21.3-141.4-142.2 141.7 4.0 21.0 13.1 81 108 A F E +cD 41 99A 14 18,-0.5 17,-1.5 -2,-0.3 18,-0.9 -0.925 31.4 178.6-109.1 124.3 5.8 20.1 9.8 82 109 A D E -c 42 0A 3 -41,-2.6 -39,-2.2 -2,-0.5 2,-0.3 -0.746 22.6-151.0-122.0 161.9 9.5 21.0 9.8 83 110 A A E -cD 43 95A 2 12,-2.1 12,-3.6 -2,-0.3 2,-0.4 -0.970 4.1-161.6-124.6 149.7 12.6 20.9 7.7 84 111 A I E -cD 44 94A 0 -41,-2.4 -39,-2.7 -2,-0.3 2,-0.5 -0.987 12.1-151.8-123.9 125.4 16.2 20.7 8.8 85 112 A L E -cD 45 93A 3 8,-2.7 8,-2.4 -2,-0.4 2,-0.6 -0.840 5.2-158.9 -97.7 127.3 18.8 21.6 6.3 86 113 A I E +c 46 0A 32 -41,-2.9 -39,-2.3 -2,-0.5 5,-0.1 -0.931 17.0 173.7-110.6 113.6 22.2 20.0 6.6 87 114 A A > - 0 0 23 -2,-0.6 3,-0.8 3,-0.3 -41,-0.0 -0.829 37.4-108.4-121.5 163.4 25.1 21.8 4.9 88 115 A P T 3 S+ 0 0 142 0, 0.0 -1,-0.0 0, 0.0 -42,-0.0 0.791 104.1 25.4 -69.7 -37.9 28.9 21.1 5.1 89 116 A N T 3 S+ 0 0 163 2,-0.1 2,-0.3 0, 0.0 0, 0.0 -0.194 113.3 61.3-123.5 44.3 30.6 23.7 7.2 90 117 A T S < S- 0 0 104 -3,-0.8 -3,-0.3 3,-0.0 3,-0.1 -0.991 84.2 -82.8-161.7 165.5 27.8 24.9 9.4 91 118 A A - 0 0 65 -2,-0.3 -4,-0.2 1,-0.1 -2,-0.1 -0.262 61.1 -85.5 -67.9 155.3 25.2 24.0 12.1 92 119 A P - 0 0 22 0, 0.0 2,-0.6 0, 0.0 -6,-0.2 -0.421 40.9-135.3 -55.9 141.3 21.9 22.4 11.0 93 120 A R E -D 85 0A 142 -8,-2.4 -8,-2.7 -3,-0.1 2,-0.5 -0.932 14.8-152.2-104.0 117.1 19.3 24.9 10.1 94 121 A H E -D 84 0A 31 -2,-0.6 -10,-0.2 -10,-0.2 -12,-0.0 -0.729 10.3-171.1 -92.7 121.7 15.9 24.2 11.6 95 122 A L E > -D 83 0A 29 -12,-3.6 -12,-2.1 -2,-0.5 3,-0.8 -0.824 13.2-161.1-110.8 86.1 12.8 25.5 9.6 96 123 A P E 3 S+ 0 0 71 0, 0.0 -14,-0.2 0, 0.0 -54,-0.0 -0.414 77.3 13.6 -61.1 139.4 9.9 24.9 11.9 97 124 A G E 3 S+ 0 0 40 -2,-0.1 -15,-0.3 1,-0.1 3,-0.1 0.912 73.6 169.1 59.3 43.2 6.6 24.9 10.1 98 125 A A E < S+ 0 0 33 -17,-1.5 2,-0.3 -3,-0.8 -46,-0.3 0.820 72.2 12.7 -59.1 -32.5 8.3 24.7 6.7 99 126 A F E S-D 81 0A 21 -18,-0.9 -18,-0.5 -48,-0.1 2,-0.5 -0.981 80.5-119.1-140.1 159.7 4.8 24.0 5.3 100 127 A D + 0 0 121 -2,-0.3 -20,-0.1 1,-0.1 -2,-0.0 -0.841 26.2 171.0 -98.3 122.4 1.2 24.3 6.6 101 128 A A + 0 0 51 -2,-0.5 -1,-0.1 -22,-0.1 -21,-0.0 0.016 37.9 138.1-111.1 27.4 -0.9 21.2 6.8 102 129 A T 0 0 101 1,-0.1 -2,-0.1 -23,-0.0 0, 0.0 -0.451 360.0 360.0 -78.9 141.5 -3.7 23.1 8.8 103 130 A P 0 0 168 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.566 360.0 360.0 -91.4 360.0 -7.4 22.6 8.0