==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 07-MAR-06 2G9P . COMPND 2 MOLECULE: ANTIMICROBIAL PEPTIDE LATARCIN 2A; . SOURCE 2 SYNTHETIC: YES; . AUTHOR P.V.DUBOVSKII,P.E.VOLYNSKY,A.A.POLYANSKY,V.V.CHUPIN, . 26 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2979.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 65.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 105 0, 0.0 4,-0.8 0, 0.0 3,-0.4 0.000 360.0 360.0 360.0 161.2 -15.4 -8.7 -1.6 2 2 A L H > + 0 0 125 1,-0.2 4,-2.8 2,-0.2 3,-0.4 0.815 360.0 66.2 -69.8 -31.3 -14.3 -7.5 1.8 3 3 A F H > S+ 0 0 146 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.860 95.9 56.8 -56.1 -38.4 -10.9 -6.8 0.4 4 4 A G H > S+ 0 0 43 -3,-0.4 4,-2.4 2,-0.2 -1,-0.2 0.873 110.2 43.6 -61.6 -39.5 -12.4 -4.1 -1.8 5 5 A K H X S+ 0 0 152 -4,-0.8 4,-2.8 -3,-0.4 -2,-0.2 0.953 112.1 51.4 -72.1 -52.4 -13.8 -2.3 1.2 6 6 A L H X S+ 0 0 80 -4,-2.8 4,-1.8 1,-0.2 -2,-0.2 0.909 113.7 46.6 -45.4 -48.5 -10.6 -2.7 3.3 7 7 A I H X>S+ 0 0 19 -4,-2.7 4,-2.9 1,-0.2 5,-1.6 0.929 109.0 53.3 -66.9 -47.7 -8.7 -1.2 0.4 8 8 A K H <5S+ 0 0 174 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.912 108.4 52.3 -45.4 -48.1 -11.2 1.6 -0.1 9 9 A K H <5S+ 0 0 178 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.862 113.9 41.5 -65.4 -38.2 -10.8 2.4 3.6 10 10 A F H <5S- 0 0 104 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.817 104.8-128.7 -74.3 -33.0 -7.0 2.6 3.3 11 11 A G T <5 - 0 0 47 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.1 0.835 68.0 -58.8 78.7 38.8 -7.1 4.4 -0.0 12 12 A R S > + 0 0 143 -6,-0.3 4,-2.4 2,-0.2 5,-0.2 0.771 69.4 57.5 -75.0 -28.9 -2.2 2.8 1.0 14 14 A A H > S+ 0 0 45 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.901 110.1 43.0 -64.3 -42.7 -1.7 -0.9 1.5 15 15 A I H > S+ 0 0 79 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.903 112.9 52.7 -69.3 -42.9 -0.8 -1.1 -2.2 16 16 A S H X S+ 0 0 70 -4,-2.0 4,-2.5 1,-0.2 -2,-0.2 0.896 112.8 44.4 -59.1 -42.7 1.3 2.0 -2.0 17 17 A Y H X S+ 0 0 163 -4,-2.4 4,-2.6 2,-0.2 -1,-0.2 0.827 111.4 53.7 -72.8 -33.5 3.3 0.6 0.9 18 18 A A H X S+ 0 0 53 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.915 114.0 41.6 -65.2 -44.5 3.6 -2.8 -0.8 19 19 A V H < S+ 0 0 65 -4,-2.7 4,-0.3 2,-0.2 -2,-0.2 0.902 114.8 51.1 -70.2 -42.6 5.1 -1.2 -3.9 20 20 A K H >< S+ 0 0 149 -4,-2.5 3,-0.9 -5,-0.2 -2,-0.2 0.915 113.4 45.4 -60.4 -45.0 7.2 1.1 -1.8 21 21 A K H >< S+ 0 0 121 -4,-2.6 3,-1.6 1,-0.2 -1,-0.2 0.902 112.2 50.8 -62.8 -42.6 8.5 -1.8 0.2 22 22 A A T 3< S+ 0 0 77 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.371 119.1 38.1 -86.3 4.9 9.1 -3.9 -2.9 23 23 A R T < S+ 0 0 211 -3,-0.9 -1,-0.3 -4,-0.3 -2,-0.2 0.007 135.1 18.7-131.9 25.4 11.0 -1.0 -4.5 24 24 A G < + 0 0 42 -3,-1.6 -2,-0.1 -5,-0.1 -1,-0.1 -0.109 57.4 170.3 165.7 80.7 12.7 0.1 -1.3 25 25 A K 0 0 165 1,-0.3 -3,-0.1 -3,-0.1 -4,-0.1 0.934 360.0 360.0 -69.8 -48.0 13.0 -2.2 1.7 26 26 A H 0 0 242 -5,-0.1 -1,-0.3 0, 0.0 0, 0.0 -0.982 360.0 360.0-160.9 360.0 15.3 -0.0 3.7