==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/DNA 26-OCT-00 1G4D . COMPND 2 MOLECULE: REPRESSOR PROTEIN C; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE MU; . AUTHOR J.M.WOJCIAK,J.IWAHARA,R.T.CLUBB . 69 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4682.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 60.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 8.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A K 0 0 247 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.4 15.2 1.2 -1.6 2 14 A S - 0 0 35 2,-0.0 2,-0.3 48,-0.0 47,-0.0 -0.968 360.0-141.2-160.7 173.5 11.9 -0.7 -1.1 3 15 A I - 0 0 44 -2,-0.3 48,-0.5 2,-0.0 47,-0.3 -0.945 9.8-164.2-142.2 162.5 8.7 -0.6 1.0 4 16 A W - 0 0 51 -2,-0.3 2,-0.3 45,-0.2 45,-0.2 -0.990 5.8-178.3-147.5 154.1 6.5 -3.2 2.6 5 17 A C B -A 48 0A 8 43,-1.2 43,-2.1 -2,-0.3 30,-0.1 -0.994 32.4-102.4-151.5 158.3 2.9 -3.4 4.0 6 18 A S >> - 0 0 41 -2,-0.3 3,-2.6 41,-0.2 4,-1.5 -0.588 41.5-109.8 -81.4 144.4 0.5 -5.8 5.8 7 19 A P H 3> S+ 0 0 13 0, 0.0 4,-3.7 0, 0.0 5,-0.5 0.852 118.8 62.0 -39.7 -44.6 -2.3 -7.2 3.5 8 20 A Q H 3> S+ 0 0 113 1,-0.2 4,-0.7 2,-0.2 12,-0.0 0.854 104.4 48.5 -56.4 -31.4 -4.8 -5.1 5.4 9 21 A E H <4 S+ 0 0 82 -3,-2.6 -1,-0.2 2,-0.2 4,-0.1 0.912 120.3 36.1 -76.3 -40.5 -3.0 -2.0 4.2 10 22 A I H >< S+ 0 0 0 -4,-1.5 3,-3.9 2,-0.2 -2,-0.2 0.962 113.0 54.8 -76.3 -54.0 -2.9 -3.2 0.6 11 23 A M H 3< S+ 0 0 37 -4,-3.7 -1,-0.2 1,-0.3 -3,-0.2 0.827 106.6 56.6 -50.5 -27.3 -6.3 -4.9 0.5 12 24 A A T 3< S+ 0 0 46 -4,-0.7 -1,-0.3 -5,-0.5 -2,-0.2 0.581 90.2 96.0 -81.3 -8.1 -7.7 -1.6 1.6 13 25 A A S X S- 0 0 4 -3,-3.9 3,-1.3 1,-0.1 48,-0.2 -0.515 87.6-100.7 -81.6 152.2 -6.1 0.2 -1.4 14 26 A D T 3 S+ 0 0 124 46,-0.4 -1,-0.1 1,-0.2 46,-0.1 -0.267 108.7 32.2 -65.0 158.5 -8.2 0.8 -4.5 15 27 A G T 3 S+ 0 0 47 1,-0.3 -1,-0.2 2,-0.1 42,-0.1 0.278 97.7 112.4 78.5 -17.5 -7.7 -1.6 -7.4 16 28 A M S < S- 0 0 15 -3,-1.3 -1,-0.3 -6,-0.2 7,-0.1 -0.627 83.9-107.5 -89.5 150.3 -7.0 -4.3 -4.8 17 29 A P - 0 0 66 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.894 42.0-126.8 -36.8 -65.7 -9.4 -7.3 -4.3 18 30 A G S S+ 0 0 44 1,-0.4 2,-0.3 -4,-0.1 3,-0.1 0.532 75.8 85.9 120.2 18.0 -10.8 -6.0 -0.9 19 31 A S S > S- 0 0 54 1,-0.1 4,-2.0 -12,-0.1 -1,-0.4 -0.999 79.4-122.6-145.9 145.6 -10.2 -9.2 1.2 20 32 A V H > S+ 0 0 68 -2,-0.3 4,-1.5 1,-0.2 3,-0.2 0.952 118.8 42.3 -54.5 -48.0 -7.2 -10.5 3.2 21 33 A A H > S+ 0 0 72 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.917 105.4 64.7 -66.5 -38.8 -7.2 -13.7 1.1 22 34 A G H > S+ 0 0 12 1,-0.2 4,-1.3 2,-0.2 5,-0.3 0.922 101.3 51.4 -50.3 -43.0 -7.9 -11.7 -2.1 23 35 A V H X S+ 0 0 0 -4,-2.0 4,-2.7 1,-0.2 -1,-0.2 0.973 105.0 53.8 -60.4 -51.4 -4.4 -10.2 -1.6 24 36 A H H X S+ 0 0 70 -4,-1.5 4,-2.2 2,-0.2 5,-0.4 0.844 102.3 65.1 -53.1 -28.7 -2.8 -13.6 -1.2 25 37 A Y H X S+ 0 0 168 -4,-1.9 4,-2.4 -3,-0.2 3,-0.3 0.992 110.5 29.8 -57.5 -73.7 -4.5 -14.4 -4.6 26 38 A R H X>S+ 0 0 61 -4,-1.3 4,-4.4 1,-0.2 5,-0.7 0.876 114.6 68.3 -54.7 -36.5 -2.6 -11.9 -6.8 27 39 A A H X>S+ 0 0 5 -4,-2.7 5,-2.1 -5,-0.3 4,-1.8 0.955 110.6 29.3 -50.7 -57.6 0.4 -12.3 -4.4 28 40 A N H <5S+ 0 0 113 -4,-2.2 -1,-0.2 -3,-0.3 -2,-0.2 0.883 125.2 48.7 -73.5 -36.4 1.2 -15.9 -5.4 29 41 A V H <5S+ 0 0 107 -4,-2.4 -2,-0.2 -5,-0.4 -3,-0.2 0.928 122.2 32.9 -70.4 -42.0 -0.2 -15.5 -8.9 30 42 A Q H <5S- 0 0 83 -4,-4.4 -3,-0.2 -5,-0.3 -2,-0.2 0.754 108.6-123.7 -85.4 -23.3 1.8 -12.2 -9.6 31 43 A G T << - 0 0 54 -4,-1.8 -3,-0.2 -5,-0.7 -4,-0.1 0.935 33.4-165.2 82.4 49.6 4.7 -13.3 -7.4 32 44 A W < - 0 0 17 -5,-2.1 -1,-0.1 -6,-0.3 18,-0.1 -0.408 22.6-115.8 -66.6 143.3 4.8 -10.4 -5.0 33 45 A T - 0 0 73 16,-0.3 16,-2.0 -2,-0.1 2,-0.4 -0.431 36.5-156.5 -73.9 154.5 8.0 -10.1 -3.0 34 46 A K E -B 48 0A 130 14,-0.2 2,-0.7 -2,-0.1 14,-0.2 -0.969 20.0-152.3-143.5 133.6 7.4 -10.5 0.8 35 47 A R E -B 47 0A 130 12,-1.2 12,-2.7 -2,-0.4 2,-0.5 -0.854 28.2-134.5 -98.4 112.1 9.2 -9.5 4.0 36 48 A K E -B 46 0A 137 -2,-0.7 10,-0.3 10,-0.3 9,-0.1 -0.540 19.8-145.5 -71.1 118.7 8.3 -12.1 6.7 37 49 A K - 0 0 47 8,-1.6 -1,-0.0 -2,-0.5 8,-0.0 -0.343 19.7-179.8 -77.9 165.3 7.4 -10.2 9.9 38 50 A E + 0 0 142 6,-0.1 5,-0.2 -2,-0.0 -1,-0.1 0.577 68.7 69.2-131.3 -54.7 8.3 -11.7 13.3 39 51 A G S S+ 0 0 90 4,-0.1 2,-0.4 6,-0.0 -2,-0.0 0.703 88.0 89.6 -46.3 -16.4 7.2 -9.4 16.2 40 52 A V S > S- 0 0 66 5,-0.1 3,-1.4 1,-0.1 5,-0.2 -0.682 90.5-107.4 -88.1 137.3 3.6 -10.4 15.1 41 53 A K T 3> S+ 0 0 188 -2,-0.4 2,-1.4 1,-0.2 4,-0.6 0.036 104.1 31.2 -50.1 169.8 2.1 -13.6 16.7 42 54 A G T 34 S- 0 0 72 1,-0.2 -1,-0.2 2,-0.1 -2,-0.0 0.143 93.1-131.3 66.6 -30.4 1.8 -16.7 14.5 43 55 A G T <4 S+ 0 0 41 -3,-1.4 -1,-0.2 -2,-1.4 -2,-0.1 0.434 88.4 105.2 65.1 -10.0 4.9 -15.5 12.7 44 56 A K T 4 + 0 0 182 -3,-0.3 2,-0.2 -8,-0.1 -1,-0.2 0.718 48.3 109.6 -73.4 -18.2 2.8 -16.2 9.6 45 57 A A < + 0 0 26 -4,-0.6 -8,-1.6 -5,-0.2 2,-0.4 -0.396 44.8 168.1 -61.2 124.2 2.4 -12.5 9.2 46 58 A V E - B 0 36A 24 -10,-0.3 -10,-0.3 -2,-0.2 2,-0.2 -1.000 25.1-140.0-139.5 138.9 4.3 -11.3 6.1 47 59 A E E - B 0 35A 47 -12,-2.7 -12,-1.2 -2,-0.4 2,-0.3 -0.519 17.0-131.9 -92.8 166.1 4.2 -7.9 4.3 48 60 A Y E -AB 5 34A 16 -43,-2.1 -43,-1.2 -14,-0.2 2,-0.9 -0.880 24.2-105.7-118.2 150.6 4.3 -7.5 0.5 49 61 A D >> - 0 0 19 -16,-2.0 3,-2.5 -2,-0.3 4,-0.7 -0.605 24.1-165.8 -77.4 106.9 6.5 -5.2 -1.5 50 62 A V G >4 S+ 0 0 0 -2,-0.9 3,-0.7 -47,-0.3 -1,-0.2 0.823 90.9 64.5 -61.2 -26.3 4.3 -2.4 -2.7 51 63 A M G 34 S+ 0 0 73 -48,-0.5 -1,-0.3 1,-0.2 -2,-0.1 0.561 102.1 50.4 -74.5 -2.5 7.1 -1.5 -5.1 52 64 A S G <4 S+ 0 0 40 -3,-2.5 -1,-0.2 -19,-0.1 -2,-0.2 0.545 88.5 99.4-108.2 -12.5 6.4 -4.9 -6.7 53 65 A M S << S- 0 0 3 -3,-0.7 5,-0.3 -4,-0.7 -26,-0.0 -0.410 96.1 -69.3 -72.8 153.8 2.7 -4.5 -7.1 54 66 A P > - 0 0 41 0, 0.0 4,-3.1 0, 0.0 5,-0.2 -0.016 49.3-114.3 -39.3 137.0 1.3 -3.4 -10.6 55 67 A T H > S+ 0 0 97 1,-0.2 4,-1.7 2,-0.2 -2,-0.1 0.936 120.1 48.1 -43.8 -54.3 2.4 0.2 -11.4 56 68 A K H > S+ 0 0 176 1,-0.2 4,-1.4 2,-0.2 3,-0.4 0.952 112.0 49.7 -53.2 -49.8 -1.3 1.2 -11.3 57 69 A E H > S+ 0 0 9 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.918 102.0 62.3 -58.0 -42.3 -1.8 -0.7 -8.0 58 70 A R H X S+ 0 0 78 -4,-3.1 4,-4.3 -5,-0.3 5,-0.4 0.931 102.0 51.4 -50.5 -45.6 1.3 1.1 -6.5 59 71 A E H X S+ 0 0 111 -4,-1.7 4,-2.5 -3,-0.4 5,-0.3 0.910 108.6 51.1 -60.9 -38.7 -0.5 4.4 -7.0 60 72 A Q H X S+ 0 0 69 -4,-1.4 4,-2.8 -3,-0.2 -46,-0.4 0.951 118.7 37.6 -64.0 -44.8 -3.5 3.0 -5.2 61 73 A V H X S+ 0 0 0 -4,-2.7 4,-4.5 2,-0.2 5,-0.4 0.975 117.9 47.8 -71.3 -54.4 -1.3 1.8 -2.3 62 74 A I H X>S+ 0 0 24 -4,-4.3 4,-2.8 -5,-0.3 5,-2.5 0.913 119.0 43.3 -54.5 -38.5 1.1 4.8 -2.3 63 75 A A H <5S+ 0 0 69 -4,-2.5 -1,-0.2 -5,-0.4 -2,-0.2 0.934 114.8 47.7 -74.2 -41.9 -2.0 7.0 -2.4 64 76 A H H <5S+ 0 0 85 -4,-2.8 -2,-0.2 -5,-0.3 -3,-0.2 0.929 118.8 42.3 -63.0 -38.4 -3.9 4.9 0.2 65 77 A L H <5S- 0 0 50 -4,-4.5 -2,-0.2 -5,-0.2 -1,-0.2 0.888 107.9-134.5 -73.2 -37.6 -0.6 5.1 2.2 66 78 A G T <5 + 0 0 60 -4,-2.8 -3,-0.2 -5,-0.4 -4,-0.1 0.868 64.6 122.6 85.7 38.8 -0.3 8.8 1.3 67 79 A L < + 0 0 80 -5,-2.5 -4,-0.1 -6,-0.2 -5,-0.1 0.821 18.5 129.9 -95.5 -85.3 3.4 8.6 0.4 68 80 A S 0 0 88 -9,-0.0 -5,-0.0 0, 0.0 -9,-0.0 -0.256 360.0 360.0 61.5-152.2 4.2 9.8 -3.1 69 81 A T 0 0 198 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.014 360.0 360.0 -47.9 360.0 7.1 12.3 -3.4