==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 08-JAN-09 3FRV . COMPND 2 MOLECULE: CHARGED MULTIVESICULAR BODY PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.P.HILL,H.L.SCHUBERT,J.MCCULLOUGH,W.I.SUNDQUIST . 133 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9476.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 115 86.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 93 69.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A Q 0 0 137 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.2 26.0 22.4 -13.5 2 9 A E + 0 0 181 2,-0.1 0, 0.0 3,-0.0 0, 0.0 -0.169 360.0 155.9-157.4 62.1 24.8 18.8 -13.4 3 10 A K - 0 0 149 1,-0.1 3,-0.0 3,-0.0 0, 0.0 -0.237 50.8 -97.0 -81.0 163.1 26.8 16.9 -10.9 4 11 A P - 0 0 62 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 -0.732 44.3-116.5 -73.6 141.5 25.8 13.8 -9.1 5 12 A P > - 0 0 89 0, 0.0 2,-4.8 0, 0.0 3,-0.8 -0.227 55.6 -67.9 -63.8 169.9 24.3 14.6 -5.7 6 13 A K T 3 S+ 0 0 75 1,-0.3 4,-0.1 2,-0.1 85,-0.1 -0.180 112.2 104.0 -61.1 52.8 26.2 13.2 -2.7 7 14 A E T 3> + 0 0 89 -2,-4.8 4,-2.5 2,-0.1 -1,-0.3 0.088 46.0 99.2-112.5 1.0 25.1 9.8 -3.9 8 15 A L H <> S+ 0 0 26 -3,-0.8 4,-2.7 1,-0.2 5,-0.2 0.831 79.1 61.0 -49.4 -28.0 28.7 9.6 -5.1 9 16 A V H > S+ 0 0 0 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.926 99.9 47.8 -70.9 -45.5 28.7 7.7 -1.8 10 17 A N H > S+ 0 0 86 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.961 112.9 51.1 -60.2 -39.9 26.3 5.1 -2.9 11 18 A E H X S+ 0 0 74 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.961 111.7 44.6 -59.8 -55.5 28.3 4.7 -6.1 12 19 A W H X S+ 0 0 0 -4,-2.7 4,-2.6 1,-0.2 5,-0.2 0.823 110.2 57.4 -59.5 -32.2 31.6 4.3 -4.3 13 20 A S H X S+ 0 0 23 -4,-2.5 4,-2.5 2,-0.2 -1,-0.2 0.947 105.8 49.8 -62.5 -47.6 29.9 1.9 -1.9 14 21 A L H X S+ 0 0 116 -4,-2.5 4,-3.3 2,-0.2 -2,-0.2 0.960 113.2 45.1 -54.9 -54.6 28.9 -0.3 -4.7 15 22 A K H X S+ 0 0 49 -4,-2.3 4,-3.1 1,-0.2 5,-0.3 0.924 114.1 48.1 -56.1 -48.9 32.4 -0.4 -6.2 16 23 A I H X S+ 0 0 0 -4,-2.6 4,-1.1 2,-0.2 -1,-0.2 0.875 113.4 49.4 -58.2 -38.7 34.1 -1.0 -2.8 17 24 A R H >X S+ 0 0 105 -4,-2.5 4,-1.6 -5,-0.2 3,-1.0 0.971 109.7 51.7 -68.0 -49.9 31.6 -3.7 -2.2 18 25 A K H >X S+ 0 0 116 -4,-3.3 4,-2.0 1,-0.3 3,-0.9 0.933 108.2 50.2 -47.5 -58.8 32.3 -5.2 -5.7 19 26 A E H 3X S+ 0 0 9 -4,-3.1 4,-2.4 1,-0.3 -1,-0.3 0.767 106.1 58.0 -54.2 -25.4 36.1 -5.3 -5.1 20 27 A M H X S+ 0 0 84 -4,-2.7 4,-1.9 2,-0.2 3,-0.5 0.962 108.9 50.9 -55.0 -54.1 42.3 -21.8 -0.1 32 39 A R H 3X S+ 0 0 112 -4,-3.0 4,-1.0 1,-0.3 -1,-0.2 0.862 110.8 49.4 -52.9 -37.7 41.1 -24.4 -2.6 33 40 A E H 3X S+ 0 0 117 -4,-2.1 4,-2.2 -5,-0.2 -1,-0.3 0.803 104.2 58.2 -75.9 -27.9 44.6 -24.6 -4.0 34 41 A E H X S+ 0 0 126 -4,-2.4 4,-2.6 2,-0.2 3,-1.3 0.985 110.7 42.1 -54.8 -69.3 51.4 -35.7 2.3 43 50 A D H 3X S+ 0 0 86 -4,-2.2 4,-2.3 1,-0.3 6,-0.2 0.879 113.1 54.2 -42.2 -49.1 52.3 -38.1 -0.5 44 51 A A H 3<>S+ 0 0 6 -4,-2.5 5,-1.3 -5,-0.2 9,-0.3 0.777 111.2 45.5 -66.1 -27.8 55.7 -36.5 -0.9 45 52 A A H X<5S+ 0 0 58 -4,-2.0 3,-2.7 -3,-1.3 -2,-0.2 0.954 111.4 51.8 -71.2 -54.0 56.5 -37.0 2.8 46 53 A K H 3<5S+ 0 0 186 -4,-2.6 -2,-0.2 1,-0.3 -3,-0.2 0.787 110.2 49.7 -51.4 -34.4 55.2 -40.6 2.8 47 54 A K T 3<5S- 0 0 143 -4,-2.3 -1,-0.3 -5,-0.3 -2,-0.2 0.330 115.0-114.6 -92.5 8.1 57.4 -41.4 -0.2 48 55 A G T < 5 + 0 0 52 -3,-2.7 2,-2.4 1,-0.2 3,-0.2 0.566 64.8 146.7 73.0 8.0 60.5 -40.0 1.4 49 56 A Q >>< + 0 0 95 -5,-1.3 4,-1.9 -6,-0.2 3,-1.1 -0.465 17.0 171.1 -73.1 73.6 60.9 -37.1 -1.2 50 57 A K H 3> S+ 0 0 164 -2,-2.4 4,-2.5 1,-0.3 3,-0.2 0.941 72.2 54.6 -50.9 -52.8 62.4 -34.7 1.4 51 58 A D H 3> S+ 0 0 132 1,-0.2 4,-1.4 -3,-0.2 -1,-0.3 0.736 108.0 50.3 -54.7 -26.9 63.3 -32.1 -1.2 52 59 A V H <> S+ 0 0 60 -3,-1.1 4,-3.2 2,-0.2 5,-0.2 0.906 108.1 49.2 -83.4 -44.7 59.8 -32.0 -2.5 53 60 A C H X S+ 0 0 26 -4,-1.9 4,-3.1 -9,-0.3 -2,-0.2 0.971 108.6 57.6 -52.4 -54.0 58.0 -31.6 0.8 54 61 A I H X S+ 0 0 96 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.895 112.6 37.9 -42.2 -54.6 60.5 -28.8 1.5 55 62 A V H X S+ 0 0 91 -4,-1.4 4,-2.1 1,-0.2 -1,-0.2 0.947 112.4 54.6 -73.7 -44.4 59.5 -26.9 -1.7 56 63 A L H X S+ 0 0 39 -4,-3.2 4,-1.8 1,-0.2 -1,-0.2 0.869 108.3 54.8 -55.0 -32.1 55.8 -27.6 -1.5 57 64 A A H X S+ 0 0 43 -4,-3.1 4,-2.5 2,-0.2 3,-0.3 0.961 103.8 50.4 -58.3 -57.2 56.1 -26.1 2.1 58 65 A K H X S+ 0 0 115 -4,-2.0 4,-1.5 1,-0.3 -1,-0.2 0.809 110.8 53.1 -54.7 -27.1 57.6 -22.9 0.8 59 66 A E H X S+ 0 0 84 -4,-2.1 4,-1.8 -5,-0.2 -1,-0.3 0.917 107.0 51.0 -68.8 -43.1 54.6 -23.0 -1.5 60 67 A M H X S+ 0 0 54 -4,-1.8 4,-2.3 -3,-0.3 -2,-0.2 0.912 108.6 49.6 -63.8 -46.1 52.3 -23.4 1.5 61 68 A I H X S+ 0 0 88 -4,-2.5 4,-2.6 1,-0.2 5,-0.2 0.905 108.6 53.9 -60.4 -43.7 53.8 -20.4 3.4 62 69 A R H X S+ 0 0 166 -4,-1.5 4,-1.6 -5,-0.3 -1,-0.2 0.835 108.0 50.1 -63.1 -36.3 53.5 -18.2 0.3 63 70 A S H X S+ 0 0 10 -4,-1.8 4,-2.1 2,-0.2 3,-0.3 0.982 108.9 51.7 -59.2 -59.4 49.8 -19.1 0.1 64 71 A R H X S+ 0 0 196 -4,-2.3 4,-2.5 1,-0.3 3,-0.4 0.910 112.0 45.2 -47.4 -53.4 49.2 -18.3 3.7 65 72 A K H X S+ 0 0 138 -4,-2.6 4,-2.7 1,-0.2 5,-0.3 0.851 108.7 58.4 -56.6 -36.4 50.8 -14.8 3.3 66 73 A A H X S+ 0 0 35 -4,-1.6 4,-1.2 -3,-0.3 -1,-0.2 0.905 110.4 42.7 -59.8 -39.7 48.8 -14.3 0.1 67 74 A V H X S+ 0 0 13 -4,-2.1 4,-3.3 -3,-0.4 5,-0.3 0.856 112.8 53.0 -76.4 -39.0 45.6 -14.8 2.1 68 75 A S H X S+ 0 0 80 -4,-2.5 4,-2.5 -5,-0.3 -2,-0.2 0.995 109.3 47.1 -54.6 -71.3 46.9 -12.7 5.0 69 76 A K H X S+ 0 0 142 -4,-2.7 4,-2.1 1,-0.2 -1,-0.2 0.794 114.5 52.1 -42.3 -34.7 47.7 -9.8 2.7 70 77 A L H X S+ 0 0 17 -4,-1.2 4,-2.4 -5,-0.3 -1,-0.2 0.989 107.1 46.6 -67.4 -61.4 44.3 -10.3 1.2 71 78 A Y H X S+ 0 0 122 -4,-3.3 4,-2.2 2,-0.2 -2,-0.2 0.822 110.5 59.1 -52.1 -29.6 42.2 -10.3 4.4 72 79 A A H >X S+ 0 0 41 -4,-2.5 4,-1.8 -5,-0.3 3,-1.2 0.996 105.1 45.6 -57.2 -74.2 44.2 -7.2 5.2 73 80 A S H 3X S+ 0 0 6 -4,-2.1 4,-3.0 1,-0.3 -2,-0.2 0.800 110.2 56.2 -32.8 -45.0 43.0 -5.4 2.1 74 81 A K H 3X S+ 0 0 49 -4,-2.4 4,-3.2 2,-0.2 -1,-0.3 0.922 105.2 50.6 -64.5 -42.3 39.5 -6.6 2.9 75 82 A A H S+ 0 0 102 1,-0.2 4,-0.8 2,-0.2 5,-0.1 0.576 94.6 59.3 -65.1 -5.4 41.6 10.8 7.8 102 109 A E H >> S+ 0 0 108 2,-0.2 4,-1.7 1,-0.2 3,-0.5 0.939 104.7 41.6 -85.8 -57.7 40.1 7.4 8.1 103 110 A V H 34 S+ 0 0 0 1,-0.2 -2,-0.2 2,-0.2 -1,-0.2 0.221 113.5 61.3 -73.9 20.4 38.9 6.8 4.5 104 111 A M H 34 S+ 0 0 106 -4,-0.1 -1,-0.2 2,-0.1 -2,-0.2 0.755 104.2 40.3-111.8 -44.6 42.2 8.4 3.5 105 112 A K H XX S+ 0 0 141 -4,-0.8 4,-3.0 -3,-0.5 3,-1.2 0.846 116.0 50.1 -77.7 -35.3 44.7 6.0 5.0 106 113 A A H 3X S+ 0 0 3 -4,-1.7 4,-0.9 1,-0.3 -1,-0.2 0.938 113.0 48.0 -63.0 -44.7 42.7 2.9 4.1 107 114 A M H 34 S+ 0 0 2 -5,-0.3 -1,-0.3 2,-0.2 -2,-0.2 0.148 113.7 50.1 -79.9 13.9 42.5 4.3 0.6 108 115 A Q H X4 S+ 0 0 138 -3,-1.2 3,-0.6 2,-0.1 -2,-0.2 0.654 113.3 40.8-110.9 -55.3 46.2 4.9 0.8 109 116 A S H 3< S+ 0 0 55 -4,-3.0 3,-0.2 1,-0.2 -2,-0.2 0.614 114.7 59.9 -63.0 -15.8 47.3 1.5 1.9 110 117 A L T 3< S+ 0 0 1 -4,-0.9 2,-1.5 -5,-0.2 -1,-0.2 0.741 78.6 81.2 -91.7 -27.9 44.7 0.1 -0.6 111 118 A V < + 0 0 38 -3,-0.6 -1,-0.2 9,-0.1 -2,-0.1 -0.122 66.1 140.4 -75.1 42.4 46.1 1.6 -3.8 112 119 A K - 0 0 56 -2,-1.5 8,-0.1 -3,-0.2 -2,-0.1 -0.153 54.4-120.3 -71.7 178.4 48.6 -1.3 -4.0 113 120 A I S S+ 0 0 137 1,-0.1 2,-1.1 3,-0.1 4,-0.3 0.939 78.8 90.4 -98.1 -51.8 49.5 -2.9 -7.3 114 121 A P S S+ 0 0 104 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.305 92.7 27.4 -58.8 92.6 48.7 -6.8 -7.6 115 122 A E S S- 0 0 66 -2,-1.1 0, 0.0 1,-0.0 0, 0.0 -0.685 115.5 -60.8 139.0 171.2 45.1 -6.6 -8.9 116 123 A I S > S+ 0 0 97 -2,-0.2 2,-4.7 1,-0.2 3,-2.1 0.326 82.3 140.3 -61.9 11.0 43.0 -4.2 -11.0 117 124 A Q T 3 + 0 0 5 -4,-0.3 -1,-0.2 1,-0.3 4,-0.0 -0.005 40.0 92.9 -58.6 39.0 43.7 -1.8 -8.1 118 125 A A T >> S+ 0 0 63 -2,-4.7 3,-1.1 2,-0.1 4,-0.6 0.640 77.5 63.4 -91.9 -29.3 44.1 1.0 -10.5 119 126 A T H X> S+ 0 0 47 -3,-2.1 4,-2.8 1,-0.3 3,-1.5 0.893 94.1 60.5 -60.2 -40.6 40.4 1.7 -9.9 120 127 A M H 3> S+ 0 0 0 1,-0.3 4,-1.9 2,-0.2 -1,-0.3 0.743 100.3 54.4 -56.3 -28.4 41.3 2.4 -6.3 121 128 A R H <> S+ 0 0 119 -3,-1.1 4,-1.1 2,-0.2 -1,-0.3 0.698 110.4 47.6 -78.9 -19.5 43.5 5.2 -7.6 122 129 A E H S+ 0 0 0 -4,-3.1 5,-2.3 2,-0.2 4,-1.8 0.871 103.9 51.8 -65.6 -44.6 36.8 11.3 -3.4 128 135 A M H <5S+ 0 0 137 -4,-1.8 3,-0.3 -3,-0.4 -1,-0.2 0.950 108.2 51.2 -55.8 -53.3 39.2 14.2 -3.1 129 136 A K H <5S+ 0 0 194 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.889 108.9 53.0 -49.9 -42.6 37.2 16.4 -5.5 130 137 A A H <5S- 0 0 28 -4,-1.7 -1,-0.3 -5,-0.3 -2,-0.2 0.888 123.0-112.3 -61.5 -38.1 34.2 15.5 -3.4 131 138 A G T <5S+ 0 0 34 -4,-1.8 -3,-0.2 -3,-0.3 -2,-0.1 0.729 89.4 108.7 105.7 34.3 36.1 16.7 -0.4 132 139 A I < 0 0 2 -5,-2.3 -32,-1.0 -33,-0.1 -4,-0.2 0.664 360.0 360.0-105.4 -31.0 36.7 13.5 1.5 133 140 A I 0 0 34 -6,-0.5 -29,-0.1 -34,-0.2 -8,-0.1 -0.243 360.0 360.0-144.2 360.0 40.4 13.2 0.8