==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 07-SEP-00 1FRY . COMPND 2 MOLECULE: MYELOID ANTIMICROBIAL PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR B.F.TACK,M.V.SAWAI,W.R.KEARNEY,A.D.ROBERTSON,M.A.SHERMAN, . 29 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2814.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 20.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 278 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 63.1 -4.6 -9.4 -0.0 2 2 A G + 0 0 56 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.644 360.0 104.9-123.7 -45.0 -6.9 -7.3 -2.3 3 3 A L + 0 0 88 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.008 34.2 169.6 -40.7 147.7 -8.1 -4.4 -0.2 4 4 A R S S+ 0 0 150 -3,-0.0 -1,-0.1 6,-0.0 5,-0.1 -0.056 76.3 12.2-159.0 39.7 -6.4 -1.2 -1.2 5 5 A R S S+ 0 0 187 4,-0.0 4,-0.2 0, 0.0 5,-0.1 0.121 104.7 79.9 175.8 -32.5 -8.4 1.6 0.6 6 6 A L S S- 0 0 149 2,-0.1 3,-0.1 1,-0.1 -3,-0.0 0.718 135.0 -44.3 -66.1 -20.7 -10.6 -0.1 3.2 7 7 A G S >> S+ 0 0 36 4,-0.0 2,-1.9 0, 0.0 3,-0.6 0.157 126.6 85.7-177.6 -36.5 -7.5 -0.3 5.3 8 8 A R T 34 S+ 0 0 117 1,-0.2 -2,-0.1 2,-0.1 0, 0.0 -0.481 81.1 68.2 -84.5 67.1 -4.6 -1.5 3.1 9 9 A K T 34 S+ 0 0 103 -2,-1.9 -1,-0.2 -4,-0.2 14,-0.1 0.412 84.9 58.2-145.3 -49.1 -3.7 2.0 1.9 10 10 A I T <4 S+ 0 0 154 -3,-0.6 -2,-0.1 -5,-0.1 13,-0.0 0.964 123.6 14.8 -54.4 -58.5 -2.4 4.0 4.9 11 11 A A S < S+ 0 0 19 -4,-0.6 12,-0.2 3,-0.1 -3,-0.0 0.547 81.9 108.4 -86.1-125.7 0.4 1.6 5.5 12 12 A H S S+ 0 0 41 1,-0.2 11,-0.6 10,-0.1 -8,-0.0 0.839 87.0 34.7 47.3 112.2 1.5 -1.1 3.0 13 13 A G S >S+ 0 0 0 9,-0.1 5,-0.5 10,-0.1 7,-0.5 0.353 125.4 44.2 97.3 -2.5 4.8 -0.1 1.4 14 14 A V T 5S+ 0 0 53 3,-0.3 -3,-0.1 6,-0.2 6,-0.1 0.525 109.2 47.8-134.7 -45.8 6.0 1.4 4.7 15 15 A K T 5S+ 0 0 169 1,-0.1 -4,-0.0 2,-0.1 5,-0.0 0.798 136.3 17.3 -71.3 -29.8 5.0 -1.0 7.4 16 16 A K T 5S+ 0 0 124 0, 0.0 -1,-0.1 0, 0.0 -5,-0.0 0.712 142.2 31.1-108.9 -37.1 6.5 -3.8 5.4 17 17 A Y T 5S- 0 0 136 4,-0.1 -3,-0.3 1,-0.0 -2,-0.1 0.954 91.1-133.4 -84.7 -71.1 8.6 -1.9 2.9 18 18 A G S