==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 21-FEB-06 2G4A . COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.HUANG,J.WU,Y.SHI . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8238.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 79 73.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 64 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E > 0 0 168 0, 0.0 4,-0.9 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 116.8 -15.2 11.6 -1.1 2 2 A Q H > + 0 0 62 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.806 360.0 63.6 -76.3 -31.9 -13.0 9.2 0.6 3 3 A L H > S+ 0 0 55 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.863 100.0 54.8 -59.4 -37.7 -11.8 7.7 -2.6 4 4 A K H > S+ 0 0 124 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.884 104.3 52.6 -63.1 -41.6 -10.3 11.0 -3.6 5 5 A H H X S+ 0 0 85 -4,-0.9 4,-1.3 1,-0.2 -1,-0.2 0.875 106.0 54.4 -61.9 -40.3 -8.3 11.2 -0.4 6 6 A C H X S+ 0 0 8 -4,-1.7 4,-1.6 1,-0.2 -1,-0.2 0.870 102.5 57.2 -63.1 -37.9 -6.9 7.8 -1.0 7 7 A N H X S+ 0 0 70 -4,-1.6 4,-1.8 1,-0.2 -1,-0.2 0.855 102.1 56.4 -61.8 -35.8 -5.7 8.8 -4.4 8 8 A V H X S+ 0 0 92 -4,-1.3 4,-1.4 1,-0.2 -1,-0.2 0.882 105.0 51.1 -64.0 -39.4 -3.7 11.6 -2.8 9 9 A I H X S+ 0 0 25 -4,-1.3 4,-1.5 1,-0.2 -1,-0.2 0.862 107.6 53.5 -66.2 -36.4 -1.8 9.1 -0.6 10 10 A L H X S+ 0 0 19 -4,-1.6 4,-1.7 1,-0.2 -1,-0.2 0.889 104.8 54.1 -65.4 -40.7 -0.9 7.0 -3.6 11 11 A K H X S+ 0 0 144 -4,-1.8 4,-1.4 1,-0.2 -1,-0.2 0.858 106.4 52.6 -60.8 -38.3 0.6 9.9 -5.4 12 12 A E H X S+ 0 0 77 -4,-1.4 4,-0.9 2,-0.2 6,-0.9 0.868 107.0 52.0 -66.6 -38.3 2.8 10.6 -2.4 13 13 A L H < S+ 0 0 27 -4,-1.5 9,-0.2 1,-0.2 -1,-0.2 0.843 118.8 36.4 -67.2 -34.5 4.1 7.1 -2.4 14 14 A L H < S+ 0 0 68 -4,-1.7 -1,-0.2 -5,-0.1 -2,-0.2 0.588 105.2 75.6 -92.4 -14.6 4.9 7.2 -6.0 15 15 A S H < S- 0 0 67 -4,-1.4 -2,-0.2 -5,-0.2 -3,-0.1 0.991 110.6 -86.0 -60.3 -81.5 6.1 10.8 -5.9 16 16 A K S >X S+ 0 0 152 -4,-0.9 3,-1.4 -5,-0.0 4,-0.6 0.326 108.2 73.6-162.7 -43.5 9.5 10.6 -4.2 17 17 A K T 34 S+ 0 0 143 1,-0.3 -4,-0.1 -5,-0.2 3,-0.1 0.828 118.3 23.3 -50.1 -39.7 9.5 10.7 -0.5 18 18 A H T 3> S+ 0 0 37 -6,-0.9 4,-0.6 1,-0.1 3,-0.5 0.110 93.7 104.5-116.7 17.3 8.3 7.2 -0.3 19 19 A A H X> + 0 0 31 -3,-1.4 4,-2.4 1,-0.2 3,-0.7 0.858 69.3 68.4 -68.3 -34.7 9.5 6.1 -3.7 20 20 A A H 3< S+ 0 0 45 -4,-0.6 -1,-0.2 1,-0.3 -2,-0.1 0.856 111.0 33.6 -52.0 -38.7 12.4 4.2 -2.2 21 21 A Y H 3> S+ 0 0 53 -3,-0.5 4,-1.0 2,-0.1 -1,-0.3 0.509 113.5 64.8 -94.9 -7.2 9.9 1.7 -0.7 22 22 A A H > + 0 0 94 -2,-0.5 4,-3.5 1,-0.2 5,-0.7 -0.523 15.1 170.9 -76.2 83.3 5.7 -14.0 -10.6 31 31 A A I 4>S+ 0 0 21 -2,-2.1 5,-1.3 1,-0.2 -1,-0.2 0.813 78.9 52.8 -62.4 -30.1 6.2 -17.3 -9.0 32 32 A S I 45S+ 0 0 129 3,-0.2 -1,-0.2 -3,-0.2 -2,-0.1 0.878 118.4 33.9 -72.5 -40.7 5.2 -19.0 -12.2 33 33 A A I 45S+ 0 0 79 3,-0.1 -2,-0.2 1,-0.0 -1,-0.1 0.947 130.2 31.7 -80.0 -54.1 7.7 -17.1 -14.2 34 34 A L I <5S- 0 0 129 -4,-3.5 -3,-0.2 2,-0.1 -2,-0.1 0.986 109.9-110.0 -67.6 -62.7 10.5 -16.8 -11.7 35 35 A G I < + 0 0 54 -5,-0.7 2,-0.4 -4,-0.1 -3,-0.2 0.649 58.3 144.6 127.2 66.1 10.1 -19.8 -9.9 36 36 A L >< + 0 0 57 -5,-1.3 4,-0.9 1,-0.1 3,-0.1 -0.761 4.9 162.1-131.5 87.3 8.9 -19.6 -6.4 37 37 A H H > S+ 0 0 151 -2,-0.4 4,-1.4 1,-0.2 3,-0.3 0.840 78.0 55.7 -71.8 -35.1 6.7 -22.4 -5.5 38 38 A D H > S+ 0 0 102 1,-0.2 4,-2.4 2,-0.2 5,-0.4 0.758 98.6 63.5 -67.5 -27.0 7.0 -21.9 -1.9 39 39 A Y H >>S+ 0 0 31 1,-0.2 4,-1.5 2,-0.2 5,-1.1 0.873 107.4 41.9 -66.6 -36.7 5.8 -18.4 -2.3 40 40 A H H <5S+ 0 0 97 -4,-0.9 -1,-0.2 -3,-0.3 -2,-0.2 0.753 114.1 53.2 -81.1 -25.3 2.4 -19.6 -3.5 41 41 A D H <5S+ 0 0 123 -4,-1.4 -2,-0.2 2,-0.1 -3,-0.2 0.915 119.4 30.7 -75.3 -45.6 2.3 -22.4 -0.9 42 42 A I H <5S+ 0 0 96 -4,-2.4 -3,-0.2 -5,-0.1 -2,-0.2 0.956 136.9 23.7 -77.8 -55.8 2.9 -20.2 2.1 43 43 A I T <5 + 0 0 18 -4,-1.5 -3,-0.2 -5,-0.4 -2,-0.1 0.988 70.0 176.6 -73.2 -65.6 1.3 -17.0 0.9 44 44 A K S - 0 0 16 -2,-0.4 4,-1.5 1,-0.1 3,-0.4 -0.907 43.1-110.8-138.0 165.6 1.6 -6.1 -5.1 49 49 A L H > S+ 0 0 32 -24,-2.2 4,-2.0 -2,-0.3 -23,-0.2 0.840 114.3 63.1 -63.6 -34.9 1.3 -2.3 -5.6 50 50 A S H > S+ 0 0 51 -24,-1.6 4,-1.2 -25,-0.3 -1,-0.2 0.867 104.3 46.8 -58.7 -38.2 1.0 -2.8 -9.3 51 51 A T H > S+ 0 0 52 -3,-0.4 4,-1.4 -25,-0.2 -1,-0.2 0.853 107.9 56.0 -72.8 -35.4 -2.2 -4.8 -8.7 52 52 A V H X S+ 0 0 10 -4,-1.5 4,-2.0 1,-0.2 -2,-0.2 0.855 103.2 55.9 -64.4 -36.1 -3.6 -2.2 -6.3 53 53 A K H X S+ 0 0 81 -4,-2.0 4,-2.0 1,-0.2 -1,-0.2 0.889 104.5 52.1 -63.4 -40.9 -3.1 0.5 -9.0 54 54 A R H X S+ 0 0 173 -4,-1.2 4,-1.2 1,-0.2 -1,-0.2 0.842 107.2 53.3 -64.6 -33.9 -5.2 -1.4 -11.4 55 55 A K H X>S+ 0 0 48 -4,-1.4 5,-3.7 2,-0.2 4,-0.5 0.919 109.5 46.8 -67.2 -45.4 -8.0 -1.7 -8.9 56 56 A M H <5S+ 0 0 25 -4,-2.0 3,-0.3 3,-0.2 -2,-0.2 0.844 111.1 53.0 -65.5 -34.6 -8.1 2.0 -8.2 57 57 A E H <5S+ 0 0 143 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.781 116.2 38.7 -70.5 -28.5 -8.1 2.7 -11.9 58 58 A N H <5S- 0 0 135 -4,-1.2 -1,-0.2 -3,-0.2 -2,-0.2 0.389 112.8-119.3 -99.5 -0.8 -11.0 0.4 -12.4 59 59 A R T ><5 + 0 0 162 -4,-0.5 3,-0.7 -3,-0.3 -3,-0.2 0.865 62.1 149.4 63.9 37.6 -12.7 1.6 -9.2 60 60 A D T 3 < + 0 0 89 -5,-3.7 2,-0.2 1,-0.2 -4,-0.2 0.779 63.2 58.8 -69.9 -28.7 -12.6 -1.9 -7.8 61 61 A Y T 3 + 0 0 8 -6,-0.4 2,-6.8 1,-0.1 6,-0.3 -0.225 61.9 176.1 -97.8 42.4 -12.3 -0.5 -4.3 62 62 A R < + 0 0 188 -3,-0.7 2,-0.3 -2,-0.2 -1,-0.1 0.199 66.3 46.0 -36.2 27.2 -15.3 1.5 -3.8 63 63 A D S > S- 0 0 89 -2,-6.8 4,-1.1 1,-0.1 5,-0.1 -0.962 75.0-127.1-169.0 155.4 -14.2 2.1 -0.3 64 64 A A H > S+ 0 0 11 -2,-0.3 4,-2.7 1,-0.2 5,-0.2 0.831 107.5 61.8 -76.0 -34.1 -11.4 3.1 1.9 65 65 A Q H > S+ 0 0 136 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.859 103.5 50.7 -59.8 -37.0 -11.8 0.0 4.2 66 66 A E H > S+ 0 0 99 2,-0.2 4,-1.5 -5,-0.2 -1,-0.2 0.877 110.6 48.0 -68.4 -39.8 -11.2 -2.2 1.2 67 67 A F H X S+ 0 0 14 -4,-1.1 4,-1.7 -6,-0.3 -2,-0.2 0.912 111.7 49.4 -67.6 -44.3 -8.0 -0.4 0.3 68 68 A A H X S+ 0 0 13 -4,-2.7 4,-2.1 1,-0.2 -2,-0.2 0.869 108.7 53.7 -63.1 -37.6 -6.7 -0.5 3.8 69 69 A A H X S+ 0 0 60 -4,-1.8 4,-1.4 -5,-0.2 -1,-0.2 0.861 107.4 50.9 -65.9 -36.2 -7.4 -4.2 4.1 70 70 A D H X S+ 0 0 31 -4,-1.5 4,-1.6 2,-0.2 -1,-0.2 0.857 110.2 49.5 -69.5 -36.3 -5.4 -4.9 1.0 71 71 A V H X S+ 0 0 21 -4,-1.7 4,-2.1 1,-0.2 -2,-0.2 0.899 108.4 52.5 -69.7 -41.6 -2.4 -3.0 2.2 72 72 A R H X S+ 0 0 178 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.841 107.7 52.5 -61.9 -35.3 -2.5 -4.7 5.6 73 73 A L H X S+ 0 0 66 -4,-1.4 4,-2.1 2,-0.2 -1,-0.2 0.900 108.3 49.7 -68.0 -42.5 -2.5 -8.1 3.8 74 74 A M H X S+ 0 0 25 -4,-1.6 4,-1.6 2,-0.2 -2,-0.2 0.887 112.8 47.1 -63.7 -40.5 0.5 -7.2 1.7 75 75 A F H X S+ 0 0 24 -4,-2.1 4,-1.6 1,-0.2 -1,-0.2 0.881 113.4 48.3 -69.5 -38.8 2.5 -6.0 4.8 76 76 A S H X S+ 0 0 67 -4,-2.1 4,-2.3 -5,-0.2 -2,-0.2 0.827 107.1 56.8 -71.3 -31.4 1.6 -9.1 6.7 77 77 A N H X S+ 0 0 25 -4,-2.1 4,-2.1 2,-0.2 -1,-0.2 0.909 107.1 47.6 -65.5 -44.4 2.5 -11.4 3.9 78 78 A C H X S+ 0 0 30 -4,-1.6 4,-2.7 2,-0.2 -1,-0.2 0.876 112.2 50.3 -65.2 -38.9 6.1 -10.0 3.7 79 79 A Y H < S+ 0 0 89 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.927 113.7 44.5 -65.8 -45.2 6.4 -10.3 7.5 80 80 A K H < S+ 0 0 151 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.838 116.5 47.1 -64.4 -38.2 5.2 -13.9 7.5 81 81 A Y H < S+ 0 0 68 -4,-2.1 -2,-0.2 1,-0.3 -3,-0.2 0.973 123.8 23.4 -70.2 -57.8 7.3 -14.8 4.5 82 82 A N S < S- 0 0 51 -4,-2.7 -1,-0.3 -5,-0.2 3,-0.1 -0.949 82.8-125.6-118.3 128.3 10.5 -13.2 5.7 83 83 A P - 0 0 85 0, 0.0 2,-0.8 0, 0.0 3,-0.4 -0.129 40.0 -84.1 -64.5 160.7 11.4 -12.6 9.2 84 84 A P S S+ 0 0 76 0, 0.0 3,-0.1 0, 0.0 -5,-0.0 -0.570 96.3 82.6 -74.0 109.9 12.5 -9.3 10.4 85 85 A D + 0 0 151 -2,-0.8 2,-0.2 1,-0.2 3,-0.0 0.322 69.3 77.6 174.9 3.9 16.0 -8.7 9.8 86 86 A H S > S- 0 0 124 -3,-0.4 4,-1.4 -4,-0.1 -1,-0.2 -0.611 84.5-103.6-117.5-178.1 16.6 -7.6 6.3 87 87 A D H > S+ 0 0 116 -2,-0.2 4,-1.8 2,-0.2 5,-0.1 0.808 116.3 59.3 -76.5 -31.1 16.2 -4.3 4.5 88 88 A V H > S+ 0 0 65 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.941 107.5 43.1 -61.4 -51.3 13.1 -5.5 2.8 89 89 A V H > S+ 0 0 5 1,-0.2 4,-1.8 -6,-0.2 3,-0.5 0.906 112.7 53.1 -62.6 -43.5 11.2 -6.1 6.0 90 90 A A H X S+ 0 0 47 -4,-1.4 4,-1.7 1,-0.2 -1,-0.2 0.833 102.9 59.7 -61.3 -32.8 12.4 -2.9 7.5 91 91 A M H X S+ 0 0 27 -4,-1.8 4,-1.1 1,-0.2 -1,-0.2 0.863 105.3 48.4 -63.3 -37.6 11.2 -1.1 4.4 92 92 A A H X S+ 0 0 2 -4,-1.2 4,-2.1 -3,-0.5 -2,-0.2 0.892 107.4 54.2 -70.4 -41.1 7.7 -2.3 5.1 93 93 A R H X S+ 0 0 139 -4,-1.8 4,-1.4 1,-0.2 -1,-0.2 0.854 105.4 54.2 -62.1 -34.9 7.7 -1.2 8.7 94 94 A K H X S+ 0 0 123 -4,-1.7 4,-1.0 1,-0.2 -1,-0.2 0.853 111.0 46.0 -67.0 -35.1 8.7 2.3 7.7 95 95 A L H X S+ 0 0 21 -4,-1.1 4,-2.1 1,-0.2 -2,-0.2 0.805 105.0 60.9 -75.8 -32.8 5.7 2.5 5.4 96 96 A Q H X S+ 0 0 70 -4,-2.1 4,-1.8 1,-0.2 -2,-0.2 0.867 102.3 51.6 -62.6 -38.7 3.4 1.1 8.0 97 97 A D H X S+ 0 0 107 -4,-1.4 4,-1.5 1,-0.2 -1,-0.2 0.877 110.4 48.3 -65.5 -40.6 4.1 3.9 10.4 98 98 A V H X S+ 0 0 44 -4,-1.0 4,-1.7 2,-0.2 -2,-0.2 0.858 109.2 53.1 -68.0 -38.1 3.3 6.5 7.7 99 99 A F H X S+ 0 0 43 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.884 106.6 53.5 -64.9 -39.6 0.1 4.8 6.7 100 100 A E H X S+ 0 0 121 -4,-1.8 4,-0.9 1,-0.2 -1,-0.2 0.877 106.9 50.8 -61.4 -41.2 -1.0 4.8 10.2 101 101 A F H X S+ 0 0 166 -4,-1.5 4,-0.6 1,-0.2 -1,-0.2 0.855 113.1 45.2 -66.5 -36.9 -0.5 8.4 10.6 102 102 A R H >X S+ 0 0 95 -4,-1.7 4,-1.0 1,-0.2 3,-0.6 0.817 103.5 63.9 -76.4 -32.4 -2.4 9.2 7.4 103 103 A Y H 3< S+ 0 0 87 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.772 96.4 60.6 -62.6 -25.5 -5.2 6.8 8.4 104 104 A A H 3< S+ 0 0 71 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.2 0.851 109.3 40.6 -70.3 -34.9 -5.9 9.1 11.3 105 105 A K H << S+ 0 0 152 -4,-0.6 -1,-0.2 -3,-0.6 -2,-0.2 0.560 96.4 83.0 -89.6 -9.8 -6.7 11.9 9.1 106 106 A M < + 0 0 15 -4,-1.0 -2,-0.2 -100,-0.0 -1,-0.2 0.938 68.2 88.8 -57.2 -53.1 -8.5 9.9 6.7 107 107 A P 0 0 73 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.290 360.0 360.0 -51.9 140.2 -11.7 9.9 8.5 108 108 A D 0 0 166 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.677 360.0 360.0 -65.8 360.0 -13.3 12.7 7.4