==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-SEP-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 28-JUN-93 1GAT . COMPND 2 MOLECULE: DNA (5'-D(P*AP*GP*AP*TP*AP*AP*AP*C)3'); . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.M.CLORE,J.G.OMICHINSKI,A.M.GRONENBORN . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5582.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 55.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 8.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 216 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 96.3 -4.6 10.1 15.0 2 2 A R > + 0 0 148 2,-0.1 3,-1.6 3,-0.0 2,-0.7 0.212 360.0 134.5-102.6 17.6 -7.0 8.2 12.7 3 3 A A T 3 S+ 0 0 93 1,-0.3 3,-0.1 3,-0.0 11,-0.0 -0.520 78.3 22.5 -68.5 108.4 -7.6 5.3 15.2 4 4 A G T 3 S+ 0 0 60 -2,-0.7 2,-2.0 1,-0.2 -1,-0.3 -0.026 86.3 121.2 121.1 -27.8 -11.4 4.9 15.1 5 5 A T < - 0 0 36 -3,-1.6 2,-0.5 8,-0.1 -1,-0.2 -0.438 46.0-172.5 -67.8 85.8 -11.8 6.5 11.6 6 6 A V - 0 0 78 -2,-2.0 7,-0.2 -3,-0.1 2,-0.2 -0.718 33.5-108.0 -85.5 123.5 -13.4 3.4 10.1 7 7 A C > - 0 0 1 5,-1.8 4,-3.3 -2,-0.5 3,-0.4 -0.284 22.5-148.7 -51.6 113.2 -13.9 3.8 6.3 8 8 A S T 4 S+ 0 0 64 18,-1.4 -1,-0.2 1,-0.2 19,-0.1 0.688 97.5 48.7 -60.5 -13.8 -17.7 4.2 5.9 9 9 A N T 4 S+ 0 0 58 17,-0.3 -1,-0.2 3,-0.1 35,-0.1 0.762 135.2 4.1 -98.1 -29.1 -17.3 2.5 2.5 10 10 A C T 4 S- 0 0 2 -3,-0.4 -2,-0.2 2,-0.1 -3,-0.1 0.259 87.7-121.6-141.7 17.2 -15.2 -0.6 3.5 11 11 A Q < + 0 0 150 -4,-3.3 2,-0.4 1,-0.2 -3,-0.1 0.674 61.4 148.0 52.6 15.9 -14.8 -0.5 7.3 12 12 A T - 0 0 8 -5,-0.2 -5,-1.8 1,-0.1 16,-0.2 -0.672 33.9-170.4 -85.0 131.9 -11.0 -0.4 6.9 13 13 A S S S+ 0 0 68 -2,-0.4 2,-0.6 -7,-0.2 -1,-0.1 0.706 72.6 71.6 -91.0 -21.1 -9.1 1.6 9.6 14 14 A T + 0 0 47 34,-0.2 2,-0.4 35,-0.2 34,-0.1 -0.832 65.0 161.9 -97.4 120.4 -5.7 1.5 7.7 15 15 A T - 0 0 19 -2,-0.6 3,-0.3 1,-0.1 36,-0.1 -0.994 44.9-139.4-140.4 147.1 -5.7 3.7 4.6 16 16 A T S S+ 0 0 93 -2,-0.4 2,-0.3 1,-0.3 -1,-0.1 0.878 102.0 11.9 -70.6 -35.1 -3.0 5.2 2.4 17 17 A L S S- 0 0 104 -3,-0.1 12,-2.6 2,-0.0 2,-1.0 -0.885 76.7-137.0-145.6 110.1 -5.0 8.5 2.2 18 18 A W E -A 28 0A 59 -2,-0.3 2,-1.4 -3,-0.3 10,-0.2 -0.511 19.5-157.5 -69.2 102.7 -8.0 9.2 4.5 19 19 A R E -A 27 0A 143 8,-1.3 8,-2.4 -2,-1.0 2,-1.0 -0.635 4.2-155.7 -84.8 91.8 -10.4 10.8 2.1 20 20 A R E -A 26 0A 176 -2,-1.4 -1,-0.0 6,-0.2 -2,-0.0 -0.520 15.5-140.1 -69.0 101.5 -12.7 12.8 4.4 21 21 A S E >> -A 25 0A 41 4,-1.7 3,-2.2 -2,-1.0 4,-0.8 -0.413 12.8-124.6 -65.4 139.5 -15.9 13.0 2.4 22 22 A P T 34 S+ 0 0 136 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.819 110.8 64.8 -54.2 -33.5 -17.6 16.4 2.6 23 23 A M T 34 S- 0 0 175 2,-0.1 -2,-0.1 1,-0.1 -3,-0.0 0.760 128.6 -96.8 -63.6 -20.7 -20.9 14.7 3.8 24 24 A G T <4 S+ 0 0 39 -3,-2.2 -1,-0.1 1,-0.2 -4,-0.1 0.717 83.8 130.0 108.9 33.3 -18.9 13.6 6.9 25 25 A D E < -A 21 0A 64 -4,-0.8 -4,-1.7 -6,-0.1 2,-0.9 -0.873 50.0-146.3-124.9 102.1 -17.8 10.1 5.9 26 26 A P E +A 20 0A 21 0, 0.0 -18,-1.4 0, 0.0 2,-0.5 -0.482 28.0 178.5 -64.5 101.6 -14.1 9.3 6.3 27 27 A V E -A 19 0A 11 -8,-2.4 -8,-1.3 -2,-0.9 5,-0.2 -0.931 34.0-112.0-115.3 124.2 -13.5 6.9 3.3 28 28 A C E >> -A 18 0A 2 -2,-0.5 3,-1.9 -16,-0.2 4,-1.4 -0.181 34.9-111.3 -48.8 133.5 -10.1 5.4 2.6 29 29 A N H 3> S+ 0 0 30 -12,-2.6 4,-2.9 1,-0.3 5,-0.2 0.848 116.4 65.6 -37.3 -46.4 -8.8 6.9 -0.7 30 30 A A H 3> S+ 0 0 41 1,-0.2 4,-2.1 2,-0.2 5,-0.4 0.907 102.5 47.0 -48.0 -44.7 -9.1 3.4 -2.4 31 31 A C H <> S+ 0 0 1 -3,-1.9 4,-2.2 1,-0.2 -1,-0.2 0.938 112.4 50.0 -65.2 -43.1 -12.9 3.7 -1.9 32 32 A G H X S+ 0 0 18 -4,-1.4 4,-1.4 -5,-0.2 -2,-0.2 0.879 114.2 46.0 -63.4 -36.7 -12.9 7.3 -3.3 33 33 A L H >X S+ 0 0 89 -4,-2.9 4,-1.4 2,-0.2 3,-0.7 0.995 117.2 38.5 -71.8 -66.0 -10.8 6.1 -6.4 34 34 A Y H >X>S+ 0 0 76 -4,-2.1 4,-1.7 1,-0.3 5,-0.8 0.923 111.7 61.7 -52.1 -41.6 -12.7 3.0 -7.4 35 35 A Y H 3X5S+ 0 0 110 -4,-2.2 4,-2.2 -5,-0.4 -1,-0.3 0.939 102.9 50.0 -51.6 -43.7 -16.0 4.8 -6.5 36 36 A K H <<5S+ 0 0 161 -4,-1.4 -1,-0.3 -3,-0.7 -2,-0.2 0.846 107.4 58.2 -63.8 -29.7 -15.0 7.3 -9.3 37 37 A L H <<5S+ 0 0 110 -4,-1.4 -2,-0.2 -3,-0.7 -1,-0.2 0.998 132.2 2.6 -64.3 -66.3 -14.4 4.4 -11.7 38 38 A H H <5S- 0 0 108 -4,-1.7 -2,-0.2 2,-0.1 -3,-0.2 0.633 91.0-132.9 -97.4 -15.3 -17.9 2.7 -11.6 39 39 A Q << + 0 0 145 -4,-2.2 2,-0.2 -5,-0.8 -4,-0.1 0.886 67.6 112.6 65.8 38.3 -19.6 5.3 -9.2 40 40 A V S S- 0 0 61 -6,-0.2 2,-0.4 -5,-0.2 -1,-0.2 -0.775 76.3 -74.9-132.7 176.9 -21.1 2.5 -7.0 41 41 A N - 0 0 133 -2,-0.2 -32,-0.0 -3,-0.1 -31,-0.0 -0.618 45.1-133.8 -81.7 125.3 -20.7 1.1 -3.5 42 42 A R - 0 0 45 -2,-0.4 2,-0.3 -11,-0.1 -1,-0.0 -0.674 7.3-138.5 -82.9 126.1 -17.5 -1.0 -2.8 43 43 A P > - 0 0 80 0, 0.0 3,-0.9 0, 0.0 2,-0.5 -0.593 19.6-129.4 -76.2 131.3 -17.8 -4.3 -1.0 44 44 A L G > S+ 0 0 84 -2,-0.3 3,-1.4 1,-0.2 -34,-0.1 0.153 79.0 113.7 -74.6 30.8 -14.9 -4.5 1.5 45 45 A T G 3 S+ 0 0 126 -2,-0.5 -1,-0.2 1,-0.3 -35,-0.0 0.831 76.4 52.6 -69.4 -26.8 -14.0 -8.1 0.1 46 46 A M G < S+ 0 0 147 -3,-0.9 -1,-0.3 2,-0.0 -2,-0.1 0.359 88.1 115.9 -88.4 7.5 -10.8 -6.6 -1.3 47 47 A R < - 0 0 67 -3,-1.4 2,-0.3 -4,-0.1 3,-0.1 -0.173 47.4-163.9 -69.1 170.7 -9.9 -5.2 2.2 48 48 A K - 0 0 140 1,-0.2 -34,-0.2 -34,-0.1 4,-0.1 -0.977 32.5-104.8-152.1 163.6 -6.8 -6.5 4.1 49 49 A D S S+ 0 0 160 -2,-0.3 2,-0.2 2,-0.1 -35,-0.2 0.987 104.2 16.5 -56.3 -62.5 -5.3 -6.5 7.6 50 50 A G S S- 0 0 44 1,-0.1 3,-0.1 -3,-0.1 2,-0.0 -0.692 106.9 -71.9-109.6 165.2 -2.7 -3.8 6.9 51 51 A I - 0 0 70 -2,-0.2 -1,-0.1 1,-0.1 -36,-0.1 -0.304 57.3-115.8 -54.9 127.0 -2.4 -1.3 4.1 52 52 A Q + 0 0 110 -4,-0.1 2,-0.3 -3,-0.0 -1,-0.1 -0.277 43.2 174.8 -61.9 150.7 -1.4 -3.2 0.9 53 53 A T + 0 0 127 -3,-0.1 2,-0.2 3,-0.0 -3,-0.0 -0.990 11.3 171.9-155.4 160.2 2.0 -2.2 -0.5 54 54 A R - 0 0 221 -2,-0.3 2,-1.1 3,-0.0 3,-0.0 -0.805 59.2 -31.7-151.4-166.4 4.4 -3.3 -3.3 55 55 A N S S- 0 0 163 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 -0.408 77.5-121.1 -60.9 96.9 7.7 -2.3 -5.0 56 56 A R - 0 0 219 -2,-1.1 -1,-0.1 1,-0.1 3,-0.1 -0.057 34.8 -91.2 -41.8 137.9 7.2 1.5 -4.6 57 57 A K - 0 0 184 1,-0.1 -1,-0.1 -3,-0.0 3,-0.1 -0.275 48.1-109.2 -54.0 131.1 7.2 3.3 -7.9 58 58 A V - 0 0 117 -3,-0.1 2,-0.4 1,-0.1 -1,-0.1 -0.314 42.8 -91.3 -62.2 145.4 10.8 4.4 -8.8 59 59 A S 0 0 117 1,-0.1 -1,-0.1 -3,-0.1 -3,-0.0 -0.416 360.0 360.0 -61.2 114.5 11.3 8.2 -8.5 60 60 A S 0 0 166 -2,-0.4 -1,-0.1 -3,-0.1 -3,-0.0 -0.686 360.0 360.0 -82.6 360.0 10.5 9.5 -12.1