==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS 07-NOV-00 1G6P . COMPND 2 MOLECULE: COLD SHOCK PROTEIN TMCSP; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; . AUTHOR W.KREMER,B.SCHULER,S.HARRIEDER,M.GEYER,W.GRONWALD,C.WELKER, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4851.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 45.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 31.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 166 0, 0.0 2,-0.3 0, 0.0 48,-0.2 0.000 360.0 360.0 360.0 -16.8 -3.0 -3.5 -9.4 2 2 A R + 0 0 122 45,-0.5 18,-1.5 46,-0.1 45,-0.3 -0.962 360.0 149.6-164.3 145.6 -5.4 -2.6 -6.5 3 3 A G E -A 19 0A 1 43,-2.0 2,-0.3 -2,-0.3 16,-0.3 -0.354 42.7 -74.4-141.7-135.9 -6.4 -3.6 -3.0 4 4 A K E -A 18 0A 112 14,-3.6 14,-3.6 41,-0.3 2,-0.4 -0.896 35.7-125.3-136.0 161.7 -7.7 -2.4 0.3 5 5 A V E +A 17 0A 6 39,-2.9 39,-0.2 -2,-0.3 12,-0.2 -0.961 32.4 159.5-121.9 135.7 -6.0 -0.3 3.0 6 6 A K E + 0 0 57 10,-1.7 2,-0.3 -2,-0.4 11,-0.2 0.581 67.4 16.2-121.6 -28.5 -5.8 -1.3 6.6 7 7 A W E -A 16 0A 131 9,-2.3 9,-2.6 2,-0.0 2,-0.4 -0.947 51.1-167.1-156.8 134.7 -2.9 0.8 8.0 8 8 A F E +A 15 0A 51 -2,-0.3 7,-0.3 7,-0.3 2,-0.3 -0.976 19.8 162.6-121.1 126.2 -0.8 3.9 7.1 9 9 A D E > +A 14 0A 80 5,-3.8 5,-1.8 -2,-0.4 -2,-0.0 -0.806 37.3 40.6-132.3 174.2 2.4 4.8 8.9 10 10 A S T 5S- 0 0 59 -2,-0.3 4,-0.4 1,-0.2 19,-0.0 0.477 86.6 -93.1 62.6 146.9 5.4 7.0 8.3 11 11 A K T 5S+ 0 0 198 2,-0.1 -1,-0.2 -3,-0.0 18,-0.1 0.680 117.7 40.6 -65.9 -16.0 5.2 10.4 6.7 12 12 A K T 5S- 0 0 107 16,-0.1 2,-0.9 21,-0.0 18,-0.1 0.171 127.1 -43.7-105.4-137.3 5.8 8.7 3.4 13 13 A G T 5S+ 0 0 0 16,-1.0 18,-0.5 -5,-0.1 19,-0.4 -0.552 81.6 135.7-100.6 72.9 4.3 5.4 2.2 14 14 A Y E < +A 9 0A 102 -5,-1.8 -5,-3.8 -2,-0.9 2,-0.3 -0.826 31.1 65.9-113.1 153.5 4.6 3.0 5.2 15 15 A G E S-AB 8 27A 1 12,-1.7 12,-2.1 -2,-0.3 2,-0.4 -0.978 74.5 -56.1 145.3-157.7 1.9 0.7 6.5 16 16 A F E -A 7 0A 77 -9,-2.6 -9,-2.3 -2,-0.3 -10,-1.7 -0.992 40.7-173.3-133.2 136.8 -0.2 -2.4 5.7 17 17 A I E -A 5 0A 0 8,-0.5 8,-4.6 -2,-0.4 2,-0.4 -0.804 18.5-133.3-124.2 168.2 -2.4 -3.0 2.8 18 18 A T E -AC 4 24A 27 -14,-3.6 -14,-3.6 6,-0.3 28,-0.3 -0.981 23.6-127.3-125.1 123.5 -4.9 -5.7 1.7 19 19 A K E > -A 3 0A 99 4,-0.9 3,-2.6 -2,-0.4 -16,-0.3 -0.442 47.5 -81.9 -69.2 142.0 -4.9 -7.2 -1.9 20 20 A D T 3 S- 0 0 83 -18,-1.5 -17,-0.1 1,-0.3 -2,-0.0 0.539 112.9 -14.5 -2.4 -91.3 -8.3 -7.1 -3.7 21 21 A E T 3 S+ 0 0 180 -17,-0.0 -1,-0.3 -18,-0.0 -2,-0.1 -0.075 126.8 80.0-116.2 29.9 -9.9 -10.2 -2.2 22 22 A G S < S- 0 0 55 -3,-2.6 2,-0.1 1,-0.3 -2,-0.1 0.585 85.5 -75.5-101.0-111.1 -6.8 -11.7 -0.7 23 23 A G - 0 0 33 -6,-0.0 -4,-0.9 1,-0.0 2,-0.4 -0.269 58.3 -53.1-132.6-141.4 -5.0 -11.0 2.5 24 24 A D B -C 18 0A 96 -6,-0.3 -6,-0.3 -2,-0.1 2,-0.2 -0.900 40.6-172.3-119.6 145.4 -2.7 -8.3 3.9 25 25 A V - 0 0 3 -8,-4.6 -8,-0.5 -2,-0.4 2,-0.3 -0.461 17.6-123.7-114.3-173.2 0.5 -6.8 2.7 26 26 A F B -d 58 0B 92 31,-0.8 33,-2.8 -10,-0.3 2,-0.3 -0.839 15.8-156.0-130.6 164.9 3.1 -4.5 4.0 27 27 A V B -B 15 0A 2 -12,-2.1 -12,-1.7 -2,-0.3 33,-0.1 -0.992 8.9-164.0-148.9 145.7 4.5 -1.2 2.7 28 28 A H - 0 0 93 31,-0.5 -16,-0.1 -2,-0.3 -14,-0.1 0.868 52.6 -92.1 -98.3 -47.5 7.8 0.6 3.2 29 29 A W S S+ 0 0 108 -16,-0.2 -16,-1.0 -17,-0.1 -15,-0.2 0.117 114.3 74.8 146.2 -11.4 7.5 4.3 2.0 30 30 A S S S+ 0 0 61 -17,-0.2 3,-0.1 29,-0.2 -16,-0.1 0.041 92.9 55.1-113.1 25.6 8.7 3.8 -1.5 31 31 A A S S+ 0 0 6 -18,-0.5 31,-2.2 30,-0.1 2,-0.4 0.576 109.2 45.3-121.3 -29.8 5.5 2.2 -2.6 32 32 A I S S+ 0 0 1 -19,-0.4 2,-0.4 29,-0.2 -18,-0.1 -0.543 81.1 122.7-114.8 61.6 3.3 5.1 -1.4 33 33 A E + 0 0 106 -2,-0.4 2,-0.2 -3,-0.1 -21,-0.0 -0.798 32.6 138.3-124.3 84.0 5.4 7.8 -2.9 34 34 A M - 0 0 99 -2,-0.4 4,-0.2 1,-0.0 -2,-0.0 -0.699 50.3-139.0-123.3 175.6 3.3 9.9 -5.3 35 35 A E S S+ 0 0 199 -2,-0.2 -1,-0.0 2,-0.1 -2,-0.0 0.096 93.3 52.7-122.9 21.1 2.8 13.6 -6.1 36 36 A G S S- 0 0 67 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.715 125.1 -27.0-116.9 -61.9 -0.9 13.7 -6.6 37 37 A F + 0 0 117 27,-0.0 2,-0.4 0, 0.0 27,-0.2 -0.614 69.6 156.9-164.3 94.6 -2.6 12.2 -3.5 38 38 A K + 0 0 43 -4,-0.2 25,-0.1 -2,-0.2 -6,-0.1 -0.987 28.2 101.2-126.2 130.2 -0.9 9.6 -1.4 39 39 A T - 0 0 59 -2,-0.4 -1,-0.1 24,-0.0 -7,-0.0 0.325 62.6-131.1-172.7 -32.5 -1.8 8.9 2.2 40 40 A L - 0 0 8 -3,-0.2 -32,-0.1 1,-0.1 -2,-0.1 0.858 1.7-143.9 60.7 112.4 -3.8 5.8 2.7 41 41 A K - 0 0 80 -34,-0.1 -1,-0.1 1,-0.1 -33,-0.1 0.513 36.4-123.5 -80.9 -4.6 -6.8 6.3 4.9 42 42 A E S S+ 0 0 75 -35,-0.2 -1,-0.1 -26,-0.0 -2,-0.0 0.432 99.4 63.6 76.3 -0.6 -6.2 2.8 6.2 43 43 A G S S+ 0 0 52 2,-0.1 2,-0.2 -39,-0.0 -37,-0.2 -0.139 87.8 72.2-144.6 42.7 -9.8 1.8 5.2 44 44 A Q S S- 0 0 70 -39,-0.2 -39,-2.9 0, 0.0 2,-0.4 -0.597 80.0 -83.2-138.9-162.0 -10.1 2.0 1.4 45 45 A V E -E 65 0B 27 20,-1.4 20,-2.3 -41,-0.3 -41,-0.3 -0.955 40.2-167.8-119.6 132.1 -9.0 0.5 -1.8 46 46 A V E -E 64 0B 0 -2,-0.4 -43,-2.0 -28,-0.3 2,-0.6 -0.683 25.6-121.7-114.0 172.7 -5.7 1.3 -3.4 47 47 A E E +E 63 0B 68 16,-0.8 16,-1.8 -45,-0.3 -45,-0.5 -0.927 58.2 136.8-116.3 96.8 -4.2 0.7 -6.8 48 48 A F E -E 62 0B 6 -2,-0.6 2,-0.3 14,-0.2 14,-0.2 -0.859 44.4-137.8-140.1 177.8 -1.0 -1.4 -6.1 49 49 A E E -E 61 0B 108 12,-1.2 11,-1.9 -2,-0.3 12,-0.7 -0.897 18.5-150.3-132.9 158.2 1.3 -4.2 -6.9 50 50 A I E -E 59 0B 28 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.996 7.3-168.5-138.7 142.1 3.1 -6.6 -4.7 51 51 A Q E -E 58 0B 151 7,-1.7 7,-1.7 -2,-0.4 2,-0.5 -0.993 5.7-160.8-131.0 133.6 6.4 -8.5 -4.9 52 52 A E + 0 0 156 -2,-0.4 4,-0.1 5,-0.2 2,-0.1 -0.951 26.0 141.0-117.2 130.5 7.6 -11.4 -2.7 53 53 A G S S- 0 0 63 -2,-0.5 -1,-0.0 3,-0.3 0, 0.0 -0.010 72.0 -24.0-129.8-124.7 11.2 -12.4 -2.3 54 54 A K S S+ 0 0 199 2,-0.1 -2,-0.0 -2,-0.1 2,-0.0 0.754 135.2 27.9 -69.2 -25.2 13.5 -13.6 0.5 55 55 A K S S- 0 0 188 1,-0.2 -3,-0.0 0, 0.0 0, 0.0 0.298 112.9 -49.3-106.1-127.4 11.2 -11.8 3.0 56 56 A G - 0 0 35 -4,-0.1 2,-0.3 1,-0.0 -3,-0.3 -0.725 60.4 -84.3-114.7 166.5 7.4 -11.1 2.6 57 57 A P + 0 0 50 0, 0.0 -31,-0.8 0, 0.0 2,-0.3 -0.510 51.5 179.5 -70.7 127.1 5.2 -9.6 -0.1 58 58 A Q E -dE 26 51B 60 -7,-1.7 -7,-1.7 -2,-0.3 -31,-0.2 -0.944 34.3 -98.8-129.8 153.6 5.1 -5.8 -0.0 59 59 A A E + E 0 50B 1 -33,-2.8 -31,-0.5 -2,-0.3 -9,-0.2 -0.448 35.6 173.4 -68.0 134.2 3.5 -3.1 -2.0 60 60 A A E S+ 0 0 39 -11,-1.9 2,-0.5 1,-0.4 -1,-0.2 0.645 72.6 35.9-113.1 -30.2 5.8 -1.5 -4.5 61 61 A H E S- E 0 49B 132 -12,-0.7 -12,-1.2 -29,-0.1 2,-0.4 -0.996 72.8-179.1-129.4 117.8 3.4 0.7 -6.4 62 62 A V E + E 0 48B 6 -31,-2.2 -14,-0.2 -2,-0.5 2,-0.2 -0.932 11.1 154.3-132.4 115.3 0.7 2.4 -4.3 63 63 A K E - E 0 47B 72 -16,-1.8 -16,-0.8 -2,-0.4 2,-0.4 -0.535 39.5-100.8-119.0-175.5 -2.0 4.7 -5.6 64 64 A V E + E 0 46B 43 -18,-0.3 2,-0.3 -2,-0.2 -18,-0.3 -0.913 40.3 153.3-120.8 146.6 -5.5 5.5 -4.1 65 65 A V E E 0 45B 19 -20,-2.3 -20,-1.4 -2,-0.4 -18,-0.0 -0.915 360.0 360.0-152.1 175.0 -8.9 4.3 -5.0 66 66 A E 0 0 216 -2,-0.3 -20,-0.1 -22,-0.2 -1,-0.1 0.412 360.0 360.0-140.7 360.0 -12.4 3.7 -3.4