==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 12-JAN-09 3FT7 . COMPND 2 MOLECULE: PLASMID PRN1, COMPLETE SEQUENCE; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ISLANDICUS; . AUTHOR P.NEUMANN,C.LOEW,U.WEININGER,M.T.STUBBS . 91 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5623.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 48 52.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A L 0 0 135 0, 0.0 56,-0.1 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0-162.1 13.7 4.9 -10.7 2 9 A N + 0 0 149 54,-0.2 2,-0.2 2,-0.1 0, 0.0 -0.148 360.0 43.9-110.9-157.2 15.0 8.5 -9.8 3 10 A G S S+ 0 0 47 -2,-0.1 2,-0.5 53,-0.1 53,-0.0 -0.324 103.1 9.5 65.4-119.6 14.2 10.7 -6.8 4 11 A I B -A 57 0A 31 53,-2.5 53,-1.6 -2,-0.2 -1,-0.1 -0.866 66.2-140.1-117.2 109.2 14.3 9.2 -3.2 5 12 A K - 0 0 101 -2,-0.5 2,-0.4 51,-0.2 51,-0.2 -0.064 6.7-145.6 -64.2 154.9 15.4 5.6 -2.3 6 13 A L - 0 0 11 49,-0.3 49,-0.5 2,-0.1 -1,-0.1 -0.984 13.2-175.8-119.7 134.8 13.9 3.2 0.2 7 14 A G + 0 0 43 -2,-0.4 2,-0.2 47,-0.2 47,-0.2 -0.286 31.1 149.4-119.6 47.0 15.9 0.7 2.4 8 15 A V - 0 0 9 45,-0.2 45,-3.0 47,-0.1 2,-0.4 -0.545 37.5-145.1 -79.9 140.7 13.0 -1.2 4.1 9 16 A Y E +B 52 0B 123 43,-0.3 43,-0.2 -2,-0.2 42,-0.1 -0.897 25.9 179.1 -99.7 139.8 13.2 -4.8 5.2 10 17 A I E -B 51 0B 0 41,-2.3 41,-0.6 -2,-0.4 2,-0.1 -0.846 38.1 -67.9-134.8 166.0 10.0 -6.8 4.8 11 18 A P > - 0 0 23 0, 0.0 4,-1.9 0, 0.0 3,-0.3 -0.350 42.4-125.5 -61.1 135.8 8.7 -10.4 5.5 12 19 A Q H > S+ 0 0 121 36,-0.5 4,-1.8 37,-0.3 37,-0.1 0.800 110.8 47.9 -51.3 -41.4 10.2 -13.0 3.1 13 20 A E H > S+ 0 0 107 2,-0.2 4,-3.1 1,-0.2 -1,-0.2 0.861 107.1 57.6 -68.6 -44.1 6.8 -14.2 2.0 14 21 A W H > S+ 0 0 40 -3,-0.3 4,-2.1 2,-0.2 5,-0.2 0.972 105.7 49.2 -45.7 -69.6 5.6 -10.7 1.4 15 22 A H H >X S+ 0 0 38 -4,-1.9 4,-2.8 2,-0.2 3,-0.7 0.927 111.6 49.9 -29.0 -64.0 8.4 -10.1 -1.0 16 23 A D H 3X S+ 0 0 74 -4,-1.8 4,-2.5 1,-0.3 5,-0.2 0.932 110.8 48.0 -49.7 -52.8 7.5 -13.3 -2.8 17 24 A R H 3X S+ 0 0 71 -4,-3.1 4,-1.3 1,-0.3 -1,-0.3 0.750 114.2 48.7 -62.5 -24.3 3.8 -12.4 -3.0 18 25 A L H S+ 0 0 0 -4,-2.2 5,-2.6 2,-0.2 4,-1.1 0.891 111.5 46.7 -49.3 -47.4 4.8 -8.0 -10.3 23 30 A K H ><5S+ 0 0 140 -4,-1.6 3,-2.3 1,-0.2 -2,-0.2 0.998 109.9 51.4 -51.5 -75.4 5.0 -11.0 -12.7 24 31 A E H 3<5S+ 0 0 128 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.654 117.2 40.7 -32.2 -29.7 1.3 -11.4 -13.3 25 32 A K H 3<5S- 0 0 105 -4,-1.6 -1,-0.3 -3,-0.3 -2,-0.2 0.600 110.6-113.4-106.4 -8.6 1.0 -7.7 -14.1 26 33 A N T <<5S+ 0 0 153 -3,-2.3 2,-0.2 -4,-1.1 -3,-0.2 0.864 78.0 119.0 69.3 44.1 4.1 -7.1 -16.3 27 34 A L < - 0 0 67 -5,-2.6 -1,-0.3 -6,-0.2 2,-0.2 -0.717 63.6-116.0-121.4 166.8 5.7 -4.9 -13.7 28 35 A T > - 0 0 78 -2,-0.2 4,-1.7 -3,-0.1 5,-0.2 -0.489 37.8-101.1 -92.8 174.4 8.9 -5.1 -11.6 29 36 A L H > S+ 0 0 26 2,-0.2 4,-1.1 -2,-0.2 5,-0.1 0.854 124.3 53.0 -67.9 -30.4 8.9 -5.3 -7.8 30 37 A S H > S+ 0 0 30 2,-0.2 4,-3.3 1,-0.2 3,-0.5 0.965 106.6 53.4 -60.9 -51.1 9.7 -1.6 -7.5 31 38 A D H > S+ 0 0 57 1,-0.3 4,-1.0 2,-0.2 -2,-0.2 0.890 112.9 42.4 -49.3 -47.6 6.8 -0.8 -9.7 32 39 A V H X S+ 0 0 0 -4,-1.7 4,-1.8 2,-0.2 -1,-0.3 0.710 112.1 55.9 -75.4 -23.8 4.4 -2.8 -7.5 33 40 A C H X S+ 0 0 3 -4,-1.1 4,-2.3 -3,-0.5 -2,-0.2 0.962 107.9 45.9 -74.2 -48.6 6.0 -1.3 -4.5 34 41 A R H X S+ 0 0 18 -4,-3.3 4,-2.9 1,-0.2 5,-0.2 0.794 109.5 60.8 -56.7 -24.5 5.4 2.2 -5.7 35 42 A L H X S+ 0 0 52 -4,-1.0 4,-2.1 -5,-0.3 -1,-0.2 0.942 106.5 41.3 -73.3 -47.6 1.9 0.9 -6.4 36 43 A A H X S+ 0 0 0 -4,-1.8 4,-2.1 -3,-0.2 -2,-0.2 0.884 116.1 52.4 -65.7 -39.2 1.1 -0.1 -2.8 37 44 A I H X S+ 0 0 3 -4,-2.3 4,-2.8 2,-0.2 -2,-0.2 0.947 112.4 42.1 -59.2 -56.1 2.7 3.1 -1.6 38 45 A K H X S+ 0 0 75 -4,-2.9 4,-1.3 1,-0.2 -1,-0.2 0.845 114.7 53.3 -63.1 -32.9 0.8 5.5 -3.9 39 46 A E H X S+ 0 0 79 -4,-2.1 4,-1.4 -5,-0.2 -1,-0.2 0.848 110.7 47.1 -69.3 -34.6 -2.4 3.4 -3.1 40 47 A Y H >X S+ 0 0 2 -4,-2.1 4,-1.2 1,-0.2 3,-0.9 0.982 111.3 49.9 -66.5 -54.3 -1.7 3.8 0.6 41 48 A L H 3< S+ 0 0 1 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.751 106.3 56.9 -56.4 -28.1 -1.1 7.5 0.2 42 49 A D H 3< S+ 0 0 86 -4,-1.3 3,-0.5 -5,-0.2 -1,-0.3 0.892 100.3 58.0 -72.5 -36.9 -4.4 7.8 -1.7 43 50 A N H << S+ 0 0 102 -4,-1.4 2,-1.1 -3,-0.9 -2,-0.2 0.844 99.5 60.0 -54.3 -44.1 -6.3 6.2 1.3 44 51 A H < 0 0 75 -4,-1.2 -1,-0.3 1,-0.2 -2,-0.1 -0.394 360.0 360.0 -82.4 52.5 -5.1 9.1 3.5 45 52 A D 0 0 122 -2,-1.1 -1,-0.2 -3,-0.5 0, 0.0 0.152 360.0 360.0 19.0 360.0 -6.8 11.8 1.4 46 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 47 7 B L 0 0 200 0, 0.0 3,-0.2 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 22.6 14.9 -12.2 10.6 48 8 B L + 0 0 138 -38,-0.0 -36,-0.5 -36,-0.0 -38,-0.0 0.356 360.0 21.2-110.6 -67.2 11.2 -11.4 11.1 49 9 B N S S+ 0 0 43 -38,-0.2 -37,-0.3 1,-0.1 2,-0.3 0.436 88.5 145.2 -51.9-147.3 11.5 -8.9 8.5 50 10 B G + 0 0 23 1,-0.4 -1,-0.1 -3,-0.2 0, 0.0 -0.666 34.1 83.3 137.7 -92.1 14.6 -9.9 6.6 51 11 B I E -B 10 0B 48 -41,-0.6 -41,-2.3 -2,-0.3 -1,-0.4 -0.172 68.1-134.7 -57.8 143.9 14.6 -9.2 2.8 52 12 B K E -B 9 0B 84 -43,-0.2 2,-0.4 -3,-0.1 -43,-0.3 -0.729 13.2-158.8 -98.3 144.7 15.5 -5.7 1.8 53 13 B L - 0 0 7 -45,-3.0 2,-0.4 -2,-0.3 -45,-0.2 -0.907 8.0-169.1-113.7 150.2 13.8 -3.5 -0.8 54 14 B G + 0 0 37 -2,-0.4 2,-0.4 -47,-0.2 -47,-0.2 -0.962 20.0 168.0-131.5 115.6 15.3 -0.6 -2.6 55 15 B V - 0 0 2 -49,-0.5 2,-0.7 -2,-0.4 -49,-0.3 -0.987 28.3-143.6-135.5 119.6 12.5 1.2 -4.3 56 16 B Y + 0 0 100 -2,-0.4 -54,-0.2 -51,-0.2 -51,-0.2 -0.788 31.8 171.4 -92.3 114.4 13.1 4.6 -5.8 57 17 B I B -A 4 0A 1 -53,-1.6 -53,-2.5 -2,-0.7 -2,-0.0 -0.778 38.8 -82.3-121.1 160.2 10.0 6.6 -5.3 58 18 B P > - 0 0 47 0, 0.0 4,-1.1 0, 0.0 -1,-0.2 -0.159 36.3-119.5 -57.2 163.6 9.1 10.3 -5.8 59 19 B Q H > S+ 0 0 102 2,-0.2 4,-3.6 1,-0.2 5,-0.4 0.813 111.9 60.4 -67.6 -36.3 10.1 12.8 -3.1 60 20 B E H > S+ 0 0 109 1,-0.3 4,-1.4 2,-0.2 -1,-0.2 0.869 108.1 42.0 -64.5 -39.8 6.5 13.8 -2.6 61 21 B W H > S+ 0 0 45 3,-0.2 4,-2.7 2,-0.2 -1,-0.3 0.855 119.0 50.2 -70.3 -37.7 5.5 10.2 -1.6 62 22 B H H X S+ 0 0 26 -4,-1.1 4,-2.1 2,-0.2 -2,-0.2 0.996 113.5 38.7 -66.3 -67.6 8.7 10.1 0.4 63 23 B D H X S+ 0 0 72 -4,-3.6 4,-0.9 1,-0.2 -1,-0.2 0.836 120.9 50.0 -52.6 -31.7 8.4 13.4 2.4 64 24 B R H X S+ 0 0 64 -4,-1.4 4,-1.4 -5,-0.4 3,-0.3 0.888 105.3 51.9 -82.5 -40.7 4.7 12.7 2.8 65 25 B L H X S+ 0 0 0 -4,-2.7 4,-2.1 1,-0.2 3,-0.4 0.926 105.3 60.2 -55.1 -44.8 4.9 9.1 4.0 66 26 B M H X S+ 0 0 86 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.886 102.2 52.4 -45.3 -42.1 7.3 10.5 6.6 67 27 B E H X S+ 0 0 147 -4,-0.9 4,-0.9 -3,-0.3 -1,-0.2 0.823 105.3 52.5 -74.4 -32.7 4.5 12.8 7.9 68 28 B I H >X S+ 0 0 21 -4,-1.4 4,-1.2 -3,-0.4 3,-0.8 0.933 106.7 55.1 -62.5 -46.6 2.0 10.0 8.3 69 29 B A H >X>S+ 0 0 3 -4,-2.1 3,-1.5 1,-0.3 5,-1.2 0.951 104.9 51.4 -49.6 -60.0 4.6 8.1 10.4 70 30 B K H 3<5S+ 0 0 171 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.720 112.4 48.2 -53.9 -24.3 5.1 11.0 12.8 71 31 B E H <<5S+ 0 0 166 -4,-0.9 -1,-0.3 -3,-0.8 -2,-0.2 0.564 119.6 35.9 -92.8 -13.2 1.2 11.1 13.3 72 32 B K H <<5S- 0 0 106 -3,-1.5 -2,-0.2 -4,-1.2 -3,-0.2 0.362 115.3-118.8-105.2 0.2 0.9 7.3 13.9 73 33 B N T <5 + 0 0 138 -4,-1.1 2,-0.3 -5,-0.3 -3,-0.2 0.993 67.8 133.5 46.2 78.4 4.2 7.5 15.7 74 34 B L < - 0 0 61 -5,-1.2 -1,-0.2 -8,-0.2 -2,-0.1 -0.947 61.5 -99.6-140.9 164.8 5.9 5.1 13.3 75 35 B T > - 0 0 71 -2,-0.3 4,-1.5 1,-0.1 3,-0.3 -0.432 42.1-109.1 -70.2 158.6 9.2 4.8 11.4 76 36 B L H > S+ 0 0 35 1,-0.2 4,-0.9 2,-0.2 3,-0.2 0.944 123.9 57.1 -50.9 -41.8 9.1 5.9 7.8 77 37 B S H > S+ 0 0 35 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.728 98.7 54.7 -61.6 -39.1 9.5 2.0 7.3 78 38 B D H > S+ 0 0 40 -3,-0.3 4,-2.0 1,-0.2 -1,-0.2 0.900 103.6 58.1 -56.8 -45.3 6.5 0.9 9.4 79 39 B V H X S+ 0 0 0 -4,-1.5 4,-1.4 -3,-0.2 -2,-0.2 0.851 111.2 40.5 -61.2 -32.3 4.3 3.1 7.2 80 40 B C H X S+ 0 0 2 -4,-0.9 4,-3.0 2,-0.2 3,-0.4 0.947 103.9 64.6 -81.7 -50.7 5.4 1.3 4.1 81 41 B R H X S+ 0 0 59 -4,-2.3 4,-2.4 1,-0.3 -2,-0.2 0.879 112.5 38.1 -37.1 -45.2 5.3 -2.1 5.5 82 42 B L H X S+ 0 0 55 -4,-2.0 4,-2.2 2,-0.2 5,-0.3 0.782 108.5 59.5 -85.6 -26.2 1.6 -1.6 5.9 83 43 B A H X S+ 0 0 2 -4,-1.4 4,-1.4 -3,-0.4 -2,-0.2 0.892 115.7 40.0 -49.7 -45.5 1.1 0.2 2.6 84 44 B I H X S+ 0 0 6 -4,-3.0 4,-3.0 2,-0.2 -2,-0.2 0.892 114.1 50.2 -71.3 -50.7 2.5 -3.0 1.2 85 45 B K H X S+ 0 0 76 -4,-2.4 4,-2.6 -5,-0.4 -3,-0.2 0.898 112.5 47.4 -59.9 -43.3 0.7 -5.5 3.5 86 46 B E H X S+ 0 0 69 -4,-2.2 4,-3.1 2,-0.2 -1,-0.2 0.958 112.9 49.8 -63.1 -47.6 -2.7 -3.9 2.8 87 47 B Y H < S+ 0 0 3 -4,-1.4 -2,-0.2 -5,-0.3 -1,-0.2 0.907 113.0 45.7 -56.9 -44.3 -1.9 -3.9 -0.8 88 48 B L H >< S+ 0 0 0 -4,-3.0 3,-1.0 1,-0.2 -1,-0.2 0.833 111.1 53.8 -71.6 -30.7 -1.0 -7.6 -0.7 89 49 B D H 3< S+ 0 0 66 -4,-2.6 2,-0.6 1,-0.3 3,-0.4 0.954 101.4 59.9 -61.9 -53.6 -4.1 -8.3 1.4 90 50 B N T 3< S+ 0 0 117 -4,-3.1 -1,-0.3 1,-0.3 -2,-0.1 -0.035 90.6 69.7 -66.4 29.5 -6.2 -6.6 -1.3 91 51 B H < 0 0 69 -3,-1.0 -1,-0.3 -2,-0.6 -2,-0.1 -0.354 360.0 360.0-129.7 47.8 -5.0 -9.2 -3.8 92 52 B D 0 0 126 -3,-0.4 -1,-0.4 0, 0.0 0, 0.0 -0.064 360.0 360.0 44.2 360.0 -7.0 -11.8 -1.9