==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 15-SEP-00 1FUV . COMPND 2 MOLECULE: RGD PEPTIDE ISOMER-A; . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.ASSA-MUNT,X.JIA,P.LAAKKONEN,E.RUOSLAHTI . 11 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1127.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 83 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-175.7 4.9 -0.5 -2.3 2 2 A a + 0 0 81 8,-0.1 7,-0.2 9,-0.1 8,-0.1 -0.618 360.0 86.2-138.6 76.5 3.5 0.7 1.1 3 3 A D S S+ 0 0 130 5,-1.3 6,-0.1 -2,-0.2 7,-0.0 0.513 76.1 53.0-137.4 -57.3 2.3 4.3 0.9 4 4 A b S S- 0 0 74 1,-0.1 -2,-0.0 5,-0.1 5,-0.0 0.770 92.8-114.3 -54.8-116.0 -1.2 4.7 -0.3 5 5 A R S S+ 0 0 227 4,-0.0 -1,-0.1 0, 0.0 0, 0.0 0.383 91.5 6.4-155.2 -47.3 -3.5 2.5 1.9 6 6 A G S S+ 0 0 45 3,-0.1 3,-0.2 -4,-0.0 -2,-0.0 0.388 134.1 42.2-126.0 -3.6 -5.2 -0.4 0.1 7 7 A D S S+ 0 0 123 1,-0.1 2,-1.4 0, 0.0 0, 0.0 0.774 113.2 45.8-111.0 -47.2 -3.5 -0.2 -3.3 8 8 A b S S+ 0 0 35 2,-0.0 -5,-1.3 -6,-0.0 -1,-0.1 -0.372 87.9 153.2 -90.8 56.1 0.2 0.5 -2.5 9 9 A F - 0 0 124 -2,-1.4 -3,-0.1 -7,-0.2 -5,-0.1 -0.466 39.5-159.5 -85.2 160.0 0.1 -2.2 0.2 10 10 A a 0 0 85 -2,-0.1 -8,-0.1 -8,-0.1 -1,-0.1 -0.037 360.0 360.0-128.5 31.4 3.1 -4.2 1.3 11 11 A G 0 0 120 0, 0.0 -9,-0.1 0, 0.0 -2,-0.0 0.332 360.0 360.0 168.2 360.0 1.4 -7.3 2.8