==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 16-NOV-00 1G89 . COMPND 2 MOLECULE: INDOLICIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.ROZEK,C.L.FRIEDRICH,R.E.HANCOCK . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2179.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 179 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 169.1 -16.7 3.1 2.9 2 2 A L - 0 0 133 1,-0.0 0, 0.0 2,-0.0 0, 0.0 -0.032 360.0-115.2 -41.3 146.4 -13.5 2.2 1.0 3 3 A P - 0 0 79 0, 0.0 3,-0.1 0, 0.0 -1,-0.0 0.081 16.4-118.9 -73.2-169.7 -12.8 -1.5 1.0 4 4 A W S S+ 0 0 201 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.274 85.9 90.7-130.8 49.3 -9.8 -3.2 2.7 5 5 A K + 0 0 157 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 0.207 50.1 136.7-126.5 13.5 -7.9 -4.8 -0.2 6 6 A W - 0 0 206 -3,-0.1 3,-0.1 1,-0.1 2,-0.0 -0.267 46.6-130.6 -62.7 149.9 -5.6 -2.0 -1.2 7 7 A P S S+ 0 0 68 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.087 74.3 40.1 -90.5-168.3 -2.0 -3.0 -1.9 8 8 A W S S- 0 0 210 2,-0.0 3,-0.1 1,-0.0 -2,-0.0 0.837 92.2-115.5 28.1 84.7 1.4 -1.6 -0.7 9 9 A W - 0 0 193 1,-0.1 2,-0.7 -3,-0.1 -1,-0.0 -0.013 26.7-112.2 -41.9 149.7 0.5 -1.0 2.9 10 10 A P + 0 0 91 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.800 46.3 168.0 -93.2 111.1 0.6 2.7 3.9 11 11 A W - 0 0 159 -2,-0.7 2,-2.5 -3,-0.1 0, 0.0 -0.374 56.9 -67.3-109.0-169.0 3.5 3.4 6.4 12 12 A R 0 0 251 1,-0.2 -1,-0.0 -2,-0.1 0, 0.0 -0.213 360.0 360.0 -76.7 53.6 5.0 6.6 7.7 13 13 A R 0 0 252 -2,-2.5 -1,-0.2 0, 0.0 0, 0.0 0.790 360.0 360.0 -55.2 360.0 6.4 7.4 4.2