==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 29-JAN-09 3G1E . COMPND 2 MOLECULE: VIMENTIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.MEIER,G.P.PADILLA,H.HERRMANN,T.WEDIG,M.HERGT,T.R.PATEL, . 74 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6240.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 85.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 61 82.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 102 A N 0 0 152 0, 0.0 5,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 -56.2 2.5 35.6 -10.7 2 103 A E >> + 0 0 121 1,-0.3 4,-0.9 2,-0.2 3,-0.8 0.919 360.0 45.1 -55.8 -34.2 1.0 32.1 -10.7 3 104 A K H 3> S+ 0 0 71 1,-0.3 4,-0.8 2,-0.2 -1,-0.3 0.657 110.9 53.7 -76.8 -19.1 4.5 31.5 -9.5 4 105 A V H 34 S+ 0 0 90 2,-0.2 -1,-0.3 1,-0.1 -2,-0.2 -0.251 111.4 43.4-109.8 40.8 4.1 34.6 -7.3 5 106 A E H <> S+ 0 0 109 -3,-0.8 4,-1.0 3,-0.0 -2,-0.2 0.223 109.7 55.3-151.9 -21.1 1.0 33.2 -5.6 6 107 A L H X S+ 0 0 68 -4,-0.9 4,-2.3 -5,-0.3 5,-0.2 0.818 105.1 53.4 -85.7 -38.0 2.3 29.7 -5.2 7 108 A Q H X S+ 0 0 127 -4,-0.8 4,-2.1 2,-0.2 5,-0.2 0.933 108.7 49.8 -61.9 -44.9 5.3 30.9 -3.3 8 109 A E H > S+ 0 0 113 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.906 108.1 54.7 -58.6 -42.4 3.0 32.8 -0.9 9 110 A L H X S+ 0 0 40 -4,-1.0 4,-1.5 1,-0.2 -1,-0.2 0.906 109.7 45.5 -58.1 -45.4 1.0 29.6 -0.5 10 111 A N H X S+ 0 0 99 -4,-2.3 4,-1.8 1,-0.2 -1,-0.2 0.818 111.2 54.2 -69.2 -31.6 4.1 27.7 0.6 11 112 A D H X S+ 0 0 83 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.890 109.3 45.0 -71.9 -37.8 5.2 30.5 2.9 12 113 A R H X S+ 0 0 125 -4,-2.3 4,-2.3 2,-0.2 -1,-0.2 0.838 110.9 55.2 -73.8 -30.2 1.9 30.6 4.8 13 114 A F H X S+ 0 0 53 -4,-1.5 4,-1.9 -5,-0.2 -2,-0.2 0.908 110.9 45.6 -65.7 -41.1 1.9 26.8 5.0 14 115 A A H X S+ 0 0 39 -4,-1.8 4,-2.6 2,-0.2 -2,-0.2 0.909 112.3 50.0 -68.9 -42.7 5.4 27.0 6.6 15 116 A N H X S+ 0 0 104 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.891 111.2 49.6 -63.3 -38.9 4.3 29.8 9.0 16 117 A L H X S+ 0 0 36 -4,-2.3 4,-1.8 2,-0.2 -1,-0.2 0.880 110.5 49.8 -67.7 -39.5 1.3 27.8 10.1 17 118 A I H X S+ 0 0 63 -4,-1.9 4,-2.5 1,-0.2 -2,-0.2 0.927 110.8 50.3 -65.1 -43.8 3.4 24.7 10.7 18 119 A D H X S+ 0 0 53 -4,-2.6 4,-2.7 1,-0.2 5,-0.2 0.882 107.2 54.1 -61.4 -39.8 5.8 26.7 12.7 19 120 A K H X S+ 0 0 93 -4,-2.1 4,-2.4 2,-0.2 -1,-0.2 0.916 109.9 46.7 -62.1 -42.6 3.0 28.1 14.8 20 121 A V H X S+ 0 0 10 -4,-1.8 4,-2.3 2,-0.2 5,-0.2 0.944 111.9 51.6 -64.2 -46.1 1.8 24.7 15.7 21 122 A R H X S+ 0 0 123 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.914 112.9 44.4 -55.8 -47.5 5.3 23.5 16.5 22 123 A F H X S+ 0 0 88 -4,-2.7 4,-3.1 1,-0.2 5,-0.3 0.906 111.3 52.8 -66.8 -41.6 5.9 26.4 18.8 23 124 A L H X S+ 0 0 16 -4,-2.4 4,-2.4 -5,-0.2 -1,-0.2 0.884 111.0 47.8 -62.8 -36.8 2.5 26.1 20.5 24 125 A E H X S+ 0 0 95 -4,-2.3 4,-2.4 2,-0.2 -1,-0.2 0.897 113.3 47.2 -70.7 -39.3 3.2 22.4 21.2 25 126 A Q H X S+ 0 0 98 -4,-2.1 4,-1.7 -5,-0.2 -2,-0.2 0.918 114.5 46.5 -67.0 -42.7 6.6 23.1 22.6 26 127 A Q H X S+ 0 0 104 -4,-3.1 4,-2.3 1,-0.2 -2,-0.2 0.919 112.0 52.9 -64.2 -41.4 5.3 25.9 24.7 27 128 A N H X S+ 0 0 19 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.901 106.2 51.7 -60.7 -44.4 2.5 23.6 25.8 28 129 A K H X S+ 0 0 120 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.872 111.2 47.8 -64.9 -34.7 4.8 20.8 26.9 29 130 A I H X S+ 0 0 91 -4,-1.7 4,-2.3 2,-0.2 -1,-0.2 0.903 110.6 51.1 -71.3 -39.5 6.9 23.2 29.0 30 131 A L H X S+ 0 0 16 -4,-2.3 4,-2.4 1,-0.2 5,-0.2 0.897 110.0 50.2 -63.0 -39.7 3.7 24.7 30.7 31 132 A L H X S+ 0 0 70 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.902 110.3 50.4 -63.8 -41.7 2.5 21.2 31.5 32 133 A A H X S+ 0 0 37 -4,-1.7 4,-1.3 2,-0.2 -2,-0.2 0.895 111.4 47.8 -64.2 -41.9 5.9 20.4 33.1 33 134 A E H X S+ 0 0 83 -4,-2.3 4,-1.3 2,-0.2 3,-0.4 0.916 112.0 47.7 -67.1 -43.6 5.9 23.5 35.2 34 135 A L H < S+ 0 0 48 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.882 107.0 60.5 -64.1 -34.6 2.3 23.0 36.4 35 136 A E H < S+ 0 0 163 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.850 100.6 53.0 -59.7 -37.8 3.3 19.4 37.1 36 137 A Q H < 0 0 159 -4,-1.3 -1,-0.2 -3,-0.4 -2,-0.2 0.855 360.0 360.0 -68.2 -33.2 6.0 20.7 39.6 37 138 A L < 0 0 121 -4,-1.3 -1,-0.3 -3,-0.2 -2,-0.2 0.483 360.0 360.0 -81.2 360.0 3.4 22.7 41.4 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 102 B N >> 0 0 126 0, 0.0 4,-1.9 0, 0.0 2,-1.8 0.000 360.0 360.0 360.0 120.4 -5.1 17.6 -10.9 40 103 B E T 34 + 0 0 127 1,-0.2 0, 0.0 2,-0.2 0, 0.0 -0.481 360.0 58.1 -85.9 68.4 -5.1 21.1 -9.4 41 104 B K T 34 S+ 0 0 62 -2,-1.8 -1,-0.2 0, 0.0 0, 0.0 0.150 112.0 38.2-155.0 -41.5 -8.6 21.1 -8.0 42 105 B V T <> S+ 0 0 85 -3,-0.9 4,-0.7 2,-0.2 3,-0.4 0.769 119.7 49.8 -86.3 -31.9 -8.2 18.0 -5.8 43 106 B E H X S+ 0 0 100 -4,-1.9 4,-1.9 1,-0.2 -3,-0.2 0.823 111.4 47.4 -76.1 -33.3 -4.7 19.2 -4.9 44 107 B L H 4 S+ 0 0 94 -5,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.365 112.3 50.2 -89.5 4.5 -5.9 22.7 -4.0 45 108 B Q H > S+ 0 0 102 -3,-0.4 4,-1.4 2,-0.1 -1,-0.2 0.498 108.8 54.9-109.3 -19.4 -8.8 21.3 -2.0 46 109 B E H X S+ 0 0 93 -4,-0.7 4,-2.2 2,-0.2 -2,-0.2 0.930 106.6 46.7 -78.4 -51.3 -6.3 19.0 -0.2 47 110 B L H X S+ 0 0 45 -4,-1.9 4,-3.0 1,-0.2 5,-0.2 0.870 110.3 57.4 -58.2 -35.0 -3.9 21.8 0.9 48 111 B N H > S+ 0 0 85 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.938 106.3 47.1 -59.8 -48.9 -7.1 23.6 2.0 49 112 B D H X S+ 0 0 85 -4,-1.4 4,-2.5 2,-0.2 -1,-0.2 0.865 112.9 49.6 -61.8 -37.9 -8.1 20.7 4.3 50 113 B R H X S+ 0 0 154 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.927 111.1 48.9 -68.0 -42.4 -4.5 20.6 5.7 51 114 B F H X S+ 0 0 31 -4,-3.0 4,-1.8 1,-0.2 -2,-0.2 0.905 112.0 50.3 -61.1 -41.5 -4.6 24.4 6.3 52 115 B A H X S+ 0 0 40 -4,-2.7 4,-2.0 1,-0.2 -2,-0.2 0.930 110.4 47.9 -62.7 -47.9 -8.0 23.9 8.0 53 116 B N H X S+ 0 0 96 -4,-2.5 4,-1.9 1,-0.2 -1,-0.2 0.867 110.3 52.9 -62.3 -36.5 -6.8 21.1 10.3 54 117 B L H X S+ 0 0 24 -4,-2.2 4,-2.1 1,-0.2 -1,-0.2 0.872 108.7 49.9 -66.8 -36.9 -3.7 23.1 11.2 55 118 B I H X S+ 0 0 69 -4,-1.8 4,-2.3 2,-0.2 -2,-0.2 0.874 108.3 51.5 -70.3 -37.5 -5.9 26.1 12.2 56 119 B D H X S+ 0 0 110 -4,-2.0 4,-2.4 1,-0.2 -1,-0.2 0.910 110.8 50.3 -63.0 -40.2 -8.1 23.9 14.4 57 120 B K H X S+ 0 0 94 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.897 108.9 51.6 -62.3 -43.5 -4.9 22.6 16.0 58 121 B V H X S+ 0 0 7 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.897 110.3 48.2 -61.7 -43.5 -3.8 26.2 16.6 59 122 B R H X S+ 0 0 156 -4,-2.3 4,-2.4 2,-0.2 5,-0.2 0.953 112.0 48.5 -62.3 -52.2 -7.1 27.2 18.2 60 123 B F H X S+ 0 0 121 -4,-2.4 4,-2.3 1,-0.2 -2,-0.2 0.919 115.0 44.7 -53.4 -49.9 -7.0 24.2 20.5 61 124 B L H X S+ 0 0 11 -4,-2.4 4,-2.7 2,-0.2 5,-0.2 0.847 110.6 53.1 -67.2 -36.9 -3.4 24.8 21.6 62 125 B E H X S+ 0 0 57 -4,-2.2 4,-1.9 -5,-0.2 -1,-0.2 0.925 111.6 46.8 -64.9 -42.8 -3.9 28.5 22.1 63 126 B Q H X S+ 0 0 125 -4,-2.4 4,-1.8 2,-0.2 -2,-0.2 0.905 114.3 46.8 -65.3 -42.9 -6.8 27.9 24.4 64 127 B Q H X S+ 0 0 55 -4,-2.3 4,-2.8 -5,-0.2 5,-0.2 0.939 111.3 49.8 -68.1 -43.7 -5.0 25.2 26.4 65 128 B N H X S+ 0 0 8 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.873 110.5 51.8 -62.4 -33.4 -1.8 27.2 26.8 66 129 B K H X S+ 0 0 150 -4,-1.9 4,-2.0 -5,-0.2 -1,-0.2 0.889 110.7 48.5 -68.3 -35.8 -4.0 30.1 28.0 67 130 B I H X S+ 0 0 86 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.906 112.0 48.7 -67.9 -43.2 -5.6 27.8 30.5 68 131 B L H X S+ 0 0 12 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.908 111.1 49.7 -64.5 -43.2 -2.3 26.5 31.7 69 132 B L H X S+ 0 0 92 -4,-2.4 4,-2.6 1,-0.2 -1,-0.2 0.913 110.0 51.3 -61.9 -42.8 -0.8 30.0 32.1 70 133 B A H X S+ 0 0 52 -4,-2.0 4,-2.3 1,-0.2 -1,-0.2 0.898 109.7 50.1 -62.2 -40.4 -3.9 31.1 34.1 71 134 B E H X S+ 0 0 97 -4,-2.1 4,-1.2 2,-0.2 -1,-0.2 0.917 111.3 47.8 -64.2 -43.8 -3.5 28.0 36.4 72 135 B L H < S+ 0 0 35 -4,-2.3 3,-0.3 1,-0.2 -2,-0.2 0.898 110.4 52.8 -62.8 -39.5 0.2 28.8 36.9 73 136 B E H < S+ 0 0 170 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.905 109.0 50.0 -61.8 -41.4 -0.8 32.5 37.6 74 137 B Q H < 0 0 159 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.712 360.0 360.0 -69.8 -24.3 -3.3 31.2 40.2 75 138 B L < 0 0 125 -4,-1.2 -2,-0.2 -3,-0.3 -1,-0.2 0.866 360.0 360.0 -90.7 360.0 -0.6 29.1 41.9