==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 16-NOV-00 1G8C . COMPND 2 MOLECULE: INDOLICIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.ROZEK,C.L.FRIEDRICH,R.E.HANCOCK . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2256.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 212 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 171.4 -18.7 -7.5 3.0 2 2 A L - 0 0 119 1,-0.1 0, 0.0 3,-0.0 0, 0.0 -0.439 360.0-146.7 -71.2 145.0 -15.0 -6.5 2.5 3 3 A P - 0 0 113 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 0.986 60.9 -56.9 -74.9 -72.4 -14.3 -2.8 2.1 4 4 A W - 0 0 207 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 -0.335 43.8-141.0-177.4 87.8 -11.3 -2.8 -0.4 5 5 A K - 0 0 188 1,-0.0 -3,-0.0 -2,-0.0 0, 0.0 -0.325 28.0-160.3 -55.8 125.0 -8.0 -4.6 0.2 6 6 A W - 0 0 193 -2,-0.1 2,-0.9 2,-0.0 -1,-0.0 -0.915 21.1-118.5-116.5 141.5 -5.3 -2.2 -1.1 7 7 A P + 0 0 105 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.606 56.0 138.8 -75.1 104.3 -1.7 -3.0 -2.0 8 8 A W - 0 0 205 -2,-0.9 -2,-0.0 2,-0.0 0, 0.0 -0.104 24.2-179.8-140.8 40.9 0.4 -1.0 0.4 9 9 A W - 0 0 201 1,-0.2 2,-2.7 2,-0.0 3,-0.2 -0.234 22.0-147.6 -48.5 104.2 3.3 -3.3 1.4 10 10 A P - 0 0 62 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.383 20.8-178.4 -74.4 65.2 5.2 -1.0 3.8 11 11 A W + 0 0 235 -2,-2.7 2,-0.7 2,-0.1 -2,-0.0 0.868 66.8 69.8 -30.9 -63.2 8.6 -2.6 2.8 12 12 A R 0 0 187 -3,-0.2 -1,-0.1 1,-0.1 0, 0.0 -0.445 360.0 360.0 -63.5 107.6 10.4 -0.3 5.2 13 13 A R 0 0 229 -2,-0.7 -1,-0.1 0, 0.0 -2,-0.1 -0.595 360.0 360.0 -74.9 360.0 9.4 -1.7 8.7