==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 17-OCT-00 1G25 . COMPND 2 MOLECULE: CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR V.GERVAIS,E.WASIELEWSKI,D.BUSSO,A.POTERSZMAN,J.M.EGLY, . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4448.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 47.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 10.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 133 0, 0.0 17,-0.1 0, 0.0 18,-0.1 0.000 360.0 360.0 360.0 15.1 -12.1 -2.2 -8.7 2 2 A D > + 0 0 53 12,-0.1 3,-1.6 3,-0.1 12,-0.3 0.586 360.0 152.6-128.6 -63.5 -12.6 -3.8 -5.2 3 3 A D T 3 S- 0 0 140 1,-0.3 3,-0.0 10,-0.1 0, 0.0 -0.267 84.6 -20.1 60.3-147.4 -11.4 -7.4 -4.9 4 4 A Q T 3 S- 0 0 174 1,-0.1 -1,-0.3 10,-0.0 10,-0.0 0.616 103.7-115.3 -69.1 -7.7 -10.3 -8.4 -1.4 5 5 A G < - 0 0 4 -3,-1.6 5,-0.2 5,-0.1 -1,-0.1 0.364 48.3 -49.5 82.4 137.5 -9.9 -4.7 -0.6 6 6 A C - 0 0 2 3,-0.2 4,-0.1 1,-0.1 24,-0.1 0.180 48.1-135.6 -32.4 160.5 -6.5 -3.1 0.1 7 7 A P S > S+ 0 0 31 0, 0.0 3,-1.0 0, 0.0 -1,-0.1 0.931 94.5 29.8 -88.9 -66.4 -4.3 -4.8 2.8 8 8 A R T 3 S+ 0 0 123 1,-0.3 2,-0.6 23,-0.0 26,-0.1 0.997 141.6 18.3 -60.0 -71.0 -2.9 -1.9 4.9 9 9 A C T > S- 0 0 25 22,-0.0 3,-1.0 2,-0.0 -1,-0.3 -0.262 87.1-164.8 -93.4 46.5 -5.8 0.5 4.6 10 10 A K T < + 0 0 127 -3,-1.0 -5,-0.1 -2,-0.6 -2,-0.0 -0.003 65.7 70.9 -35.5 93.8 -8.3 -2.2 3.4 11 11 A T T 3>> + 0 0 61 -9,-0.1 4,-3.2 5,-0.1 5,-0.7 0.228 64.9 86.7-176.1 -43.5 -10.9 0.2 2.1 12 12 A T H X>5S+ 0 0 1 -3,-1.0 4,-2.4 3,-0.2 3,-1.7 0.858 95.0 28.8 -47.1-109.6 -9.9 2.1 -1.1 13 13 A K H 345S+ 0 0 9 1,-0.3 -1,-0.2 2,-0.2 -10,-0.1 0.753 124.9 52.0 -26.8 -38.1 -10.7 0.3 -4.4 14 14 A Y H 345S+ 0 0 129 -12,-0.3 -1,-0.3 1,-0.1 -2,-0.2 0.971 132.4 14.9 -70.0 -45.0 -13.6 -1.5 -2.5 15 15 A R H <<5S+ 0 0 127 -4,-3.2 -2,-0.2 -3,-1.7 -3,-0.2 0.916 126.4 61.9 -88.4 -53.7 -15.0 1.9 -1.3 16 16 A N << - 0 0 85 -4,-2.4 3,-0.3 -5,-0.7 -1,-0.1 -0.618 65.5-164.9 -76.5 121.6 -13.0 4.2 -3.7 17 17 A P S S+ 0 0 76 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 -0.174 76.7 56.0 -97.8 39.6 -13.9 3.4 -7.4 18 18 A S S S+ 0 0 110 -17,-0.1 2,-0.1 2,-0.0 -5,-0.0 -0.115 84.1 78.4-164.2 56.6 -10.9 5.2 -8.9 19 19 A L - 0 0 17 -3,-0.3 2,-0.3 -18,-0.1 12,-0.0 -0.430 53.9-139.6-138.3-143.9 -7.5 4.0 -7.6 20 20 A K - 0 0 95 -2,-0.1 12,-0.6 42,-0.1 2,-0.4 -0.938 16.0-114.1 178.7 159.1 -5.0 1.1 -8.1 21 21 A L E -AB 31 61A 24 40,-1.1 40,-0.8 -2,-0.3 2,-0.5 -0.897 22.4-148.5-110.9 136.4 -2.6 -1.2 -6.2 22 22 A M E -AB 30 60A 29 8,-3.8 8,-0.9 -2,-0.4 38,-0.3 -0.859 9.6-146.7-105.9 135.3 1.2 -1.2 -6.6 23 23 A V E - B 0 59A 38 36,-2.1 36,-2.5 -2,-0.5 2,-0.2 -0.468 13.7-146.6 -91.1 167.0 3.3 -4.3 -6.2 24 24 A N > - 0 0 3 34,-0.2 3,-2.2 -2,-0.1 4,-0.2 -0.754 37.0 -73.0-128.6 176.4 6.9 -4.4 -4.7 25 25 A V T 3 S+ 0 0 77 31,-0.3 -1,-0.1 1,-0.3 32,-0.1 0.877 130.8 47.2 -33.3 -74.3 10.1 -6.3 -5.2 26 26 A C T 3 S- 0 0 52 1,-0.1 -1,-0.3 -3,-0.0 -3,-0.0 0.809 119.6-118.9 -44.8 -24.2 9.0 -9.6 -3.5 27 27 A G < + 0 0 41 -3,-2.2 -2,-0.1 0, 0.0 -1,-0.1 0.936 68.2 124.4 83.7 77.5 5.9 -9.1 -5.7 28 28 A H - 0 0 67 -4,-0.2 2,-0.2 -6,-0.1 -5,-0.1 0.298 59.3 -80.0-130.6 -98.9 2.9 -8.7 -3.4 29 29 A T - 0 0 52 -7,-0.1 2,-0.3 -6,-0.1 -6,-0.2 -0.791 28.2-178.1-179.3 134.2 0.4 -5.7 -3.4 30 30 A L E -A 22 0A 0 -8,-0.9 -8,-3.8 -2,-0.2 5,-0.2 -0.801 26.7-139.3-141.6 95.4 0.1 -2.2 -2.0 31 31 A C E >> -A 21 0A 0 -2,-0.3 4,-1.5 -10,-0.3 3,-0.9 0.121 34.0 -98.6 -44.9 172.1 -3.2 -0.4 -2.7 32 32 A E H 3> S+ 0 0 32 -12,-0.6 4,-0.7 1,-0.3 -1,-0.1 0.932 127.3 51.7 -63.9 -41.9 -3.0 3.3 -3.7 33 33 A S H 3> S+ 0 0 31 1,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.611 104.7 60.8 -71.7 -8.0 -3.8 4.3 -0.1 34 34 A C H <>>S+ 0 0 0 -3,-0.9 4,-4.2 2,-0.2 5,-0.5 0.961 94.7 54.9 -83.1 -59.1 -1.0 2.0 1.1 35 35 A V H X5S+ 0 0 33 -4,-1.5 4,-0.7 1,-0.2 5,-0.3 0.806 111.4 52.9 -43.3 -25.6 2.1 3.6 -0.6 36 36 A D H X5S+ 0 0 71 -4,-0.7 4,-1.1 2,-0.1 -1,-0.2 0.947 121.9 24.4 -79.1 -49.6 0.7 6.7 1.2 37 37 A L H X5S+ 0 0 74 -4,-1.3 4,-0.6 -3,-0.3 -2,-0.2 0.753 117.3 63.5 -87.5 -23.8 0.5 5.4 4.8 38 38 A L H <>S+ 0 0 7 -4,-4.2 5,-2.6 -5,-0.2 -3,-0.2 0.921 116.4 27.0 -66.1 -43.6 3.2 2.6 4.3 39 39 A F H >< - 0 0 7 5,-1.5 4,-0.7 -2,-0.3 -16,-0.1 -0.065 26.8-118.4 -42.7 144.0 6.0 -4.8 2.4 47 47 A P T 4 S+ 0 0 22 0, 0.0 -1,-0.2 0, 0.0 -17,-0.0 0.549 105.7 7.8 -65.3 -5.9 2.3 -4.4 3.2 48 48 A E T 4 S+ 0 0 92 3,-0.1 -2,-0.1 -41,-0.0 -18,-0.0 0.508 136.0 35.4-141.6 -57.4 2.2 -8.1 4.0 49 49 A C T 4 S- 0 0 58 1,-0.1 -3,-0.2 2,-0.0 -23,-0.0 0.301 87.5-138.2 -90.3 16.4 5.6 -10.0 4.0 50 50 A G < - 0 0 41 -4,-0.7 -1,-0.1 -5,-0.2 3,-0.0 0.739 34.7-178.4 37.4 25.4 7.3 -6.9 5.5 51 51 A T - 0 0 37 1,-0.2 2,-2.3 -6,-0.1 -5,-1.5 -0.219 40.9-103.1 -51.8 143.5 10.2 -7.8 3.1 52 52 A P - 0 0 113 0, 0.0 -7,-0.2 0, 0.0 -1,-0.2 -0.435 38.5-146.3 -70.6 77.9 13.0 -5.3 3.5 53 53 A L - 0 0 9 -2,-2.3 3,-0.5 1,-0.2 4,-0.1 -0.229 12.2-132.6 -48.3 114.5 12.2 -3.2 0.4 54 54 A R S S- 0 0 231 1,-0.2 -1,-0.2 2,-0.1 3,-0.1 0.789 88.6 -23.7 -43.3 -25.1 15.7 -2.1 -0.7 55 55 A K S S- 0 0 159 1,-0.4 -1,-0.2 2,-0.1 2,-0.2 -0.219 103.9 -64.8 170.8 88.6 14.1 1.4 -1.0 56 56 A S + 0 0 31 -3,-0.5 -1,-0.4 1,-0.1 -31,-0.3 -0.376 61.0 170.3 59.1-121.0 10.3 1.9 -1.4 57 57 A N + 0 0 51 -2,-0.2 2,-0.3 1,-0.2 -32,-0.2 0.824 2.8 162.7 79.3 102.6 9.4 0.4 -4.9 58 58 A F - 0 0 34 -34,-0.1 2,-1.0 2,-0.0 -34,-0.2 -0.765 21.4-160.8-154.1 101.4 5.7 0.1 -5.6 59 59 A R E -B 23 0A 171 -36,-2.5 -36,-2.1 -2,-0.3 2,-0.2 -0.735 18.1-164.8 -89.3 104.1 4.5 -0.4 -9.3 60 60 A V E +B 22 0A 49 -2,-1.0 2,-0.3 -38,-0.3 -38,-0.3 -0.527 22.5 136.5 -88.6 155.5 0.8 0.6 -9.3 61 61 A Q E +B 21 0A 100 -40,-0.8 -40,-1.1 -2,-0.2 -42,-0.0 -0.968 16.0 159.1-179.6 170.6 -1.7 -0.2 -12.1 62 62 A L + 0 0 73 -2,-0.3 -42,-0.1 -42,-0.2 -1,-0.0 0.194 63.6 79.2-175.4 -40.5 -5.3 -1.4 -12.8 63 63 A F - 0 0 180 2,-0.0 -2,-0.0 0, 0.0 -43,-0.0 0.974 61.9-179.3 -50.5 -63.6 -6.5 -0.4 -16.2 64 64 A E 0 0 155 1,-0.0 -3,-0.0 0, 0.0 0, 0.0 0.947 360.0 360.0 59.7 90.1 -4.6 -3.2 -18.0 65 65 A D 0 0 197 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.202 360.0 360.0-165.0 360.0 -5.5 -2.8 -21.7