==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 07-NOV-97 5GAT . COMPND 2 MOLECULE: DNA (5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.M.CLORE,M.STARICH,M.WIKSTROM,A.M.GRONENBORN . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6421.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 24 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 160 0, 0.0 3,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 149.3 26.0 20.3 22.5 2 2 A K + 0 0 212 1,-0.2 0, 0.0 2,-0.1 0, 0.0 0.660 360.0 79.5 -74.2 -11.8 26.9 18.7 19.2 3 3 A N + 0 0 95 1,-0.2 -1,-0.2 2,-0.0 3,-0.1 0.971 60.4 174.6 -60.6 -50.1 25.9 15.3 20.7 4 4 A G + 0 0 57 -3,-0.4 -1,-0.2 1,-0.1 3,-0.1 0.477 41.5 117.2 60.1 -6.4 22.2 16.0 20.0 5 5 A E S S- 0 0 142 1,-0.2 2,-0.1 2,-0.1 -1,-0.1 0.343 79.4 -26.1 -70.0-148.0 21.6 12.4 21.3 6 6 A Q + 0 0 136 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.0 -0.412 68.0 146.6 -66.0 136.9 19.6 11.7 24.4 7 7 A N + 0 0 95 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.1 0.472 61.3 52.4-142.5 -26.3 19.6 14.5 27.0 8 8 A G - 0 0 57 2,-0.0 2,-1.1 0, 0.0 -1,-0.2 -0.885 68.8-154.1-121.1 102.2 16.2 14.4 28.7 9 9 A P - 0 0 98 0, 0.0 2,-0.2 0, 0.0 9,-0.0 -0.597 13.9-159.5 -77.4 102.2 15.2 11.0 30.2 10 10 A T - 0 0 62 -2,-1.1 2,-0.4 8,-0.1 -2,-0.0 -0.551 5.1-157.3 -78.7 144.7 11.3 11.0 30.2 11 11 A T - 0 0 71 -2,-0.2 2,-0.8 22,-0.0 7,-0.1 -0.981 15.2-132.4-127.9 131.3 9.8 8.5 32.7 12 12 A C > - 0 0 0 -2,-0.4 4,-2.8 5,-0.4 20,-0.2 -0.670 12.2-157.0 -80.3 113.5 6.2 7.0 32.5 13 13 A T T 4 S+ 0 0 57 18,-1.7 -1,-0.2 -2,-0.8 19,-0.1 0.656 92.3 48.3 -66.6 -11.5 4.8 7.3 36.0 14 14 A N T 4 S- 0 0 45 17,-0.3 -1,-0.2 3,-0.1 18,-0.1 0.829 137.5 -1.1 -96.8 -39.6 2.4 4.5 35.2 15 15 A C T 4 S- 0 0 22 2,-0.1 -2,-0.2 37,-0.0 3,-0.1 0.406 80.5-132.1-132.2 0.0 4.7 1.9 33.6 16 16 A F < + 0 0 151 -4,-2.8 2,-0.2 1,-0.2 -3,-0.1 0.605 50.6 156.9 60.0 6.1 8.2 3.5 33.7 17 17 A T - 0 0 17 1,-0.2 -5,-0.4 -6,-0.1 -1,-0.2 -0.446 27.4-172.3 -66.1 133.4 8.6 2.4 30.0 18 18 A Q + 0 0 153 -2,-0.2 2,-0.7 -3,-0.1 -1,-0.2 0.473 65.1 83.4-102.6 -4.9 11.2 4.6 28.3 19 19 A T + 0 0 86 2,-0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.865 57.2 125.7-103.0 113.6 10.5 3.2 24.8 20 20 A T - 0 0 28 -2,-0.7 3,-0.1 13,-0.1 36,-0.0 -0.963 56.5-136.3-163.7 146.4 7.5 4.8 23.1 21 21 A P S S+ 0 0 119 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.676 96.5 23.4 -79.3 -18.8 6.7 6.5 19.8 22 22 A L S S- 0 0 86 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.929 73.6-136.8-152.9 125.1 4.7 9.2 21.4 23 23 A W - 0 0 89 -2,-0.3 10,-0.2 -3,-0.1 2,-0.2 -0.672 26.6-167.3 -83.7 127.7 4.8 10.6 25.0 24 24 A R E -A 32 0A 99 8,-2.3 8,-3.7 9,-0.5 2,-0.3 -0.616 5.7-148.5-109.3 171.6 1.3 11.2 26.5 25 25 A R E -A 31 0A 204 6,-0.3 8,-0.0 -2,-0.2 -2,-0.0 -0.974 16.1-118.9-140.0 154.0 0.2 13.1 29.7 26 26 A N E >> -A 30 0A 28 4,-3.1 3,-4.0 -2,-0.3 4,-0.6 -0.762 32.7-112.7 -93.6 139.3 -2.7 12.7 32.2 27 27 A P T 34 S+ 0 0 109 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.625 119.7 65.5 -44.2 -7.6 -5.2 15.6 32.5 28 28 A E T 34 S- 0 0 156 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.388 123.8-104.0 -97.9 3.3 -3.6 15.9 36.0 29 29 A G T <4 S+ 0 0 59 -3,-4.0 0, 0.0 1,-0.3 0, 0.0 0.643 76.6 138.3 85.2 14.6 -0.2 16.9 34.5 30 30 A Q E < -A 26 0A 96 -4,-0.6 -4,-3.1 1,-0.0 -1,-0.3 -0.767 55.9-117.5 -93.8 137.0 1.4 13.5 35.0 31 31 A P E +A 25 0A 50 0, 0.0 -18,-1.7 0, 0.0 -17,-0.3 -0.517 36.4 177.8 -74.2 135.5 3.7 12.1 32.2 32 32 A L E -A 24 0A 2 -8,-3.7 -8,-2.3 -2,-0.2 -20,-0.1 -0.909 22.8-129.2-130.9 160.7 2.5 8.9 30.5 33 33 A C - 0 0 3 -2,-0.3 -9,-0.5 -10,-0.2 4,-0.4 0.319 50.4 -69.9 -86.9-138.9 3.9 6.9 27.6 34 34 A N S > S+ 0 0 34 -11,-0.1 4,-1.9 3,-0.1 5,-0.2 0.963 124.8 28.1 -82.8 -71.7 1.8 5.7 24.6 35 35 A A H >>S+ 0 0 50 1,-0.2 4,-3.7 2,-0.2 5,-0.7 0.839 113.9 63.8 -63.8 -33.7 -0.6 3.0 25.7 36 36 A C H >>S+ 0 0 19 2,-0.2 4,-2.6 3,-0.2 5,-0.6 0.982 111.7 34.9 -57.0 -55.9 -0.8 4.2 29.4 37 37 A G H >5S+ 0 0 9 -4,-0.4 4,-1.3 3,-0.2 5,-0.3 0.934 124.3 44.5 -64.6 -44.4 -2.5 7.5 28.4 38 38 A L H X5S+ 0 0 78 -4,-1.9 4,-1.0 -5,-0.2 -2,-0.2 0.925 123.9 34.2 -67.3 -44.0 -4.4 6.0 25.5 39 39 A F H X5S+ 0 0 73 -4,-3.7 4,-1.8 -5,-0.2 5,-0.3 0.938 120.1 46.2 -78.9 -49.6 -5.6 2.9 27.4 40 40 A L H X - 0 0 85 0, 0.0 3,-1.5 0, 0.0 4,-0.0 0.013 32.2-148.1 -34.5 113.5 -3.0 -5.0 36.1 49 49 A L G > S+ 0 0 114 1,-0.3 3,-3.5 2,-0.1 -35,-0.0 0.592 78.5 106.2 -63.9 -3.3 0.1 -3.4 34.7 50 50 A S G 3 + 0 0 99 1,-0.3 -1,-0.3 3,-0.0 0, 0.0 0.715 60.5 76.3 -52.6 -12.3 1.1 -7.0 34.2 51 51 A L G < + 0 0 120 -3,-1.5 -1,-0.3 -4,-0.1 -2,-0.1 0.501 69.6 129.8 -77.7 3.2 0.3 -6.1 30.5 52 52 A K < + 0 0 91 -3,-3.5 2,-0.3 -4,-0.0 -3,-0.0 -0.335 33.1 169.7 -58.0 128.2 3.7 -4.4 30.7 53 53 A T - 0 0 76 -2,-0.1 -2,-0.0 1,-0.1 -1,-0.0 -1.000 38.2-154.3-144.6 142.9 5.9 -5.5 27.8 54 54 A D S S+ 0 0 129 -2,-0.3 2,-0.5 -37,-0.0 -1,-0.1 0.499 81.4 79.6 -92.6 -3.7 9.2 -4.3 26.4 55 55 A V - 0 0 119 2,-0.0 2,-0.4 0, 0.0 -1,-0.0 -0.905 60.1-174.1-108.6 125.2 8.3 -5.7 22.9 56 56 A I - 0 0 87 -2,-0.5 2,-0.4 -36,-0.0 -2,-0.0 -0.955 26.4-123.0-118.8 131.0 6.0 -3.6 20.7 57 57 A K - 0 0 180 -2,-0.4 2,-0.4 1,-0.0 -2,-0.0 -0.552 26.3-137.9 -72.6 127.7 4.7 -4.8 17.4 58 58 A K - 0 0 185 -2,-0.4 2,-0.1 1,-0.0 -1,-0.0 -0.696 17.4-150.9 -88.1 134.2 5.7 -2.3 14.6 59 59 A R - 0 0 221 -2,-0.4 -1,-0.0 1,-0.2 0, 0.0 -0.470 26.8 -84.5 -98.9 172.1 2.9 -1.6 12.0 60 60 A N - 0 0 164 -2,-0.1 2,-0.3 1,-0.1 -1,-0.2 0.022 44.0-143.2 -65.8-179.2 3.3 -0.6 8.3 61 61 A R - 0 0 193 1,-0.1 -1,-0.1 2,-0.0 2,-0.0 -0.849 19.2 -87.7-140.0 177.1 3.8 3.0 7.2 62 62 A N - 0 0 90 -2,-0.3 3,-0.2 1,-0.1 -1,-0.1 -0.250 53.4 -89.9 -81.2 175.1 2.9 5.4 4.4 63 63 A S S S- 0 0 135 1,-0.2 2,-0.3 -2,-0.0 -1,-0.1 0.928 108.3 -7.2 -53.5 -46.3 4.8 5.8 1.1 64 64 A A - 0 0 79 2,-0.0 2,-0.6 0, 0.0 -1,-0.2 -0.908 60.2-161.5-156.4 126.0 7.1 8.5 2.7 65 65 A N 0 0 112 -2,-0.3 -4,-0.0 -3,-0.2 0, 0.0 -0.906 360.0 360.0-111.8 112.3 7.0 10.3 6.0 66 66 A S 0 0 175 -2,-0.6 -2,-0.0 0, 0.0 -1,-0.0 0.048 360.0 360.0 -76.6 360.0 9.0 13.6 6.1