==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 17-FEB-06 2G31 . COMPND 2 MOLECULE: RETICULON-4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.F.LI,J.X.LIU,J.X.SONG . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5657.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 81.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 26.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 46.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 262 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 82.4 2.2 -6.9 -3.7 2 2 A I + 0 0 146 1,-0.1 3,-0.3 2,-0.1 0, 0.0 0.933 360.0 153.5 42.7 64.5 4.1 -6.6 -0.5 3 3 A Y + 0 0 203 1,-0.2 2,-0.8 2,-0.0 -1,-0.1 0.698 61.5 63.2 -91.5 -24.5 2.2 -9.4 1.2 4 4 A K > + 0 0 146 1,-0.2 4,-0.7 2,-0.1 3,-0.2 -0.458 60.4 133.9 -98.8 58.2 5.0 -10.3 3.5 5 5 A G T 4 + 0 0 34 -2,-0.8 -1,-0.2 -3,-0.3 -2,-0.0 -0.091 57.4 72.4 -97.2 32.7 4.9 -7.0 5.4 6 6 A V T > S+ 0 0 92 3,-0.1 4,-1.4 2,-0.1 -1,-0.2 0.716 101.7 35.4-111.1 -40.9 5.0 -8.7 8.8 7 7 A I T 4 S+ 0 0 104 -3,-0.2 4,-0.4 2,-0.2 -2,-0.1 0.724 122.6 48.0 -85.3 -25.2 8.6 -9.9 8.9 8 8 A Q T X S+ 0 0 115 -4,-0.7 4,-3.1 2,-0.2 -3,-0.1 0.872 110.8 49.6 -81.0 -41.3 9.8 -6.8 7.0 9 9 A A H > S+ 0 0 40 1,-0.2 4,-2.1 2,-0.2 5,-0.3 0.959 111.0 48.2 -61.4 -53.6 7.9 -4.4 9.2 10 10 A I H < S+ 0 0 98 -4,-1.4 4,-0.3 1,-0.2 -1,-0.2 0.760 113.6 52.7 -58.1 -24.6 9.2 -5.9 12.4 11 11 A Q H >> S+ 0 0 97 -4,-0.4 4,-2.2 2,-0.2 3,-1.2 0.961 104.4 51.1 -75.1 -55.9 12.6 -5.7 10.7 12 12 A K H >X S+ 0 0 132 -4,-3.1 4,-3.0 1,-0.3 3,-1.3 0.938 110.6 48.6 -44.8 -61.6 12.5 -2.0 9.8 13 13 A S H 3X S+ 0 0 32 -4,-2.1 4,-0.6 1,-0.3 7,-0.3 0.751 114.4 49.2 -51.7 -24.6 11.6 -1.1 13.3 14 14 A D H <4 S+ 0 0 127 -3,-1.2 -1,-0.3 -4,-0.3 -2,-0.3 0.742 121.3 34.2 -85.7 -27.1 14.5 -3.3 14.2 15 15 A E H << S+ 0 0 161 -4,-2.2 -2,-0.2 -3,-1.3 -3,-0.2 0.925 114.6 52.5 -89.8 -62.2 16.7 -1.6 11.7 16 16 A G H < S- 0 0 49 -4,-3.0 -3,-0.2 1,-0.2 -2,-0.1 0.901 126.9 -47.4 -37.6 -66.7 15.6 2.0 11.7 17 17 A H >< - 0 0 102 -4,-0.6 3,-0.6 -5,-0.3 -1,-0.2 -0.961 36.4-121.7-169.9 158.0 16.0 2.3 15.5 18 18 A P T > S+ 0 0 92 0, 0.0 3,-3.1 0, 0.0 4,-0.4 0.838 105.6 71.8 -75.1 -35.4 15.1 0.5 18.7 19 19 A F T 3> S+ 0 0 161 1,-0.3 4,-0.7 2,-0.2 3,-0.1 0.706 81.9 76.3 -52.3 -20.3 13.2 3.5 20.0 20 20 A R H X> S+ 0 0 112 -3,-0.6 4,-3.9 -7,-0.3 3,-0.7 0.807 79.5 72.7 -61.3 -30.4 10.7 2.5 17.4 21 21 A A H <> S+ 0 0 61 -3,-3.1 4,-3.5 1,-0.3 5,-0.2 0.959 94.0 48.2 -46.7 -70.3 9.6 -0.3 19.8 22 22 A Y H 3> S+ 0 0 205 -4,-0.4 4,-0.9 1,-0.2 -1,-0.3 0.741 117.3 48.0 -43.6 -26.1 7.9 2.0 22.2 23 23 A L H XX S+ 0 0 110 -3,-0.7 4,-0.9 -4,-0.7 3,-0.5 0.949 111.5 44.3 -80.5 -56.5 6.3 3.4 19.1 24 24 A E H 3X S+ 0 0 66 -4,-3.9 4,-3.2 1,-0.2 5,-0.3 0.780 104.5 70.1 -58.3 -27.7 5.3 0.1 17.5 25 25 A S H 3X S+ 0 0 66 -4,-3.5 4,-3.0 -5,-0.3 -1,-0.2 0.952 97.7 46.2 -54.2 -55.7 4.0 -0.9 20.9 26 26 A E H X S+ 0 0 93 -4,-3.0 3,-0.7 -5,-0.3 4,-0.5 0.803 103.3 52.0 -71.8 -30.5 -1.4 -2.4 21.5 30 30 A S H >X S+ 0 0 31 -4,-0.7 4,-1.3 -5,-0.2 3,-0.9 0.811 91.9 74.0 -74.1 -31.8 -4.1 -1.1 19.2 31 31 A E H 3< S+ 0 0 147 -4,-0.9 4,-0.3 1,-0.3 -1,-0.2 0.757 94.0 56.3 -52.1 -25.6 -4.2 -4.4 17.3 32 32 A E H X> S+ 0 0 121 -3,-0.7 3,-2.0 -4,-0.4 4,-1.4 0.868 95.3 62.7 -74.6 -39.0 -6.0 -5.7 20.3 33 33 A L H XX S+ 0 0 45 -3,-0.9 4,-1.4 -4,-0.5 3,-0.6 0.888 98.0 57.1 -52.1 -42.7 -8.7 -3.1 20.1 34 34 A V H 3< S+ 0 0 42 -4,-1.3 -1,-0.3 1,-0.3 4,-0.3 0.733 107.1 50.4 -60.9 -22.0 -9.6 -4.7 16.8 35 35 A Q H X> S+ 0 0 143 -3,-2.0 3,-0.7 -4,-0.3 4,-0.6 0.739 103.0 57.6 -86.1 -27.1 -10.0 -7.8 18.8 36 36 A K H <>S+ 0 0 16 -4,-3.3 3,-2.7 1,-0.2 5,-1.9 0.783 89.7 77.3 -80.1 -30.0 -17.7 -5.0 21.8 41 41 A A G ><5 + 0 0 41 -4,-2.9 3,-1.8 1,-0.3 -1,-0.2 0.731 67.4 94.4 -51.2 -21.6 -19.9 -5.9 18.8 42 42 A L G 3 5S+ 0 0 149 -3,-0.5 -1,-0.3 1,-0.3 -2,-0.1 0.798 109.1 9.5 -40.4 -33.5 -22.2 -7.2 21.5 43 43 A G G < 5S- 0 0 50 -3,-2.7 -1,-0.3 -4,-0.0 -2,-0.2 -0.375 117.7 -85.3-149.0 61.6 -23.7 -3.7 21.1 44 44 A H T < 5S+ 0 0 122 -3,-1.8 -3,-0.2 1,-0.2 4,-0.2 0.810 91.3 132.3 37.1 38.3 -22.2 -2.0 18.1 45 45 A V >>< + 0 0 52 -5,-1.9 4,-2.9 2,-0.2 3,-0.6 0.719 53.7 71.6 -86.5 -25.1 -19.5 -1.0 20.5 46 46 A N H 3> S+ 0 0 2 -9,-0.4 4,-4.0 1,-0.3 13,-0.7 0.887 98.1 49.0 -56.4 -41.1 -16.8 -2.1 18.1 47 47 A C H 3> S+ 0 0 24 11,-0.3 4,-0.9 1,-0.2 -1,-0.3 0.714 112.5 50.8 -70.6 -20.6 -17.6 0.9 16.0 48 48 A T H <4 S+ 0 0 75 -3,-0.6 -2,-0.3 -4,-0.2 -1,-0.2 0.838 119.5 33.2 -83.5 -37.6 -17.3 2.8 19.3 49 49 A I H >X S+ 0 0 25 -4,-2.9 4,-3.1 2,-0.2 3,-1.5 0.893 117.8 53.0 -83.3 -46.0 -14.0 1.4 20.2 50 50 A K H 3X>S+ 0 0 2 -4,-4.0 5,-3.1 1,-0.3 4,-1.5 0.906 106.2 54.3 -54.8 -44.7 -12.6 1.1 16.7 51 51 A E H 3<5S+ 0 0 92 -4,-0.9 -1,-0.3 -5,-0.3 -2,-0.2 0.681 113.9 43.9 -63.2 -17.4 -13.5 4.8 16.2 52 52 A L H <45S+ 0 0 137 -3,-1.5 -2,-0.3 -4,-0.1 -1,-0.2 0.813 126.3 29.2 -93.8 -39.6 -11.4 5.4 19.2 53 53 A R H <5S+ 0 0 84 -4,-3.1 -3,-0.2 -23,-0.1 -2,-0.2 0.961 142.1 14.0 -83.0 -68.0 -8.5 3.1 18.3 54 54 A R T <5S- 0 0 116 -4,-1.5 -3,-0.2 -5,-0.1 -4,-0.1 0.948 82.6-151.1 -73.7 -52.2 -8.5 3.1 14.6 55 55 A L S - 0 0 35 -7,-0.3 3,-1.4 2,-0.1 -6,-0.1 0.871 64.9-178.1 -40.9 -47.3 -12.4 0.9 11.1 58 58 A V T 3 S- 0 0 73 1,-0.3 2,-2.3 -11,-0.2 -11,-0.3 0.924 77.7 -38.0 39.8 73.6 -15.7 1.7 12.7 59 59 A D T 3 0 0 37 -13,-0.7 -1,-0.3 1,-0.2 -2,-0.1 -0.314 360.0 360.0 78.9 -55.1 -16.6 -1.9 13.4 60 60 A D < 0 0 150 -2,-2.3 -1,-0.2 -3,-1.4 -4,-0.0 -0.023 360.0 360.0-161.2 360.0 -15.1 -2.8 10.0