==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN FIBRIL 13-JAN-09 3FTH . COMPND 2 MOLECULE: NFLVHSS HEPTAPEPTIDE FROM ISLET AMYLOID . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.J.W.WILTZIUS,M.R.SAWAYA,D.EISENBERG . 14 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1554.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 42.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A N 0 0 170 0, 0.0 2,-0.4 0, 0.0 14,-0.2 0.000 360.0 360.0 360.0 142.7 4.3 -2.0 10.3 2 2 A F E -A 14 0A 119 12,-2.5 12,-2.7 2,-0.0 2,-0.4 -1.000 360.0-178.2-138.9 132.9 4.6 -3.2 6.7 3 3 A L E +A 13 0A 112 -2,-0.4 2,-0.3 10,-0.2 10,-0.2 -0.996 5.0 172.1-127.5 132.5 4.6 -1.4 3.3 4 4 A V E +A 12 0A 48 8,-2.2 8,-2.6 -2,-0.4 2,-0.3 -0.991 3.2 176.6-136.7 140.2 4.8 -2.9 -0.2 5 5 A H E +A 11 0A 118 -2,-0.3 2,-0.3 6,-0.2 6,-0.2 -0.977 5.0 175.5-137.7 133.6 4.5 -1.2 -3.6 6 6 A S E A 10 0A 63 4,-2.4 4,-2.3 -2,-0.3 -2,-0.0 -0.994 360.0 360.0-138.2 140.7 4.9 -2.9 -7.0 7 7 A S 0 0 146 -2,-0.3 -1,-0.1 2,-0.2 4,-0.0 0.416 360.0 360.0-139.9 360.0 4.4 -1.6 -10.6 8 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 9 1 B N 0 0 178 0, 0.0 2,-0.3 0, 0.0 -2,-0.2 0.000 360.0 360.0 360.0 155.2 -0.1 -1.8 -9.9 10 2 B F E +A 6 0A 112 -4,-2.3 -4,-2.4 2,-0.0 2,-0.4 -0.971 360.0 176.6-150.3 130.6 -0.2 -3.0 -6.3 11 3 B L E +A 5 0A 119 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.999 2.3 176.4-134.4 130.7 -0.0 -1.2 -2.8 12 4 B V E +A 4 0A 53 -8,-2.6 -8,-2.2 -2,-0.4 2,-0.4 -0.999 2.7 176.6-132.8 136.3 -0.3 -2.7 0.8 13 5 B H E +A 3 0A 117 -2,-0.3 2,-0.4 -10,-0.2 -10,-0.2 -0.973 4.2 177.2-133.4 120.2 -0.0 -0.9 4.1 14 6 B S E A 2 0A 59 -12,-2.7 -12,-2.5 -2,-0.4 -2,-0.0 -0.982 360.0 360.0-121.1 140.8 -0.5 -2.7 7.5 15 7 B S 0 0 140 -2,-0.4 -2,-0.0 -14,-0.2 -12,-0.0 -0.911 360.0 360.0-142.1 360.0 -0.1 -1.1 11.0