==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 14-FEB-06 2G1D . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S24E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM; . AUTHOR B.-Y.JEON,E.-M.HONG,J.-W.JUNG,A.YEE,C.H.ARROWSMITH,W.LEE . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8054.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 17.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 37 0, 0.0 2,-0.4 0, 0.0 24,-0.3 0.000 360.0 360.0 360.0 150.1 16.9 -2.6 2.2 2 2 A D E -A 24 0A 90 22,-0.9 22,-1.8 2,-0.1 2,-0.8 -0.920 360.0-166.2-135.5 109.2 16.3 1.2 2.6 3 3 A L E -A 23 0A 4 -2,-0.4 2,-0.7 20,-0.3 20,-0.3 -0.820 6.4-175.9-103.4 112.9 13.0 2.7 1.6 4 4 A I E -A 22 0A 79 18,-2.6 18,-1.5 -2,-0.8 2,-0.4 -0.891 19.0-165.1-103.8 113.8 12.7 6.4 1.2 5 5 A I E -A 21 0A 31 -2,-0.7 16,-0.2 16,-0.2 2,-0.2 -0.847 29.4-169.0-107.9 141.9 9.1 7.3 0.5 6 6 A K E -A 20 0A 151 14,-3.1 14,-0.7 -2,-0.4 15,-0.1 -0.572 34.4-166.1-120.1 60.1 7.4 10.4 -0.9 7 7 A E E -A 19 0A 74 12,-0.3 2,-0.3 -2,-0.2 12,-0.3 -0.067 18.7-178.0 -52.2 147.7 3.8 9.3 -0.0 8 8 A K E -A 18 0A 113 10,-1.3 10,-3.4 36,-0.1 2,-0.4 -0.918 11.7-166.2-148.8 112.3 0.7 10.9 -1.4 9 9 A R E -A 17 0A 182 -2,-0.3 2,-0.5 8,-0.3 8,-0.2 -0.905 14.7-176.7-116.0 139.5 -2.7 9.5 -0.3 10 10 A D E -A 16 0A 125 6,-1.4 6,-0.6 -2,-0.4 -2,-0.0 -0.975 9.7-169.7-126.6 115.6 -6.2 10.0 -1.5 11 11 A N + 0 0 96 -2,-0.5 6,-0.1 4,-0.3 -2,-0.0 -0.881 22.3 144.4-116.0 112.9 -9.0 8.3 0.4 12 12 A P S S- 0 0 78 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.387 80.7 -33.6-104.4-120.0 -12.5 8.2 -1.1 13 13 A I S S+ 0 0 115 1,-0.2 -2,-0.1 2,-0.0 85,-0.0 0.858 148.3 33.9 -72.0 -37.9 -14.8 5.3 -0.6 14 14 A L S S- 0 0 48 2,-0.0 59,-0.5 58,-0.0 60,-0.4 0.283 101.6-125.5-105.6 13.7 -11.9 2.8 -0.6 15 15 A K + 0 0 78 -3,-0.2 58,-0.9 1,-0.2 2,-0.4 0.926 43.0 178.9 47.2 54.6 -9.1 4.9 1.1 16 16 A R E -AB 10 72A 101 -6,-0.6 -6,-1.4 56,-0.1 2,-0.3 -0.750 6.5-167.9 -94.3 136.6 -6.6 4.4 -1.8 17 17 A K E -AB 9 71A 4 54,-1.5 54,-1.4 -2,-0.4 2,-0.4 -0.860 14.9-151.7-124.5 160.1 -3.2 6.1 -1.7 18 18 A E E +AB 8 70A 118 -10,-3.4 -10,-1.3 -2,-0.3 2,-0.3 -0.995 22.3 175.7-130.7 122.4 -0.3 6.7 -4.1 19 19 A I E -AB 7 69A 0 50,-1.9 50,-2.4 -2,-0.4 2,-0.5 -0.943 29.8-125.2-131.8 153.4 3.3 7.1 -2.9 20 20 A K E -AB 6 68A 82 -14,-0.7 -14,-3.1 -2,-0.3 2,-0.4 -0.797 37.5-178.2 -96.0 127.9 6.8 7.5 -4.3 21 21 A Y E +AB 5 67A 7 46,-2.3 46,-0.9 -2,-0.5 2,-0.4 -0.981 23.5 179.4-139.5 139.5 9.2 4.8 -3.1 22 22 A V E -AB 4 66A 8 -18,-1.5 -18,-2.6 -2,-0.4 2,-0.5 -0.993 12.7-163.4-132.4 124.5 12.9 3.8 -3.5 23 23 A L E -AB 3 65A 5 42,-2.2 42,-2.1 -2,-0.4 2,-0.6 -0.921 9.2-149.8-108.6 127.5 14.3 0.8 -1.7 24 24 A K E -AB 2 64A 75 -22,-1.8 -22,-0.9 -2,-0.5 2,-0.5 -0.870 16.5-166.6-101.4 120.3 18.0 0.5 -1.4 25 25 A F - 0 0 51 38,-0.9 2,-0.6 -2,-0.6 5,-0.0 -0.917 17.8-131.9-115.1 133.9 19.2 -3.0 -1.3 26 26 A D > - 0 0 105 -2,-0.5 3,-0.9 1,-0.1 2,-0.5 -0.710 29.5-118.1 -84.4 116.8 22.6 -4.2 -0.3 27 27 A S T 3 S+ 0 0 96 -2,-0.6 3,-0.1 1,-0.2 -1,-0.1 -0.364 91.5 69.2 -56.8 107.1 24.0 -6.7 -2.9 28 28 A S T 3 S+ 0 0 121 -2,-0.5 2,-0.3 1,-0.3 -1,-0.2 -0.058 93.1 33.2 178.8 -58.6 24.4 -9.9 -0.9 29 29 A R S < S- 0 0 205 -3,-0.9 -1,-0.3 1,-0.0 3,-0.1 -0.896 87.6 -93.8-122.1 151.5 21.0 -11.5 0.1 30 30 A T - 0 0 113 -2,-0.3 -4,-0.0 1,-0.1 -1,-0.0 -0.330 56.0 -90.2 -62.0 140.0 17.7 -11.6 -1.7 31 31 A P - 0 0 67 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.147 45.1-117.9 -51.1 142.0 15.3 -8.8 -0.7 32 32 A S > - 0 0 68 1,-0.1 4,-1.4 -3,-0.1 5,-0.4 -0.506 6.6-135.1 -84.3 154.3 13.0 -9.6 2.3 33 33 A R H > S+ 0 0 206 -2,-0.2 4,-1.9 2,-0.2 5,-0.3 0.933 105.8 35.5 -71.9 -48.3 9.2 -9.8 2.0 34 34 A E H >>S+ 0 0 127 3,-0.2 4,-2.5 2,-0.2 5,-1.0 0.871 114.0 57.9 -73.7 -40.3 8.5 -7.8 5.2 35 35 A E H >5S+ 0 0 68 3,-0.2 4,-1.1 2,-0.2 5,-0.2 0.952 120.2 27.0 -57.6 -51.7 11.5 -5.5 4.9 36 36 A I H X5S+ 0 0 35 -4,-1.4 4,-2.3 3,-0.2 5,-0.2 0.962 128.8 42.3 -74.9 -54.4 10.4 -4.1 1.5 37 37 A K H X5S+ 0 0 81 -4,-1.9 4,-2.0 -5,-0.4 5,-0.3 0.870 121.9 39.0 -62.8 -41.2 6.6 -4.7 1.8 38 38 A E H X5S+ 0 0 75 -4,-2.5 4,-3.3 -5,-0.3 5,-0.5 0.975 120.4 42.6 -76.1 -53.9 6.3 -3.5 5.4 39 39 A L H XS+ 0 0 0 -4,-2.0 5,-2.4 2,-0.2 4,-0.6 0.926 121.8 52.0 -71.1 -49.3 3.6 0.5 3.1 42 42 A K H >X5S+ 0 0 82 -4,-3.3 3,-1.7 -5,-0.3 4,-0.5 0.970 118.7 37.2 -55.0 -52.0 4.4 1.5 6.6 43 43 A H H 3<5S+ 0 0 83 -4,-1.5 -1,-0.2 -5,-0.5 -2,-0.2 0.929 105.3 73.2 -59.9 -45.2 6.6 4.3 5.4 44 44 A E H 3<5S- 0 0 2 -4,-2.1 -1,-0.3 -5,-0.3 -2,-0.2 0.620 128.1 -97.0 -42.6 -19.8 4.0 4.7 2.7 45 45 A G H <<5S+ 0 0 49 -3,-1.7 2,-0.3 -4,-0.6 -3,-0.2 0.689 97.2 81.2 103.3 22.8 1.8 6.1 5.3 46 46 A V S < S+ 0 0 109 1,-0.2 3,-1.1 2,-0.2 -1,-0.1 0.760 123.1 58.4 -68.2 -27.7 1.3 -4.0 6.1 49 49 A E T 3 S+ 0 0 66 1,-0.3 -1,-0.2 24,-0.1 23,-0.2 0.886 101.6 56.3 -68.4 -38.6 -2.3 -4.9 5.1 50 50 A L T 3 S+ 0 0 4 -3,-0.2 22,-0.9 21,-0.1 2,-0.8 0.231 80.5 118.9 -76.6 10.9 -2.5 -1.8 3.0 51 51 A V E < +C 71 0A 7 -3,-1.1 2,-0.4 20,-0.2 20,-0.2 -0.730 22.5 149.0 -93.2 114.5 0.6 -2.7 0.9 52 52 A I E +C 70 0A 39 18,-2.6 18,-2.3 -2,-0.8 2,-0.5 -0.934 15.8 173.2-133.6 105.6 0.0 -3.2 -2.8 53 53 A V + 0 0 44 -2,-0.4 2,-0.3 16,-0.2 16,-0.2 -0.903 2.5 167.9-127.7 114.0 3.0 -2.3 -5.0 54 54 A D + 0 0 104 -2,-0.5 14,-0.3 14,-0.3 -2,-0.0 -0.870 52.2 10.5-115.9 149.2 3.2 -2.9 -8.8 55 55 A N - 0 0 105 -2,-0.3 13,-0.4 1,-0.1 2,-0.3 0.470 62.2-146.6 61.0 147.0 5.7 -1.6 -11.3 56 56 A N - 0 0 82 11,-0.2 2,-0.7 13,-0.0 11,-0.3 -0.831 4.9-145.5-153.0 109.5 8.9 0.2 -10.2 57 57 A K - 0 0 99 -2,-0.3 2,-0.9 8,-0.1 9,-0.5 -0.645 19.1-150.7 -77.7 113.5 10.6 3.1 -12.1 58 58 A Q + 0 0 94 -2,-0.7 2,-0.5 7,-0.2 7,-0.1 -0.762 24.0 167.4 -92.1 106.2 14.3 2.6 -11.6 59 59 A L + 0 0 73 -2,-0.9 8,-0.0 1,-0.1 -2,-0.0 -0.946 52.0 48.5-121.7 112.8 16.1 6.0 -11.7 60 60 A T S S- 0 0 77 -2,-0.5 -1,-0.1 2,-0.1 5,-0.1 -0.192 78.9-128.2 161.7 -56.6 19.8 6.2 -10.6 61 61 A G S S+ 0 0 74 3,-0.3 -2,-0.0 0, 0.0 -3,-0.0 0.722 82.2 93.5 87.4 23.2 21.9 3.5 -12.1 62 62 A K S S- 0 0 143 2,-0.2 -2,-0.1 0, 0.0 3,-0.0 0.735 100.9 -75.1-107.6 -82.6 23.3 2.3 -8.8 63 63 A H S S+ 0 0 98 1,-0.1 -38,-0.9 -37,-0.0 2,-0.3 0.236 92.5 97.3-174.2 21.8 21.4 -0.6 -7.1 64 64 A E E -B 24 0A 29 -40,-0.2 2,-0.4 -63,-0.0 -3,-0.3 -0.859 60.4-131.4-122.3 154.4 18.2 0.8 -5.6 65 65 A I E -B 23 0A 30 -42,-2.1 -42,-2.2 -2,-0.3 2,-0.3 -0.920 18.6-173.2-115.2 135.6 14.7 0.8 -7.1 66 66 A E E +B 22 0A 51 -9,-0.5 2,-0.3 -2,-0.4 -44,-0.2 -0.747 26.0 108.3-117.3 163.9 12.2 3.6 -7.4 67 67 A G E -B 21 0A 0 -46,-0.9 -46,-2.3 -11,-0.3 2,-0.4 -0.990 61.9 -57.5 164.8-158.2 8.6 3.7 -8.5 68 68 A Y E -B 20 0A 95 -13,-0.4 2,-0.4 -14,-0.3 -14,-0.3 -0.975 39.5-158.3-124.2 134.1 5.1 4.1 -7.3 69 69 A T E -B 19 0A 1 -50,-2.4 -50,-1.9 -2,-0.4 2,-0.4 -0.843 6.0-146.1-111.8 147.1 3.4 2.0 -4.7 70 70 A K E -BC 18 52A 43 -18,-2.3 -18,-2.6 -2,-0.4 2,-0.4 -0.869 15.4-162.0-109.8 142.0 -0.3 1.5 -4.2 71 71 A I E -BC 17 51A 0 -54,-1.4 -54,-1.5 -2,-0.4 2,-0.5 -0.985 10.9-157.9-133.4 141.0 -1.9 1.0 -0.7 72 72 A Y E -B 16 0A 64 -22,-0.9 3,-0.4 -2,-0.4 -56,-0.1 -0.945 8.9-179.3-116.9 119.5 -5.2 -0.4 0.6 73 73 A A S > S+ 0 0 28 -58,-0.9 4,-0.7 -2,-0.5 -58,-0.1 0.508 79.9 69.8 -89.5 -8.1 -6.4 0.6 4.0 74 74 A D H > S+ 0 0 45 -60,-0.4 4,-2.3 1,-0.2 5,-0.2 0.580 77.5 82.7 -85.4 -11.2 -9.5 -1.6 3.7 75 75 A K H > S+ 0 0 74 -3,-0.4 4,-1.4 2,-0.2 -1,-0.2 0.922 97.0 38.2 -58.6 -47.9 -7.5 -4.8 3.9 76 76 A P H > S+ 0 0 33 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.928 115.1 52.0 -71.0 -46.1 -7.3 -4.7 7.7 77 77 A S H X S+ 0 0 75 -4,-0.7 4,-1.6 1,-0.2 -2,-0.2 0.880 112.9 46.6 -57.7 -39.1 -10.9 -3.5 8.3 78 78 A A H X S+ 0 0 36 -4,-2.3 4,-1.4 1,-0.2 -1,-0.2 0.838 111.5 51.3 -72.2 -34.0 -12.1 -6.3 6.0 79 79 A M H < S+ 0 0 131 -4,-1.4 -2,-0.2 -5,-0.2 -1,-0.2 0.847 109.6 49.9 -71.3 -35.6 -10.0 -8.9 7.8 80 80 A L H < S+ 0 0 142 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.883 125.1 27.6 -70.6 -40.1 -11.2 -7.8 11.2 81 81 A Y H < S- 0 0 129 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.518 109.9-129.2 -98.5 -8.7 -14.9 -8.0 10.2 82 82 A E >< - 0 0 103 -4,-1.4 3,-1.2 -5,-0.2 -3,-0.2 0.686 5.3-122.6 63.7 127.3 -14.3 -10.6 7.5 83 83 A P T 3 S+ 0 0 114 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.738 112.2 57.0 -71.4 -23.0 -15.8 -10.0 4.0 84 84 A D T 3 S+ 0 0 148 2,-0.1 2,-0.4 3,-0.0 -2,-0.1 0.238 89.6 99.9 -91.7 13.2 -17.8 -13.2 4.2 85 85 A Y S < S- 0 0 142 -3,-1.2 2,-0.8 -4,-0.2 3,-0.1 -0.828 88.5-102.4-104.0 139.3 -19.5 -12.1 7.4 86 86 A E + 0 0 150 -2,-0.4 -2,-0.1 1,-0.2 -1,-0.0 -0.408 46.6 167.6 -60.2 100.4 -23.0 -10.6 7.4 87 87 A L S S- 0 0 116 -2,-0.8 -1,-0.2 -4,-0.2 -3,-0.0 0.840 72.3 -60.0 -84.0 -37.1 -22.2 -6.9 7.8 88 88 A I - 0 0 125 -3,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.133 54.9-140.7-175.7 -44.4 -25.8 -5.7 7.0 89 89 A R S S+ 0 0 181 1,-0.1 -3,-0.0 0, 0.0 0, 0.0 0.990 76.4 79.4 60.4 81.3 -26.8 -6.8 3.5 90 90 A N S S- 0 0 150 2,-0.0 2,-0.1 0, 0.0 -1,-0.1 0.146 79.8-132.0-176.6 -41.0 -28.8 -3.9 2.2 91 91 A G - 0 0 52 2,-0.0 2,-0.2 6,-0.0 6,-0.0 -0.265 28.7 -68.6 95.5 174.9 -26.3 -1.2 0.9 92 92 A L - 0 0 147 -2,-0.1 5,-0.0 5,-0.1 -2,-0.0 -0.560 30.2-175.2-102.1 168.3 -26.1 2.5 1.5 93 93 A K + 0 0 176 -2,-0.2 2,-0.9 3,-0.1 4,-0.1 -0.237 23.4 148.6-161.0 59.3 -28.3 5.4 0.3 94 94 A Q S S- 0 0 164 2,-0.6 -2,-0.0 1,-0.1 4,-0.0 -0.388 92.0 -66.9 -95.2 55.5 -26.9 8.8 1.2 95 95 A K S S+ 0 0 189 -2,-0.9 2,-0.2 2,-0.0 -1,-0.1 0.485 127.0 29.5 75.7 2.7 -28.4 10.6 -1.8 96 96 A E - 0 0 137 1,-0.1 -2,-0.6 0, 0.0 -3,-0.1 -0.706 65.9-138.9 172.4 134.0 -26.0 8.5 -4.0 97 97 A A 0 0 100 1,-0.3 -5,-0.1 -2,-0.2 -1,-0.1 0.808 360.0 360.0 -70.9 -30.3 -24.3 5.1 -4.0 98 98 A K 0 0 168 -3,-0.1 -1,-0.3 -85,-0.0 -3,-0.0 -0.864 360.0 360.0-138.7 360.0 -21.1 6.6 -5.3