==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 23-OCT-00 1G2Z . COMPND 2 MOLECULE: HEPATOCYTE NUCLEAR FACTOR 1-ALPHA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.B.ROSE,J.A.ENDRIZZI,J.D.CRONK,J.HOLTON,T.ALBER . 63 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5440.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 76.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 61.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 238 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -17.8 44.1 19.8 49.8 2 2 A V - 0 0 102 4,-0.0 2,-0.0 3,-0.0 0, 0.0 -0.884 360.0-149.8 -99.1 114.4 42.4 16.6 48.7 3 3 A S > - 0 0 58 -2,-0.6 4,-2.6 1,-0.1 5,-0.2 -0.233 28.7-106.4 -74.2 166.8 44.4 14.7 46.1 4 4 A K H > S+ 0 0 144 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.896 122.6 53.4 -58.5 -42.4 43.0 12.5 43.4 5 5 A L H > S+ 0 0 110 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.957 110.0 46.9 -58.1 -50.2 44.2 9.4 45.4 6 6 A S H > S+ 0 0 45 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.913 112.0 50.5 -58.8 -41.6 42.4 10.6 48.6 7 7 A Q H X S+ 0 0 89 -4,-2.6 4,-2.7 2,-0.2 -1,-0.2 0.935 110.4 48.5 -63.8 -42.8 39.3 11.4 46.6 8 8 A L H X S+ 0 0 29 -4,-2.5 4,-2.8 -5,-0.2 5,-0.2 0.936 110.2 53.2 -62.5 -44.3 39.3 7.9 45.0 9 9 A Q H X S+ 0 0 106 -4,-3.0 4,-2.5 1,-0.2 -1,-0.2 0.920 110.4 48.2 -55.8 -44.1 39.8 6.4 48.5 10 10 A T H X S+ 0 0 88 -4,-2.4 4,-2.3 -5,-0.2 -1,-0.2 0.927 112.9 45.4 -63.3 -48.4 36.8 8.2 49.8 11 11 A E H X S+ 0 0 64 -4,-2.7 4,-2.3 2,-0.2 -1,-0.2 0.899 112.0 52.4 -65.1 -38.1 34.5 7.3 46.9 12 12 A L H X S+ 0 0 53 -4,-2.8 4,-2.8 2,-0.2 -2,-0.2 0.944 109.7 48.4 -63.8 -45.8 35.6 3.7 47.1 13 13 A X H X S+ 0 0 85 -4,-2.5 4,-2.8 -5,-0.2 5,-0.2 0.933 110.5 51.6 -60.6 -43.2 34.9 3.4 50.8 14 14 A A H X S+ 0 0 55 -4,-2.3 4,-2.7 1,-0.2 -1,-0.2 0.935 111.9 46.3 -56.8 -45.9 31.5 5.0 50.3 15 15 A A H X S+ 0 0 9 -4,-2.3 4,-1.7 1,-0.2 -1,-0.2 0.897 111.2 53.2 -65.8 -37.6 30.6 2.5 47.5 16 16 A L H <>S+ 0 0 67 -4,-2.8 5,-2.2 2,-0.2 4,-0.3 0.921 109.8 47.6 -60.1 -47.1 31.9 -0.3 49.7 17 17 A L H ><5S+ 0 0 86 -4,-2.8 3,-1.9 1,-0.2 -2,-0.2 0.939 110.4 51.4 -62.6 -44.2 29.7 0.7 52.6 18 18 A E H 3<5S+ 0 0 124 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.833 102.9 59.9 -61.6 -30.8 26.7 1.0 50.4 19 19 A S T 3<5S- 0 0 31 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.475 129.6 -92.8 -74.8 -8.1 27.3 -2.5 48.9 20 20 A G T < 5 - 0 0 57 -3,-1.9 -3,-0.2 -4,-0.3 -2,-0.2 0.599 54.7-178.6 107.4 18.0 26.9 -3.8 52.5 21 21 A L < - 0 0 55 -5,-2.2 -1,-0.2 1,-0.1 2,-0.1 -0.254 27.7-127.2 -49.3 130.7 30.4 -3.9 53.8 22 22 A S > - 0 0 51 1,-0.1 4,-2.0 4,-0.0 5,-0.1 -0.363 9.5-120.8 -86.3 161.0 30.2 -5.4 57.4 23 23 A K H > S+ 0 0 135 1,-0.2 4,-3.7 2,-0.2 5,-0.2 0.914 114.6 59.1 -63.9 -36.5 31.5 -4.1 60.7 24 24 A E H > S+ 0 0 137 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.920 104.2 49.3 -60.0 -43.0 33.4 -7.3 61.0 25 25 A A H > S+ 0 0 33 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.927 112.0 48.6 -64.9 -37.6 35.2 -6.5 57.8 26 26 A L H X S+ 0 0 59 -4,-2.0 4,-2.0 2,-0.2 -2,-0.2 0.915 110.2 52.2 -66.3 -40.2 36.0 -3.1 59.0 27 27 A I H X S+ 0 0 82 -4,-3.7 4,-1.4 1,-0.2 -2,-0.2 0.946 109.8 48.7 -59.4 -45.8 37.2 -4.5 62.3 28 28 A Q H < S+ 0 0 141 -4,-2.8 4,-0.4 -5,-0.2 3,-0.3 0.912 108.3 53.5 -60.2 -41.5 39.5 -6.9 60.6 29 29 A A H >< S+ 0 0 59 -4,-2.1 3,-1.3 1,-0.2 -1,-0.2 0.893 104.4 55.9 -60.6 -39.4 40.9 -4.1 58.4 30 30 A L H 3< S+ 0 0 152 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.822 99.9 61.0 -60.4 -31.4 41.6 -2.1 61.5 31 31 A G T 3< 0 0 71 -4,-1.4 -1,-0.2 -3,-0.3 -2,-0.2 0.536 360.0 360.0 -75.0 -7.6 43.7 -5.0 62.8 32 32 A E < 0 0 191 -3,-1.3 -1,-0.3 -4,-0.4 -2,-0.1 0.217 360.0 360.0 -72.1 360.0 46.1 -4.7 59.9 33 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 34 2 B V >> 0 0 115 0, 0.0 4,-6.9 0, 0.0 5,-0.6 0.000 360.0 360.0 360.0 -33.6 23.8 -8.1 40.8 35 3 B S H >5 + 0 0 105 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.874 360.0 28.5 -39.5 -73.1 21.9 -5.2 42.3 36 4 B K H >5S+ 0 0 153 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.893 127.4 48.0 -59.9 -39.3 24.5 -4.5 44.9 37 5 B L H >5S+ 0 0 84 2,-0.2 4,-2.9 1,-0.2 -2,-0.2 0.929 113.1 46.1 -68.0 -45.2 27.2 -5.9 42.7 38 6 B S H X5S+ 0 0 42 -4,-6.9 4,-2.4 1,-0.2 -2,-0.2 0.934 113.5 50.1 -63.6 -41.0 26.1 -3.9 39.7 39 7 B Q H XS+ 0 0 57 -4,-2.8 5,-2.1 2,-0.2 4,-0.3 0.938 109.0 47.7 -58.9 -46.3 38.0 5.4 38.6 49 17 B L H ><5S+ 0 0 83 -4,-2.7 3,-2.1 1,-0.3 -2,-0.2 0.941 110.6 52.0 -62.0 -43.0 37.3 7.5 35.6 50 18 B E H 3<5S+ 0 0 153 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.803 102.9 58.8 -64.0 -28.5 37.1 10.6 37.7 51 19 B S T 3<5S- 0 0 33 -4,-1.6 -1,-0.3 -3,-0.2 -2,-0.2 0.507 130.1 -92.4 -77.2 -6.5 40.5 9.8 39.2 52 20 B G T < 5 + 0 0 57 -3,-2.1 -3,-0.2 -4,-0.3 -2,-0.2 0.543 55.6 178.9 108.4 13.2 42.0 9.9 35.7 53 21 B L < - 0 0 58 -5,-2.1 -1,-0.2 -6,-0.2 2,-0.1 -0.245 30.3-125.8 -49.2 126.7 41.8 6.3 34.5 54 22 B S > - 0 0 48 1,-0.1 4,-1.8 4,-0.0 3,-0.3 -0.377 10.0-120.1 -80.3 161.5 43.2 6.4 31.0 55 23 B K H > S+ 0 0 153 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.886 115.8 59.9 -61.6 -36.4 41.8 5.2 27.6 56 24 B E H > S+ 0 0 128 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.920 103.5 48.9 -60.6 -41.0 44.8 3.0 27.5 57 25 B A H > S+ 0 0 35 -3,-0.3 4,-2.5 1,-0.2 -1,-0.2 0.912 112.2 49.7 -65.0 -42.3 43.8 1.2 30.7 58 26 B L H X S+ 0 0 53 -4,-1.8 4,-2.0 2,-0.2 -2,-0.2 0.908 110.2 49.3 -61.1 -43.5 40.3 0.8 29.3 59 27 B I H X S+ 0 0 111 -4,-2.8 4,-1.3 2,-0.2 -2,-0.2 0.949 109.9 51.2 -64.6 -42.2 41.6 -0.6 26.1 60 28 B Q H >< S+ 0 0 136 -4,-2.7 3,-0.7 1,-0.2 4,-0.5 0.932 109.6 51.3 -57.5 -44.8 43.8 -3.1 27.9 61 29 B A H >< S+ 0 0 58 -4,-2.5 3,-1.0 1,-0.3 -1,-0.2 0.867 105.3 55.7 -58.4 -38.2 40.7 -4.1 29.9 62 30 B L H 3< S+ 0 0 154 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.769 103.5 55.7 -67.2 -27.7 38.7 -4.6 26.8 63 31 B G T << 0 0 71 -4,-1.3 -1,-0.2 -3,-0.7 -2,-0.2 0.512 360.0 360.0 -82.5 -8.5 41.4 -7.0 25.5 64 32 B E < 0 0 178 -3,-1.0 -2,-0.2 -4,-0.5 -1,-0.1 0.916 360.0 360.0 -86.1 360.0 41.2 -9.3 28.5