==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE) 23-DEC-96 1GBQ . COMPND 2 MOLECULE: GRB2; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.WITTEKIND,C.MAPELLI,V.LEE,V.GOLDFARB,M.S.FRIEDRICHS, . 67 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4932.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 58.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 29.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 54 0, 0.0 26,-2.1 0, 0.0 2,-0.9 0.000 360.0 360.0 360.0 134.1 7.1 1.5 3.8 2 2 A E E -AB 26 56A 123 54,-1.9 54,-1.3 55,-0.8 2,-0.4 -0.697 360.0-165.3 -78.9 109.6 7.6 0.1 0.3 3 3 A A E -AB 25 55A 0 22,-1.2 22,-2.5 -2,-0.9 2,-0.4 -0.810 7.0-171.2-101.4 135.6 4.2 -1.1 -0.6 4 4 A I E -AB 24 54A 52 50,-1.1 50,-2.8 -2,-0.4 2,-0.3 -0.969 22.0-127.4-136.9 117.8 3.7 -3.5 -3.5 5 5 A A E - B 0 53A 4 18,-2.0 48,-0.3 -2,-0.4 17,-0.2 -0.463 20.3-176.8 -67.2 124.8 0.4 -4.5 -5.0 6 6 A K S S+ 0 0 90 46,-2.2 2,-0.3 -2,-0.3 47,-0.2 0.672 73.0 24.4 -89.4 -24.5 0.0 -8.3 -5.2 7 7 A Y S S- 0 0 79 45,-1.7 2,-0.4 13,-0.1 15,-0.3 -0.891 90.0 -93.2-139.6 166.0 -3.4 -7.9 -6.9 8 8 A D - 0 0 101 -2,-0.3 2,-0.4 13,-0.2 12,-0.2 -0.690 45.1-175.4 -84.5 129.3 -5.4 -5.5 -9.0 9 9 A F B -C 19 0B 18 10,-2.7 10,-2.5 -2,-0.4 2,-0.5 -0.988 18.6-165.3-138.2 131.4 -7.6 -3.3 -6.9 10 10 A K - 0 0 162 -2,-0.4 8,-0.1 8,-0.2 7,-0.1 -0.943 37.1-107.1-109.6 124.4 -10.2 -0.7 -7.8 11 11 A A - 0 0 31 -2,-0.5 7,-0.1 1,-0.1 3,-0.1 -0.009 16.9-158.2 -51.8 158.4 -11.3 1.6 -4.9 12 12 A T S S+ 0 0 98 1,-0.1 2,-0.3 5,-0.1 -1,-0.1 0.451 73.1 26.0-111.3 -13.6 -14.7 1.3 -3.3 13 13 A A S > S- 0 0 26 34,-0.1 3,-0.5 1,-0.0 -1,-0.1 -0.924 81.0-102.5-150.9 170.8 -14.8 4.9 -1.9 14 14 A D T 3 S+ 0 0 171 -2,-0.3 -3,-0.0 1,-0.2 -1,-0.0 0.678 119.3 54.7 -67.3 -25.2 -13.6 8.5 -2.3 15 15 A D T 3 S+ 0 0 64 31,-0.1 32,-1.6 2,-0.0 -1,-0.2 0.678 104.2 69.6 -83.5 -19.6 -11.1 8.0 0.6 16 16 A E B < -d 47 0C 11 -3,-0.5 2,-0.3 30,-0.3 32,-0.2 -0.602 67.6-154.9-100.0 156.6 -9.6 5.0 -1.2 17 17 A L - 0 0 21 30,-1.4 2,-0.1 -2,-0.2 -5,-0.1 -0.943 16.1-110.2-135.4 156.9 -7.5 4.8 -4.4 18 18 A S + 0 0 62 -2,-0.3 2,-0.3 -7,-0.1 -8,-0.2 -0.371 27.2 176.5 -86.1 160.4 -6.8 2.3 -7.1 19 19 A F B -C 9 0B 6 -10,-2.5 -10,-2.7 -2,-0.1 2,-0.3 -0.957 23.9-126.5-159.7 152.2 -3.7 0.3 -8.1 20 20 A K > - 0 0 141 -2,-0.3 3,-2.0 -12,-0.2 2,-0.5 -0.834 49.6 -78.8-107.4 144.7 -2.9 -2.4 -10.6 21 21 A R T 3 S+ 0 0 188 -2,-0.3 -13,-0.2 1,-0.3 -15,-0.2 -0.218 123.3 25.6 -45.8 95.1 -1.3 -5.7 -9.7 22 22 A G T 3 S+ 0 0 47 -2,-0.5 -1,-0.3 -15,-0.3 2,-0.1 0.445 82.2 148.2 124.3 9.0 2.4 -4.6 -9.3 23 23 A D < - 0 0 27 -3,-2.0 -18,-2.0 1,-0.1 2,-0.7 -0.436 45.4-129.0 -76.1 151.4 2.2 -0.9 -8.4 24 24 A I E -A 4 0A 123 -20,-0.2 -20,-0.2 -2,-0.1 2,-0.2 -0.903 33.4-173.0-103.2 115.2 4.9 0.7 -6.1 25 25 A L E -A 3 0A 7 -22,-2.5 -22,-1.2 -2,-0.7 2,-0.5 -0.560 20.8-134.7-103.7 164.5 3.1 2.6 -3.4 26 26 A K E -A 2 0A 119 14,-0.9 2,-0.9 -2,-0.2 14,-0.4 -0.928 13.6-146.7-131.1 111.4 4.4 4.9 -0.7 27 27 A V + 0 0 16 -26,-2.1 12,-0.2 -2,-0.5 3,-0.1 -0.641 27.4 164.5 -88.5 108.8 3.1 4.3 2.8 28 28 A L + 0 0 114 10,-1.3 2,-0.3 -2,-0.9 -1,-0.2 0.711 63.4 15.5 -91.0 -31.2 3.0 7.7 4.5 29 29 A N B +E 38 0C 54 9,-1.6 9,-1.9 -28,-0.1 -1,-0.2 -0.991 44.9 162.2-152.8 158.0 0.7 6.7 7.3 30 30 A E + 0 0 96 -2,-0.3 7,-0.1 7,-0.2 4,-0.1 -0.712 28.5 128.6-173.0 113.7 -0.7 3.8 9.3 31 31 A E S S+ 0 0 150 -2,-0.2 3,-0.1 2,-0.1 6,-0.1 0.125 73.7 25.8-166.0 31.2 -2.2 4.4 12.8 32 32 A C S S+ 0 0 91 1,-0.4 2,-0.3 4,-0.2 5,-0.1 0.116 99.1 54.1-154.1 -84.2 -5.7 2.9 12.9 33 33 A D - 0 0 34 3,-0.3 2,-0.4 1,-0.1 -1,-0.4 -0.562 48.9-157.5 -80.6 133.8 -6.8 0.0 10.8 34 34 A Q S S+ 0 0 154 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 -0.457 101.1 46.8-101.6 51.9 -4.9 -3.2 10.6 35 35 A N S S+ 0 0 56 -2,-0.4 15,-1.7 1,-0.2 2,-0.4 0.221 107.3 56.6-164.8 -23.2 -6.6 -3.7 7.3 36 36 A W E - F 0 49C 9 13,-0.2 -3,-0.3 -3,-0.2 2,-0.3 -0.979 57.0-168.7-137.5 125.8 -6.1 -0.2 5.6 37 37 A Y E - F 0 48C 18 11,-2.5 11,-1.7 -2,-0.4 2,-1.0 -0.823 21.6-135.1-105.0 143.7 -2.9 1.7 4.8 38 38 A K E +EF 29 47C 78 -9,-1.9 -9,-1.6 -2,-0.3 -10,-1.3 -0.808 46.7 155.3-103.2 91.3 -2.8 5.3 3.7 39 39 A A E - F 0 46C 3 7,-1.8 7,-1.7 -2,-1.0 2,-0.4 -0.349 37.2-104.5-106.7-171.2 -0.2 5.2 0.8 40 40 A E E + F 0 45C 83 -14,-0.4 -14,-0.9 5,-0.2 2,-0.3 -0.975 38.5 148.1-131.5 137.5 0.6 7.2 -2.3 41 41 A L E > + F 0 44C 18 3,-2.3 3,-1.6 -2,-0.4 -16,-0.1 -0.948 61.7 3.2-161.6 142.5 0.0 6.6 -6.0 42 42 A N T 3 S- 0 0 136 -2,-0.3 3,-0.1 1,-0.3 -23,-0.0 0.806 125.9 -53.8 54.7 39.1 -0.6 8.5 -9.2 43 43 A G T 3 S+ 0 0 80 1,-0.3 -1,-0.3 0, 0.0 2,-0.3 0.645 124.1 90.9 71.4 16.4 -0.4 12.0 -7.6 44 44 A K E < - F 0 41C 148 -3,-1.6 -3,-2.3 2,-0.0 2,-0.3 -0.835 62.1-145.8-133.9 169.5 -3.0 10.9 -5.0 45 45 A D E + F 0 40C 82 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.996 33.7 130.0-142.1 137.7 -3.1 9.4 -1.5 46 46 A G E - F 0 39C 1 -7,-1.7 -7,-1.8 -2,-0.3 -30,-0.3 -0.984 52.0 -57.5-171.5 178.8 -5.7 7.0 -0.1 47 47 A F E +dF 16 38C 60 -32,-1.6 -30,-1.4 -2,-0.3 -9,-0.2 -0.482 42.3 178.8 -79.9 140.9 -6.6 3.8 1.7 48 48 A I E - F 0 37C 1 -11,-1.7 -11,-2.5 -2,-0.2 2,-0.1 -0.988 32.8-106.2-140.2 141.4 -5.6 0.4 0.3 49 49 A P E > - F 0 36C 0 0, 0.0 3,-0.8 0, 0.0 4,-0.3 -0.457 16.7-139.4 -70.9 140.8 -6.2 -3.1 1.8 50 50 A K G > S+ 0 0 55 -15,-1.7 3,-0.7 1,-0.2 5,-0.1 0.770 101.8 59.2 -72.0 -20.9 -3.3 -4.9 3.5 51 51 A N G 3 S+ 0 0 52 -16,-0.3 -1,-0.2 1,-0.2 -15,-0.1 0.690 99.4 56.7 -80.1 -13.8 -4.4 -8.2 1.9 52 52 A Y G < S+ 0 0 23 -3,-0.8 -46,-2.2 8,-0.1 -45,-1.7 0.505 109.3 53.0 -92.2 -2.1 -4.1 -6.8 -1.6 53 53 A I E < S-B 5 0A 4 -3,-0.7 2,-0.6 -4,-0.3 -48,-0.2 -0.913 73.1-130.9-132.4 158.3 -0.4 -5.9 -1.1 54 54 A E E -B 4 0A 92 -50,-2.8 -50,-1.1 -2,-0.3 2,-0.3 -0.952 34.6-139.7-106.9 116.6 2.9 -7.4 0.1 55 55 A M E +B 3 0A 78 -2,-0.6 -52,-0.2 -52,-0.2 -5,-0.0 -0.586 29.8 169.3 -88.5 144.3 4.5 -5.2 2.7 56 56 A K E B 2 0A 116 -54,-1.3 -54,-1.9 -2,-0.3 -2,-0.0 -0.706 360.0 360.0-153.3 83.7 8.2 -4.4 2.9 57 57 A P 0 0 131 0, 0.0 -55,-0.8 0, 0.0 -1,-0.1 0.869 360.0 360.0 -64.0 360.0 8.7 -1.5 5.4 58 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 59 1 B V 0 0 186 0, 0.0 -52,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 97.7 -8.9 -14.5 -7.9 60 2 B P - 0 0 44 0, 0.0 3,-0.1 0, 0.0 -8,-0.1 -0.106 360.0 -83.9 -55.8 151.8 -7.8 -11.7 -5.4 61 3 B P - 0 0 34 0, 0.0 2,-0.5 0, 0.0 -9,-0.0 0.133 45.2 -91.0 -50.0 162.1 -8.7 -11.8 -1.7 62 4 B P - 0 0 120 0, 0.0 -11,-0.1 0, 0.0 -10,-0.0 -0.703 49.7-121.3 -81.1 122.8 -11.9 -10.7 0.1 63 5 B V - 0 0 56 -2,-0.5 3,-0.1 1,-0.1 -28,-0.0 -0.399 26.5-107.4 -69.1 139.5 -11.4 -7.1 1.0 64 6 B P - 0 0 17 0, 0.0 2,-0.7 0, 0.0 -1,-0.1 -0.176 36.9 -95.6 -63.2 157.4 -11.7 -6.1 4.8 65 7 B P - 0 0 106 0, 0.0 2,-1.7 0, 0.0 0, 0.0 -0.676 34.7-147.7 -76.4 114.3 -14.7 -4.1 6.2 66 8 B R + 0 0 90 -2,-0.7 2,-0.2 -3,-0.1 -33,-0.0 -0.468 66.9 92.1 -89.6 67.3 -13.4 -0.5 6.1 67 9 B R 0 0 220 -2,-1.7 -1,-0.0 1,-0.1 0, 0.0 -0.790 360.0 360.0-160.1 108.5 -15.3 0.8 9.2 68 10 B R 0 0 201 -2,-0.2 -1,-0.1 -35,-0.0 -2,-0.0 0.838 360.0 360.0 -84.1 360.0 -13.7 0.7 12.6