==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION, DNA BINDING PROTEIN 29-JAN-09 3G1C . COMPND 2 MOLECULE: THE TRPR LIKE PROTEIN FROM EUBACTERIUM ELIGENS AT . SOURCE 2 ORGANISM_SCIENTIFIC: EUBACTERIUM ELIGENS; . AUTHOR R.ZHANG,R.HENDRICKS,L.FREEMAN,G.BABNIGG,A.JOACHIMIAK,MIDWEST . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8036.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 70.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 57 58.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A N > 0 0 144 0, 0.0 3,-1.4 0, 0.0 4,-0.4 0.000 360.0 360.0 360.0 -53.0 15.6 4.8 37.9 2 3 A N G > + 0 0 151 1,-0.3 3,-1.3 2,-0.2 0, 0.0 0.882 360.0 54.5 -53.5 -39.3 16.1 5.8 41.6 3 4 A K G 3 S+ 0 0 191 1,-0.3 -1,-0.3 3,-0.0 0, 0.0 0.698 103.9 58.0 -68.4 -18.3 12.4 4.8 42.2 4 5 A L G < S+ 0 0 97 -3,-1.4 2,-1.7 1,-0.1 -1,-0.3 0.430 74.4 97.9 -93.0 -2.3 13.2 1.4 40.8 5 6 A K < + 0 0 150 -3,-1.3 2,-0.3 -4,-0.4 -1,-0.1 -0.533 61.2 124.2 -88.8 77.7 16.0 0.5 43.2 6 7 A T S > S- 0 0 56 -2,-1.7 4,-2.2 1,-0.1 5,-0.1 -0.886 72.8-125.8-137.9 152.9 13.7 -1.5 45.4 7 8 A Q H > S+ 0 0 125 -2,-0.3 4,-2.5 2,-0.2 5,-0.2 0.845 113.8 58.8 -74.7 -31.7 13.7 -5.0 46.6 8 9 A A H > S+ 0 0 71 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.924 108.0 45.1 -56.0 -48.5 10.2 -5.4 45.2 9 10 A V H > S+ 0 0 31 1,-0.2 4,-2.7 2,-0.2 -2,-0.2 0.937 111.5 53.2 -65.0 -43.8 11.6 -4.5 41.7 10 11 A E H X S+ 0 0 105 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.859 109.1 48.2 -61.2 -39.2 14.6 -6.8 42.2 11 12 A Q H X S+ 0 0 132 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.860 108.0 54.5 -70.8 -38.5 12.2 -9.8 43.1 12 13 A L H X S+ 0 0 74 -4,-1.9 4,-2.6 2,-0.2 -2,-0.2 0.983 111.2 47.3 -50.9 -51.2 10.1 -9.1 40.0 13 14 A F H X S+ 0 0 114 -4,-2.7 4,-3.3 1,-0.3 -2,-0.2 0.874 110.8 49.5 -64.5 -35.7 13.3 -9.3 37.9 14 15 A Q H X S+ 0 0 142 -4,-2.2 4,-0.7 1,-0.2 -1,-0.3 0.889 111.2 50.4 -68.7 -39.9 14.4 -12.5 39.6 15 16 A A H >< S+ 0 0 32 -4,-2.3 3,-0.8 2,-0.2 4,-0.4 0.933 113.5 45.9 -55.5 -46.6 11.0 -14.0 39.0 16 17 A I H >< S+ 0 0 47 -4,-2.6 3,-1.7 1,-0.3 -2,-0.2 0.954 112.2 50.1 -68.8 -46.8 11.2 -12.9 35.3 17 18 A L H 3< S+ 0 0 139 -4,-3.3 -1,-0.3 1,-0.3 -2,-0.2 0.599 101.7 63.6 -68.5 -9.0 14.8 -14.2 34.9 18 19 A S T << S+ 0 0 75 -3,-0.8 -1,-0.3 -4,-0.7 -2,-0.2 0.574 74.1 113.5 -87.0 -10.6 13.8 -17.6 36.4 19 20 A L < - 0 0 44 -3,-1.7 3,-0.1 -4,-0.4 -3,-0.0 -0.426 49.6-167.0 -64.8 131.5 11.4 -18.3 33.5 20 21 A K + 0 0 172 1,-0.2 2,-0.3 -2,-0.1 -1,-0.1 0.667 57.5 0.6 -99.9 -21.2 12.8 -21.2 31.5 21 22 A D S >> S- 0 0 68 1,-0.0 4,-2.3 0, 0.0 3,-0.6 -0.975 79.0 -87.7-160.4 173.9 10.8 -21.2 28.3 22 23 A L H 3> S+ 0 0 131 -2,-0.3 4,-2.4 1,-0.3 5,-0.1 0.752 120.1 56.7 -65.2 -29.4 8.0 -19.5 26.4 23 24 A D H 3> S+ 0 0 119 2,-0.2 4,-2.0 1,-0.2 -1,-0.3 0.884 109.8 46.8 -66.7 -36.7 5.2 -21.5 27.9 24 25 A E H <> S+ 0 0 63 -3,-0.6 4,-3.1 2,-0.2 -2,-0.2 0.910 110.8 53.3 -67.4 -43.1 6.4 -20.4 31.3 25 26 A A H X S+ 0 0 29 -4,-2.3 4,-2.6 1,-0.2 5,-0.4 0.922 109.5 48.1 -56.1 -49.2 6.7 -16.8 30.0 26 27 A Y H X S+ 0 0 149 -4,-2.4 4,-1.8 2,-0.2 -1,-0.2 0.926 113.4 47.3 -57.4 -48.4 3.1 -17.0 28.8 27 28 A D H X S+ 0 0 105 -4,-2.0 4,-1.3 2,-0.2 -2,-0.2 0.955 117.1 42.4 -57.9 -52.5 1.8 -18.4 32.1 28 29 A F H >X S+ 0 0 50 -4,-3.1 4,-2.4 2,-0.2 3,-0.6 0.967 116.2 44.1 -61.7 -57.3 3.7 -15.8 34.2 29 30 A F H 3X S+ 0 0 57 -4,-2.6 4,-2.6 1,-0.3 -1,-0.2 0.842 112.1 54.1 -64.9 -30.4 3.0 -12.6 32.1 30 31 A E H 3< S+ 0 0 109 -4,-1.8 -1,-0.3 -5,-0.4 -2,-0.2 0.831 110.3 47.7 -70.8 -29.0 -0.6 -13.5 31.7 31 32 A D H << S+ 0 0 142 -4,-1.3 -2,-0.2 -3,-0.6 -1,-0.2 0.933 121.4 35.3 -72.6 -41.2 -0.9 -13.8 35.5 32 33 A V H < S+ 0 0 80 -4,-2.4 2,-0.3 -5,-0.1 -2,-0.2 0.724 119.6 42.4 -84.8 -27.2 0.9 -10.5 36.1 33 34 A C S < S- 0 0 28 -4,-2.6 2,-0.1 -5,-0.2 3,-0.0 -0.819 76.3-112.8-122.1 161.6 -0.4 -8.4 33.2 34 35 A T > - 0 0 72 -2,-0.3 4,-2.3 1,-0.1 5,-0.2 -0.425 37.5-109.6 -79.4 163.1 -3.5 -7.7 31.2 35 36 A I H > S+ 0 0 115 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.945 119.9 51.9 -60.6 -44.2 -3.7 -8.8 27.6 36 37 A N H > S+ 0 0 121 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.828 106.2 52.7 -66.3 -34.3 -3.4 -5.3 26.5 37 38 A E H > S+ 0 0 96 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.938 111.4 45.8 -64.3 -46.9 -0.4 -4.6 28.5 38 39 A I H X S+ 0 0 53 -4,-2.3 4,-2.2 2,-0.2 5,-0.2 0.954 113.6 50.0 -61.7 -45.2 1.4 -7.6 27.0 39 40 A L H X S+ 0 0 100 -4,-3.2 4,-2.0 1,-0.2 -1,-0.2 0.883 109.6 53.2 -59.3 -33.2 0.2 -6.5 23.5 40 41 A S H X S+ 0 0 40 -4,-2.2 4,-1.8 -5,-0.2 -1,-0.2 0.891 109.7 45.4 -72.8 -35.9 1.5 -3.0 24.3 41 42 A L H X S+ 0 0 88 -4,-2.0 4,-2.2 -3,-0.2 -1,-0.2 0.839 112.2 51.4 -74.0 -39.1 5.0 -4.2 25.2 42 43 A S H X S+ 0 0 61 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.836 109.1 52.2 -65.8 -36.0 5.2 -6.5 22.2 43 44 A Q H X S+ 0 0 48 -4,-2.0 4,-2.8 -5,-0.2 5,-0.2 0.921 110.1 47.8 -61.8 -46.6 4.2 -3.6 19.9 44 45 A R H X S+ 0 0 101 -4,-1.8 4,-2.2 1,-0.2 -2,-0.2 0.920 111.5 50.3 -62.1 -41.1 6.9 -1.4 21.4 45 46 A F H X S+ 0 0 66 -4,-2.2 4,-2.1 2,-0.2 -1,-0.2 0.938 112.5 46.1 -63.4 -42.7 9.5 -4.1 21.0 46 47 A E H X S+ 0 0 50 -4,-2.1 4,-2.8 1,-0.2 5,-0.3 0.922 110.9 53.1 -67.3 -43.0 8.5 -4.7 17.3 47 48 A V H X S+ 0 0 0 -4,-2.8 4,-2.5 1,-0.2 -1,-0.2 0.938 109.9 50.1 -52.1 -44.1 8.5 -0.9 16.6 48 49 A A H X S+ 0 0 0 -4,-2.2 4,-1.6 1,-0.2 -2,-0.2 0.894 111.2 46.0 -69.5 -42.3 12.0 -0.8 18.0 49 50 A K H X S+ 0 0 60 -4,-2.1 4,-1.7 2,-0.2 -1,-0.2 0.930 113.8 48.2 -60.4 -47.8 13.2 -3.7 15.9 50 51 A M H <>S+ 0 0 11 -4,-2.8 5,-2.0 1,-0.2 -2,-0.2 0.885 108.1 57.3 -66.1 -32.8 11.7 -2.3 12.7 51 52 A L H ><5S+ 0 0 21 -4,-2.5 3,-1.1 -5,-0.3 -1,-0.2 0.914 109.3 44.1 -65.2 -38.1 13.2 1.1 13.5 52 53 A R H 3<5S+ 0 0 76 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.702 104.2 63.2 -80.4 -21.5 16.6 -0.4 13.6 53 54 A E T 3<5S- 0 0 34 -4,-1.7 -1,-0.3 -5,-0.1 -2,-0.2 0.379 118.1-116.3 -75.6 4.5 15.8 -2.3 10.4 54 55 A H T < 5 + 0 0 173 -3,-1.1 -3,-0.2 1,-0.2 -2,-0.1 0.703 59.9 155.2 70.9 25.1 15.5 1.2 8.9 55 56 A R < - 0 0 96 -5,-2.0 -1,-0.2 1,-0.1 2,-0.1 -0.414 44.1-106.5 -81.2 158.2 11.9 1.0 8.0 56 57 A T > - 0 0 77 -2,-0.1 4,-1.9 1,-0.1 5,-0.2 -0.382 26.8-110.5 -81.1 163.3 9.7 4.1 7.6 57 58 A Y H > S+ 0 0 86 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.865 117.6 56.4 -63.0 -36.3 7.1 5.2 10.2 58 59 A L H > S+ 0 0 117 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.909 108.5 45.1 -58.4 -49.5 4.4 4.3 7.7 59 60 A D H > S+ 0 0 52 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.800 114.6 48.9 -65.2 -32.4 5.5 0.8 7.3 60 61 A I H X S+ 0 0 0 -4,-1.9 4,-2.5 2,-0.2 5,-0.5 0.931 110.6 50.3 -71.7 -46.8 5.9 0.4 11.0 61 62 A A H X S+ 0 0 28 -4,-3.2 4,-1.5 1,-0.2 -2,-0.2 0.870 114.1 46.8 -60.5 -34.7 2.5 1.8 11.7 62 63 A E H < S+ 0 0 137 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.957 116.9 39.2 -68.3 -52.7 1.0 -0.6 9.2 63 64 A K H < S+ 0 0 131 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.804 129.3 28.5 -70.9 -30.8 2.7 -3.7 10.3 64 65 A T H < S- 0 0 19 -4,-2.5 -3,-0.2 2,-0.1 -1,-0.2 0.679 92.5-128.2-107.9 -23.1 2.5 -3.1 14.1 65 66 A G < + 0 0 55 -4,-1.5 -4,-0.2 -5,-0.5 -3,-0.1 0.262 58.2 145.5 89.1 -12.1 -0.6 -1.0 14.5 66 67 A A - 0 0 4 -6,-0.4 -1,-0.3 -23,-0.1 -2,-0.1 -0.244 50.7-123.5 -61.0 143.5 1.4 1.6 16.6 67 68 A S > - 0 0 60 1,-0.1 4,-2.1 -3,-0.1 5,-0.1 -0.446 28.5-110.0 -74.1 163.5 0.4 5.2 16.2 68 69 A T H > S+ 0 0 83 1,-0.2 4,-2.6 2,-0.2 5,-0.1 0.777 120.5 60.0 -72.8 -22.7 3.3 7.5 15.1 69 70 A A H > S+ 0 0 52 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.937 106.4 46.2 -65.3 -46.9 3.3 9.0 18.6 70 71 A T H > S+ 0 0 20 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.899 111.8 52.5 -57.4 -42.8 4.0 5.5 20.0 71 72 A I H X S+ 0 0 0 -4,-2.1 4,-2.2 1,-0.2 -2,-0.2 0.940 109.5 48.4 -61.4 -43.7 6.7 5.1 17.3 72 73 A S H X S+ 0 0 35 -4,-2.6 4,-1.7 2,-0.2 -2,-0.2 0.931 110.5 50.8 -64.0 -43.1 8.3 8.4 18.3 73 74 A R H X S+ 0 0 141 -4,-2.4 4,-1.6 1,-0.2 3,-0.5 0.948 111.4 47.8 -57.3 -49.6 8.2 7.5 22.0 74 75 A V H X S+ 0 0 5 -4,-2.5 4,-2.5 1,-0.2 -1,-0.2 0.899 106.9 58.6 -57.3 -41.7 9.9 4.1 21.4 75 76 A N H X S+ 0 0 46 -4,-2.2 4,-1.9 -5,-0.3 -1,-0.2 0.878 102.4 52.8 -61.6 -33.5 12.4 5.9 19.2 76 77 A R H X S+ 0 0 144 -4,-1.7 4,-3.0 -3,-0.5 -1,-0.2 0.949 111.7 45.3 -62.9 -45.4 13.4 8.1 22.2 77 78 A S H < S+ 0 0 73 -4,-1.6 6,-0.5 1,-0.2 4,-0.4 0.821 112.1 52.9 -67.5 -30.2 14.0 5.0 24.4 78 79 A L H < S+ 0 0 1 -4,-2.5 3,-0.3 -5,-0.2 -1,-0.2 0.917 121.9 28.4 -69.4 -41.1 15.9 3.3 21.6 79 80 A N H < S+ 0 0 58 -4,-1.9 -2,-0.2 -5,-0.2 -3,-0.2 0.748 131.8 30.8 -96.4 -27.4 18.3 6.1 21.0 80 81 A Y S < S+ 0 0 198 -4,-3.0 -1,-0.2 -5,-0.2 -2,-0.1 -0.187 105.2 80.8-126.9 39.5 18.5 7.9 24.3 81 82 A G S S- 0 0 34 -4,-0.4 -3,-0.1 -3,-0.3 -4,-0.1 -0.161 100.1 -63.8-123.9-147.3 18.0 5.0 26.8 82 83 A N - 0 0 166 -5,-0.1 -4,-0.1 -2,-0.1 -3,-0.1 0.321 65.0-113.6 -92.5 4.6 20.1 2.2 28.2 83 84 A D S > S+ 0 0 95 -6,-0.5 4,-1.5 -5,-0.1 5,-0.1 0.745 74.3 135.8 63.9 27.5 20.8 0.4 24.9 84 85 A G H > + 0 0 42 2,-0.2 4,-1.9 1,-0.1 5,-0.2 0.840 65.9 51.1 -70.5 -39.2 18.8 -2.5 26.1 85 86 A Y H > S+ 0 0 54 -8,-0.2 4,-2.8 1,-0.2 5,-0.2 0.990 112.3 48.2 -60.0 -49.8 16.8 -3.0 22.8 86 87 A D H > S+ 0 0 45 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.835 107.9 52.8 -63.2 -36.2 20.0 -3.0 20.8 87 88 A R H X S+ 0 0 162 -4,-1.5 4,-2.7 2,-0.2 -1,-0.3 0.936 111.1 46.9 -70.6 -39.7 21.8 -5.4 23.0 88 89 A V H X S+ 0 0 50 -4,-1.9 4,-3.2 2,-0.2 5,-0.2 0.952 112.0 51.4 -60.2 -46.8 18.9 -7.9 22.7 89 90 A F H X>S+ 0 0 4 -4,-2.8 5,-1.9 1,-0.2 4,-0.7 0.939 114.1 43.9 -60.3 -44.4 18.8 -7.4 18.8 90 91 A E H ><5S+ 0 0 168 -4,-2.6 3,-0.8 1,-0.2 -1,-0.2 0.939 116.4 47.0 -61.5 -48.0 22.5 -8.1 18.6 91 92 A R H 3<5S+ 0 0 170 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.898 118.0 39.0 -65.2 -42.3 22.3 -11.0 20.9 92 93 A L H 3<5S- 0 0 106 -4,-3.2 -1,-0.2 -5,-0.2 -2,-0.2 0.396 102.6-126.8 -91.3 3.7 19.4 -12.7 19.3 93 94 A G T <<5 + 0 0 66 -3,-0.8 -3,-0.2 -4,-0.7 -4,-0.1 0.898 58.7 149.0 56.2 44.7 20.5 -11.9 15.7 94 95 A M < + 0 0 74 -5,-1.9 2,-0.5 -6,-0.2 -4,-0.1 0.650 23.0 103.1 -89.1 -22.3 17.1 -10.4 15.2 95 96 A L S S- 0 0 63 -6,-0.4 2,-0.4 1,-0.1 -45,-0.1 -0.561 75.5-119.7 -78.0 120.9 17.5 -7.6 12.7 96 97 A E 0 0 159 -2,-0.5 -1,-0.1 1,-0.1 -2,-0.1 -0.446 360.0 360.0 -51.5 111.0 16.4 -8.4 9.1 97 98 A K 0 0 252 -2,-0.4 -1,-0.1 -3,-0.0 -3,-0.0 0.848 360.0 360.0 -79.4 360.0 19.6 -8.1 7.0