==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 27-JAN-06 2FUU . COMPND 2 MOLECULE: BROMODOMAIN PHD FINGER TRANSCRIPTION FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.ILIN,D.J.PATEL . 77 2 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6043.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 40.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 10.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 105 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.8 3.8 23.5 -33.6 2 2 A P - 0 0 139 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.251 360.0-148.1 -54.8 134.1 4.5 25.4 -30.3 3 3 A L - 0 0 161 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.886 17.6-177.8-110.7 139.2 5.2 23.0 -27.4 4 4 A G - 0 0 79 -2,-0.4 2,-0.4 1,-0.3 -1,-0.2 0.862 64.0 -13.3 -94.7 -80.8 4.3 23.7 -23.7 5 5 A S - 0 0 110 2,-0.0 2,-0.8 0, 0.0 -1,-0.3 -0.972 60.9-123.1-129.8 144.2 5.5 20.9 -21.4 6 6 A D + 0 0 167 -2,-0.4 2,-0.3 -3,-0.1 -3,-0.0 -0.759 46.7 155.5 -89.0 110.5 6.8 17.4 -22.1 7 7 A T - 0 0 119 -2,-0.8 2,-0.2 0, 0.0 -2,-0.0 -0.847 25.3-150.6-130.5 167.1 4.6 14.9 -20.3 8 8 A K - 0 0 138 -2,-0.3 2,-0.2 1,-0.0 -2,-0.0 -0.729 9.9-130.6-129.2 178.6 3.7 11.2 -20.6 9 9 A L - 0 0 56 -2,-0.2 5,-0.1 1,-0.2 23,-0.0 -0.564 28.9 -93.0-122.4-175.2 0.8 8.9 -19.7 10 10 A Y S S+ 0 0 83 5,-0.3 4,-0.2 -2,-0.2 -1,-0.2 0.868 92.0 50.9 -67.3-109.7 0.3 5.6 -18.0 11 11 A a B >> S-A 15 0A 0 4,-0.5 3,-1.1 1,-0.2 4,-0.7 0.055 76.9-127.6 -36.4 134.2 0.2 2.4 -20.2 12 12 A I T 34 S+ 0 0 93 1,-0.3 -1,-0.2 2,-0.1 21,-0.1 0.558 107.4 78.9 -59.9 -7.4 3.2 2.1 -22.5 13 13 A C T 34 S- 0 0 41 2,-0.1 -1,-0.3 21,-0.0 -2,-0.1 0.007 114.7-109.9 -92.5 25.2 0.3 1.6 -24.9 14 14 A K T <4 S+ 0 0 181 -3,-1.1 -2,-0.1 -4,-0.2 -3,-0.1 0.934 72.6 132.5 42.5 72.4 -0.3 5.4 -25.0 15 15 A T B < -A 11 0A 35 -4,-0.7 -4,-0.5 3,-0.0 -5,-0.3 -0.926 47.2-136.7-152.0 123.6 -3.7 5.5 -23.1 16 16 A P - 0 0 83 0, 0.0 2,-0.1 0, 0.0 -5,-0.1 -0.048 52.4 -57.4 -69.6 177.2 -4.8 7.8 -20.3 17 17 A Y + 0 0 84 2,-0.1 2,-0.4 3,-0.0 5,-0.1 -0.364 56.6 176.1 -61.8 133.3 -6.6 6.6 -17.1 18 18 A D > - 0 0 77 3,-0.3 3,-5.7 -3,-0.1 -1,-0.0 -0.952 35.2-140.0-141.2 114.3 -9.9 4.9 -17.9 19 19 A E T 3 S+ 0 0 128 -2,-0.4 52,-0.1 1,-0.3 50,-0.1 0.469 109.3 63.7 -55.2 7.4 -11.9 3.4 -15.1 20 20 A S T 3 S+ 0 0 112 1,-0.0 2,-0.5 2,-0.0 -1,-0.3 0.433 95.6 69.1-105.8 -7.3 -12.4 0.7 -17.7 21 21 A K S < S- 0 0 37 -3,-5.7 2,-0.4 13,-0.0 -3,-0.3 -0.945 72.3-153.2-115.3 131.8 -8.7 0.0 -17.6 22 22 A F - 0 0 31 -2,-0.5 13,-1.4 46,-0.1 2,-0.2 -0.848 17.3-156.8-109.7 141.3 -7.1 -1.6 -14.6 23 23 A Y E -B 34 0B 0 44,-2.5 44,-0.4 -2,-0.4 2,-0.3 -0.638 21.7-156.2-116.8 175.7 -3.5 -1.0 -13.7 24 24 A I E -B 33 0B 0 9,-0.8 9,-1.1 42,-0.3 2,-0.5 -0.975 30.0-124.0-147.0 128.9 -0.4 -2.2 -12.0 25 25 A G E -BC 32 65B 0 40,-1.8 40,-0.7 -2,-0.3 7,-0.3 -0.721 26.6-110.7 -88.5 126.3 2.3 0.2 -10.9 26 26 A b > - 0 0 0 5,-4.9 4,-2.8 -2,-0.5 26,-0.2 -0.249 25.8-153.1 -47.7 113.2 5.9 -0.4 -12.0 27 27 A D T 4 S+ 0 0 69 24,-0.2 -1,-0.2 1,-0.2 25,-0.1 0.873 97.9 21.5 -63.1 -35.4 7.5 -1.5 -8.7 28 28 A R T 4 S+ 0 0 138 25,-0.1 -1,-0.2 3,-0.1 -2,-0.1 0.687 132.8 42.9-102.5 -27.3 10.8 -0.2 -10.0 29 29 A b T 4 S- 0 0 15 2,-0.2 -2,-0.2 -4,-0.0 3,-0.1 0.789 93.0-142.7 -89.4 -28.1 9.4 2.2 -12.7 30 30 A Q < + 0 0 141 -4,-2.8 2,-0.3 1,-0.3 -3,-0.1 0.732 61.0 106.1 74.1 25.7 6.6 3.6 -10.4 31 31 A N - 0 0 10 -7,-0.1 -5,-4.9 -21,-0.0 2,-0.4 -0.814 60.2-119.5-133.6 169.7 4.1 3.9 -13.3 32 32 A W E +B 25 0B 62 -7,-0.3 2,-0.3 -2,-0.3 -7,-0.2 -0.894 23.3 168.9-118.1 149.2 1.0 2.1 -14.5 33 33 A Y E -B 24 0B 1 -9,-1.1 -9,-0.8 -2,-0.4 34,-0.2 -0.924 47.0 -86.3-140.5 165.2 -0.3 0.2 -17.6 34 34 A H E >> -B 23 0B 5 -2,-0.3 4,-1.1 -11,-0.2 3,-0.7 -0.489 45.7-112.6 -71.7 143.4 -3.3 -1.9 -18.3 35 35 A G G >4>S+ 0 0 0 -13,-1.4 5,-2.1 1,-0.3 3,-0.9 0.895 122.8 36.6 -42.3 -49.7 -2.6 -5.5 -17.3 36 36 A R G >45S+ 0 0 170 3,-0.3 3,-2.4 1,-0.2 -1,-0.3 0.719 96.7 83.7 -76.4 -20.4 -2.7 -6.5 -21.0 37 37 A a G <45S+ 0 0 20 -3,-0.7 -1,-0.2 1,-0.3 -2,-0.2 0.823 108.5 27.5 -50.9 -28.0 -1.1 -3.2 -21.8 38 38 A V G <<5S- 0 0 38 -4,-1.1 -1,-0.3 -3,-0.9 -2,-0.2 0.175 128.3 -98.0-117.2 13.1 2.0 -5.2 -21.0 39 39 A G T < 5S+ 0 0 70 -3,-2.4 -3,-0.3 -5,-0.2 2,-0.2 0.924 75.9 143.5 72.0 46.7 0.5 -8.6 -21.9 40 40 A I < - 0 0 38 -5,-2.1 -1,-0.2 -6,-0.2 5,-0.1 -0.709 53.5 -83.5-114.8 168.0 -0.5 -9.7 -18.4 41 41 A L - 0 0 115 -2,-0.2 -1,-0.2 1,-0.1 4,-0.1 -0.073 32.3-125.6 -62.0 166.0 -3.4 -11.6 -16.9 42 42 A Q S > S+ 0 0 123 1,-0.2 3,-1.4 2,-0.1 4,-0.2 0.951 111.3 40.7 -79.3 -55.3 -6.6 -9.9 -16.0 43 43 A S G >> S+ 0 0 64 1,-0.3 3,-2.8 2,-0.2 4,-1.8 0.693 88.9 98.4 -66.2 -17.0 -6.9 -10.9 -12.4 44 44 A E G 34 S+ 0 0 37 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.702 75.0 63.9 -44.2 -19.8 -3.2 -10.2 -12.3 45 45 A A G <4 S+ 0 0 8 -3,-1.4 -1,-0.3 2,-0.1 -2,-0.2 0.882 114.0 27.2 -74.7 -38.9 -4.3 -6.9 -10.9 46 46 A E T <4 S+ 0 0 158 -3,-2.8 -2,-0.2 -4,-0.2 -3,-0.1 0.926 119.4 51.9 -87.5 -53.1 -5.9 -8.5 -7.7 47 47 A L S < S+ 0 0 94 -4,-1.8 2,-0.3 2,-0.0 -1,-0.2 0.266 101.6 93.5 -66.7 12.5 -3.8 -11.7 -7.3 48 48 A I + 0 0 21 -5,-0.3 18,-0.1 -3,-0.2 -3,-0.0 -0.857 27.3 142.2-117.3 150.4 -0.9 -9.4 -7.5 49 49 A D S S+ 0 0 114 -2,-0.3 -1,-0.1 16,-0.1 -4,-0.1 0.100 81.2 45.2-169.2 27.8 1.3 -7.6 -4.9 50 50 A E S S+ 0 0 172 2,-0.0 2,-0.1 14,-0.0 -23,-0.1 0.119 76.3 141.6-161.5 14.8 4.8 -7.8 -6.3 51 51 A Y - 0 0 20 -7,-0.1 14,-0.4 -6,-0.1 2,-0.3 -0.362 29.3-166.2 -68.1 147.3 4.2 -6.9 -9.9 52 52 A V - 0 0 16 -26,-0.2 -26,-0.2 -25,-0.1 -2,-0.0 -0.893 24.0-100.7-131.6 159.9 6.7 -4.8 -11.7 53 53 A c > - 0 0 0 -2,-0.3 4,-3.5 1,-0.1 5,-0.2 -0.437 18.9-133.2 -80.4 155.6 6.7 -2.9 -14.9 54 54 A P H > S+ 0 0 53 0, 0.0 4,-1.0 0, 0.0 -1,-0.1 0.747 108.0 55.9 -79.1 -23.1 8.3 -4.3 -18.0 55 55 A Q H 4 S+ 0 0 122 2,-0.2 4,-0.2 3,-0.1 -2,-0.0 0.880 121.7 28.3 -74.2 -39.0 9.9 -0.9 -18.7 56 56 A c H >> S+ 0 0 8 2,-0.1 3,-2.0 1,-0.1 4,-0.8 0.895 117.2 56.8 -86.9 -48.1 11.5 -1.0 -15.2 57 57 A Q H >X S+ 0 0 94 -4,-3.5 4,-2.2 1,-0.3 3,-0.6 0.810 89.9 77.4 -54.3 -31.1 11.8 -4.8 -14.7 58 58 A S H 3< S+ 0 0 88 -4,-1.0 -1,-0.3 1,-0.3 -2,-0.1 0.858 94.1 50.2 -48.3 -36.8 13.8 -4.9 -17.9 59 59 A T H <4 S+ 0 0 83 -3,-2.0 -1,-0.3 -4,-0.2 -2,-0.2 0.875 106.5 53.9 -70.1 -37.2 16.7 -3.5 -15.9 60 60 A E H << S+ 0 0 68 -4,-0.8 -2,-0.2 -3,-0.6 -1,-0.2 0.838 75.7 178.8 -65.2 -33.1 16.2 -6.2 -13.2 61 61 A D < 0 0 121 -4,-2.2 -3,-0.1 0, 0.0 -1,-0.1 0.783 360.0 360.0 31.0 41.8 16.4 -8.9 -16.0 62 62 A A 0 0 152 -5,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.181 360.0 360.0 43.1 360.0 15.9 -11.4 -13.1 63 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 64 1 B A 0 0 33 0, 0.0 2,-1.5 0, 0.0 -12,-0.1 0.000 360.0 360.0 360.0 173.2 3.5 -4.1 -5.4 65 2 B R B +C 25 0B 102 -40,-0.7 -40,-1.8 -14,-0.4 2,-0.1 -0.362 360.0 179.6 -86.6 56.7 1.9 -0.8 -6.4 66 3 B T - 0 0 22 -2,-1.5 2,-0.7 -42,-0.3 -42,-0.3 -0.401 15.2-154.8 -62.3 130.2 -1.0 -2.5 -8.0 67 4 B X + 0 0 46 -44,-0.4 -44,-2.5 -34,-0.2 2,-0.2 -0.876 34.0 141.4-112.4 97.9 -3.4 0.2 -9.3 68 5 B Q - 0 0 90 -2,-0.7 2,-0.3 -46,-0.2 -46,-0.1 -0.722 37.7-130.5-128.6 178.3 -6.9 -1.2 -9.5 69 6 B T + 0 0 67 -2,-0.2 -2,-0.0 -50,-0.1 -47,-0.0 -0.910 16.4 179.8-131.5 158.8 -10.5 -0.1 -9.0 70 7 B A > + 0 0 52 -2,-0.3 3,-1.2 3,-0.1 -1,-0.0 -0.071 33.0 137.2-150.1 37.1 -13.5 -1.4 -7.1 71 8 B R T 3 S+ 0 0 166 1,-0.3 -1,-0.0 -52,-0.1 -52,-0.0 0.840 70.2 66.1 -55.6 -35.3 -16.3 1.1 -7.7 72 9 B K T 3 S+ 0 0 182 2,-0.0 -1,-0.3 -3,-0.0 2,-0.2 0.858 93.0 73.0 -56.5 -36.5 -18.7 -1.8 -8.3 73 10 B S < - 0 0 66 -3,-1.2 -3,-0.1 1,-0.1 0, 0.0 -0.519 62.1-167.9 -81.4 149.2 -18.3 -2.8 -4.6 74 11 B T - 0 0 147 -2,-0.2 -1,-0.1 0, 0.0 2,-0.1 0.872 52.3 -70.7 -97.6 -70.3 -19.9 -0.7 -1.9 75 12 B G - 0 0 65 3,-0.0 2,-0.3 0, 0.0 3,-0.0 -0.267 37.3-143.7 165.3 101.1 -18.5 -1.8 1.5 76 13 B G - 0 0 64 1,-0.1 -3,-0.0 -2,-0.1 0, 0.0 -0.600 12.2-141.3 -79.5 133.5 -19.1 -5.1 3.3 77 14 B K 0 0 219 -2,-0.3 -1,-0.1 1,-0.3 0, 0.0 0.859 360.0 360.0 -59.9 -35.6 -19.3 -4.8 7.1 78 15 B A 0 0 155 -3,-0.0 -1,-0.3 0, 0.0 -2,-0.1 0.006 360.0 360.0-105.3 360.0 -17.4 -8.1 7.3