==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 08-FEB-06 2FYJ . COMPND 2 MOLECULE: LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.A.JENSEN,O.M.ANDERSEN,A.M.BONVIN,I.BJERRUM-BOHR, . 82 1 6 6 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5049.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 39.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 12.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 143 0, 0.0 2,-0.3 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 125.2 35.9 -3.7 -5.4 2 2 A A - 0 0 71 1,-0.1 2,-2.3 2,-0.0 0, 0.0 -0.588 360.0 -23.7 -71.1 127.9 35.8 -5.0 -1.8 3 3 A R S S- 0 0 138 -2,-0.3 -1,-0.1 1,-0.2 0, 0.0 -0.475 117.9 -64.7 70.1 -76.6 36.1 -2.0 0.6 4 4 A T S S+ 0 0 68 -2,-2.3 -1,-0.2 1,-0.8 13,-0.1 0.062 119.1 49.2-164.7 -67.7 37.9 0.2 -2.0 5 5 A a S S- 0 0 0 1,-0.2 -1,-0.8 4,-0.1 4,-0.2 -0.621 99.0 -86.3 -89.4 147.6 41.3 -1.0 -3.0 6 6 A P > - 0 0 51 0, 0.0 3,-2.0 0, 0.0 -1,-0.2 0.049 45.7 -96.1 -50.2 164.0 41.6 -4.7 -4.1 7 7 A P T 3 S+ 0 0 115 0, 0.0 -2,-0.1 0, 0.0 -4,-0.0 0.909 127.8 40.3 -50.4 -51.5 42.3 -7.5 -1.5 8 8 A N T 3 S+ 0 0 120 2,-0.1 12,-1.7 11,-0.0 2,-0.3 0.081 111.1 84.6 -86.9 26.2 46.1 -7.6 -1.9 9 9 A Q E < -A 19 0A 52 -3,-2.0 2,-0.4 10,-0.3 -4,-0.1 -0.961 69.6-138.2-135.6 145.3 45.9 -3.8 -2.1 10 10 A F E -A 18 0A 28 8,-3.7 8,-3.5 -2,-0.3 2,-0.8 -0.863 2.9-149.4-111.7 136.4 45.8 -1.1 0.5 11 11 A S E > -A 17 0A 13 -2,-0.4 3,-0.7 6,-0.2 6,-0.3 -0.895 16.5-170.4-105.0 103.5 43.7 2.1 0.5 12 12 A b T 3 S+ 0 0 5 4,-1.4 2,-0.5 -2,-0.8 -1,-0.2 0.967 85.1 9.7 -58.1 -93.3 45.7 4.7 2.3 13 13 A A T 3 S- 0 0 69 1,-0.1 2,-2.6 21,-0.0 -1,-0.3 -0.101 115.8-102.3 -75.8 35.9 43.5 7.7 2.9 14 14 A S S < S+ 0 0 77 -3,-0.7 -2,-0.1 -2,-0.5 -1,-0.1 -0.257 122.8 61.4 67.7 -47.5 40.8 5.3 1.8 15 15 A G S S+ 0 0 69 -2,-2.6 2,-0.4 -4,-0.1 -1,-0.2 0.732 88.0 79.6 -80.8 -22.6 40.8 7.0 -1.6 16 16 A R - 0 0 93 -11,-0.0 -4,-1.4 2,-0.0 2,-0.6 -0.746 67.3-160.9 -90.3 135.1 44.4 6.2 -2.4 17 17 A a E +A 11 0A 69 -2,-0.4 -6,-0.2 -6,-0.3 -2,-0.0 -0.923 22.8 151.0-129.8 103.3 44.9 2.7 -3.6 18 18 A I E -A 10 0A 10 -8,-3.5 -8,-3.7 -2,-0.6 2,-0.1 -0.797 50.1 -84.5-126.5 164.2 48.4 1.1 -3.5 19 19 A P E > -A 9 0A 46 0, 0.0 3,-1.5 0, 0.0 2,-0.6 -0.447 52.4-100.8 -70.1 147.5 49.7 -2.5 -3.1 20 20 A I T 3 S+ 0 0 53 -12,-1.7 -9,-0.0 1,-0.2 -11,-0.0 -0.620 108.9 54.1 -78.2 119.3 50.0 -3.8 0.4 21 21 A S T 3 S+ 0 0 0 -2,-0.6 -1,-0.2 27,-0.1 3,-0.2 -0.178 90.8 77.3 147.2 -26.3 53.6 -3.6 1.6 22 22 A W S < S+ 0 0 78 -3,-1.5 3,-0.4 1,-0.2 8,-0.3 0.478 74.0 84.6 -81.5 -7.2 53.8 0.1 0.8 23 23 A T S S+ 0 0 5 1,-0.3 2,-1.2 -4,-0.1 3,-0.4 0.985 95.2 36.9 -59.7 -62.1 51.8 0.7 4.0 24 24 A c S S+ 0 0 1 1,-0.2 -1,-0.3 -3,-0.2 12,-0.1 -0.745 81.7 122.9 -91.8 85.3 54.8 0.6 6.3 25 25 A D S S- 0 0 2 -2,-1.2 33,-0.3 -3,-0.4 3,-0.3 0.598 74.8-110.3-121.8 -22.0 57.2 2.4 3.9 26 26 A L - 0 0 65 -3,-0.4 2,-2.4 1,-0.2 32,-0.1 0.927 69.9 -46.7 78.4 82.4 58.4 5.4 6.0 27 27 A D S S+ 0 0 118 4,-0.8 -1,-0.2 1,-0.2 5,-0.1 -0.390 115.2 89.2 77.6 -66.7 57.0 8.6 4.4 28 28 A D S S+ 0 0 113 -2,-2.4 -1,-0.2 -3,-0.3 -2,-0.1 0.710 90.9 39.7 -49.1 -47.4 57.7 8.1 0.7 29 29 A D S S- 0 0 20 -7,-0.2 -1,-0.2 2,-0.1 -6,-0.1 1.000 143.1 -24.1 -64.9 -71.3 54.5 6.3 -0.4 30 30 A b S S- 0 0 43 -8,-0.3 3,-0.1 -7,-0.2 -2,-0.1 0.787 84.4-124.3-112.4 -56.7 51.7 8.0 1.5 31 31 A G - 0 0 15 1,-0.1 -4,-0.8 2,-0.0 -3,-0.1 -0.345 49.9 -59.6 152.5 -59.8 53.3 9.5 4.6 32 32 A D S >>S+ 0 0 65 -6,-0.1 5,-0.6 -5,-0.1 4,-0.5 0.140 94.8 107.8 171.1 -39.2 52.0 8.6 8.0 33 33 A R T 45S- 0 0 194 1,-0.2 -2,-0.0 3,-0.1 -21,-0.0 0.799 111.7 -27.4 -40.7 -59.4 48.3 9.7 8.1 34 34 A S T >5S+ 0 0 31 3,-0.1 4,-0.9 -11,-0.1 -1,-0.2 0.521 133.4 70.7-130.4 -24.3 46.8 6.2 8.0 35 35 A D T 45S+ 0 0 0 1,-0.2 5,-0.4 2,-0.2 -2,-0.1 0.850 116.0 24.8 -66.8 -34.2 49.5 4.2 6.1 36 36 A E T <5S+ 0 0 25 -4,-0.5 -1,-0.2 3,-0.1 3,-0.2 0.524 124.3 53.5-106.6 -9.8 51.8 4.3 9.1 37 37 A S T 4 - 0 0 2 -2,-0.8 3,-1.3 4,-0.7 17,-0.1 -0.307 10.8-134.0 -54.4 140.7 67.8 1.3 3.1 54 54 A N T 3 S+ 0 0 108 1,-0.3 -1,-0.1 2,-0.2 4,-0.1 0.643 100.7 71.1 -81.1 -15.0 71.2 1.3 4.9 55 55 A N T 3 S- 0 0 93 2,-0.0 -1,-0.3 1,-0.0 3,-0.1 0.612 129.2 -92.6 -69.9 -11.3 70.9 5.0 5.9 56 56 A G S < S+ 0 0 62 -3,-1.3 -2,-0.2 1,-0.4 2,-0.1 0.362 93.6 117.0 112.6 -1.4 68.3 3.7 8.3 57 57 A R - 0 0 88 -5,-0.1 -4,-0.7 -31,-0.0 -1,-0.4 -0.447 60.0-130.4 -89.6 166.5 65.4 4.3 6.0 58 58 A d E -B 52 0B 12 -33,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.950 29.2-176.1-114.6 141.6 63.0 1.7 4.6 59 59 A I E -B 51 0B 10 -8,-3.2 -8,-3.4 -2,-0.4 2,-0.1 -0.933 32.9 -84.8-137.0 161.7 62.3 1.7 0.9 60 60 A N E > -B 50 0B 4 -2,-0.3 3,-0.8 -10,-0.2 -10,-0.2 -0.383 35.6-127.5 -68.0 142.8 60.1 -0.1 -1.7 61 61 A I T 3 S+ 0 0 55 -12,-0.8 3,-0.5 1,-0.3 -11,-0.1 0.559 99.1 71.1 -70.0 -9.1 61.5 -3.4 -3.0 62 62 A N T 3 + 0 0 134 1,-0.2 -1,-0.3 -13,-0.2 -2,-0.1 0.024 69.5 89.5-102.5 29.7 61.1 -2.3 -6.6 63 63 A W < + 0 0 74 -3,-0.8 7,-3.3 7,-0.1 2,-0.6 0.199 50.0 133.6-108.9 12.0 63.9 0.3 -6.7 64 64 A R B +C 69 0C 109 -3,-0.5 5,-0.3 5,-0.3 -3,-0.0 -0.540 18.1 145.6 -60.4 110.1 66.5 -2.2 -7.7 65 65 A f S S+ 0 0 73 3,-1.6 -1,-0.2 -2,-0.6 4,-0.1 0.742 70.7 20.8-112.4 -69.1 68.4 -0.5 -10.6 66 66 A D S S- 0 0 82 2,-0.2 3,-0.1 1,-0.0 -2,-0.1 0.928 134.1 -64.3 -67.1 -46.7 72.1 -1.3 -10.7 67 67 A N S S+ 0 0 122 1,-0.6 2,-0.1 0, 0.0 -3,-0.1 0.093 120.7 53.0-179.5 -37.1 71.8 -4.5 -8.7 68 68 A D S S- 0 0 32 8,-0.2 -3,-1.6 -5,-0.1 2,-0.6 -0.311 97.6 -75.1-108.0-166.1 70.6 -3.2 -5.3 69 69 A N B -C 64 0C 0 -5,-0.3 7,-0.5 -2,-0.1 -5,-0.3 -0.839 45.5-113.2-111.5 112.1 67.6 -1.0 -4.4 70 70 A D + 0 0 35 -7,-3.3 -10,-0.1 -2,-0.6 -17,-0.1 0.017 60.1 129.1 -39.8 123.9 67.7 2.8 -5.0 71 71 A e - 0 0 28 -12,-0.1 -1,-0.2 -8,-0.0 -18,-0.0 0.385 59.6-118.8-140.9 -57.0 67.8 4.9 -1.8 72 72 A G S S+ 0 0 26 0, 0.0 7,-0.0 0, 0.0 -2,-0.0 0.834 77.7 69.3 109.5 70.0 70.5 7.5 -1.9 73 73 A D S S- 0 0 40 0, 0.0 -20,-0.0 0, 0.0 0, 0.0 -0.095 111.7 -46.1-161.0 -78.8 73.3 7.3 0.7 74 74 A N S S+ 0 0 127 0, 0.0 -21,-0.0 0, 0.0 0, 0.0 0.109 112.0 83.8-156.5 19.7 75.8 4.4 0.7 75 75 A S S S+ 0 0 27 -6,-0.1 -5,-0.1 -7,-0.0 -22,-0.0 0.849 99.6 5.4 -90.3 -97.0 73.5 1.4 0.2 76 76 A D S S- 0 0 11 -7,-0.5 -8,-0.2 1,-0.1 -6,-0.1 0.951 125.4 -63.7 -55.5 -57.6 72.3 0.4 -3.3 77 77 A E - 0 0 78 -8,-0.1 -1,-0.1 -10,-0.1 -7,-0.1 0.159 68.7-104.1-179.7 -20.1 74.4 2.9 -5.2 78 78 A A S S- 0 0 44 -9,-0.1 -8,-0.1 2,-0.1 -9,-0.0 0.624 92.9 -2.7 88.4 21.2 72.9 6.1 -3.9 79 79 A G - 0 0 24 2,-0.1 2,-1.4 -7,-0.0 -10,-0.0 0.420 61.5-132.9 130.1 95.7 70.8 7.0 -6.9 80 80 A f - 0 0 52 2,-0.0 2,-0.2 1,-0.0 -2,-0.1 -0.523 49.0-177.5 -66.2 93.4 70.5 5.3 -10.3 81 81 A S 0 0 97 -2,-1.4 -2,-0.1 0, 0.0 -1,-0.0 -0.604 360.0 360.0-105.5 159.3 70.8 8.5 -12.2 82 82 A H 0 0 270 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.771 360.0 360.0-156.6 360.0 70.8 9.5 -15.9