==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JUL-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 26-JUL-12 4GB0 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RNF168; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.Q.ZHANG,C.L.WANG,J.Y.ZANG . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6050.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 62.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 30.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A L 0 0 118 0, 0.0 3,-0.1 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 106.5 -30.2 -10.6 13.1 2 4 A P > - 0 0 96 0, 0.0 3,-0.6 0, 0.0 2,-0.2 0.041 360.0 -75.4 -51.8 166.5 -34.1 -10.1 13.2 3 5 A K T 3 S- 0 0 207 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.508 110.1 -7.3 -80.6 134.8 -35.6 -6.8 14.1 4 6 A D T 3 S+ 0 0 142 -2,-0.2 -1,-0.2 1,-0.2 2,-0.0 0.421 99.3 142.3 58.2 1.3 -35.7 -5.7 17.8 5 7 A A < - 0 0 31 -3,-0.6 -1,-0.2 1,-0.1 0, 0.0 -0.317 60.6-106.5 -61.0 148.0 -34.3 -9.2 18.5 6 8 A I - 0 0 130 -3,-0.1 2,-0.1 -2,-0.0 -1,-0.1 -0.736 33.4-141.1 -82.0 115.7 -31.7 -9.5 21.3 7 9 A P - 0 0 6 0, 0.0 5,-0.1 0, 0.0 -1,-0.0 -0.475 24.1-104.5 -72.8 145.1 -28.2 -10.1 19.9 8 10 A S - 0 0 42 -2,-0.1 4,-0.2 1,-0.1 3,-0.0 -0.298 23.7-121.0 -58.7 151.9 -25.9 -12.6 21.7 9 11 A L S > S+ 0 0 72 1,-0.2 3,-2.0 2,-0.2 4,-0.2 0.915 114.5 59.0 -57.0 -40.3 -23.1 -11.0 23.7 10 12 A S G > S+ 0 0 85 1,-0.3 3,-1.2 2,-0.2 -1,-0.2 0.849 100.0 53.8 -61.8 -36.4 -20.8 -13.0 21.4 11 13 A E G 3 S+ 0 0 131 1,-0.2 -1,-0.3 -3,-0.0 -2,-0.2 0.536 108.3 53.4 -72.8 -5.9 -22.1 -11.4 18.3 12 14 A C G < S+ 0 0 2 -3,-2.0 9,-2.9 -4,-0.2 2,-0.5 0.343 87.6 98.6-111.7 2.2 -21.3 -8.1 19.9 13 15 A Q B < S-A 20 0A 72 -3,-1.2 7,-0.3 7,-0.3 6,-0.1 -0.803 81.8-111.2 -95.5 131.0 -17.7 -8.8 20.8 14 16 A C > - 0 0 1 5,-1.9 4,-1.4 -2,-0.5 19,-0.1 -0.341 23.1-139.4 -51.5 131.3 -14.9 -7.5 18.6 15 17 A G T 4 S+ 0 0 41 17,-0.5 -1,-0.2 1,-0.2 18,-0.1 0.599 95.6 48.7 -75.6 -10.7 -13.3 -10.6 17.0 16 18 A I T 4 S+ 0 0 70 3,-0.1 -1,-0.2 1,-0.0 17,-0.1 0.865 125.9 17.3 -93.8 -44.4 -9.8 -9.2 17.4 17 19 A C T 4 S- 0 0 43 2,-0.1 -2,-0.1 3,-0.0 3,-0.1 0.534 90.0-130.1-108.3 -11.3 -9.5 -8.1 21.0 18 20 A M < + 0 0 117 -4,-1.4 -3,-0.1 1,-0.2 3,-0.1 0.332 66.8 124.4 75.3 -8.2 -12.5 -9.9 22.5 19 21 A E S S- 0 0 101 1,-0.1 -5,-1.9 -6,-0.1 -1,-0.2 -0.195 76.9 -77.1 -67.9 170.3 -13.8 -6.8 24.2 20 22 A I B -A 13 0A 12 -7,-0.3 2,-0.9 65,-0.2 -7,-0.3 -0.421 60.2 -93.5 -64.4 148.1 -17.4 -5.5 23.6 21 23 A L - 0 0 8 -9,-2.9 2,-0.5 -3,-0.1 -1,-0.1 -0.543 45.6-171.3 -72.8 106.2 -17.7 -3.7 20.2 22 24 A V S S- 0 0 27 -2,-0.9 13,-1.8 1,-0.2 3,-0.1 -0.873 70.7 -17.3 -98.0 127.2 -17.2 -0.1 20.8 23 25 A E S S- 0 0 73 -2,-0.5 12,-0.5 11,-0.2 -1,-0.2 0.920 90.6-142.0 44.8 61.2 -17.9 2.1 17.7 24 26 A P E -B 34 0B 0 0, 0.0 47,-2.4 0, 0.0 2,-0.6 -0.164 10.7-150.5 -59.9 139.3 -17.8 -0.8 15.3 25 27 A V E -B 33 0B 0 8,-3.3 8,-1.4 45,-0.2 2,-0.6 -0.958 8.1-159.3-115.2 112.1 -16.2 -0.3 11.9 26 28 A T E -B 32 0B 26 -2,-0.6 6,-0.2 43,-0.5 8,-0.0 -0.862 12.3-146.4 -95.2 120.0 -17.7 -2.6 9.3 27 29 A L > - 0 0 3 4,-3.0 3,-2.1 -2,-0.6 29,-0.0 -0.247 30.9 -98.6 -79.8 168.9 -15.5 -3.0 6.3 28 30 A P T 3 S+ 0 0 41 0, 0.0 -1,-0.1 0, 0.0 28,-0.0 0.716 126.1 59.5 -64.5 -19.3 -16.7 -3.4 2.6 29 31 A C T 3 S- 0 0 27 2,-0.1 3,-0.1 25,-0.1 -3,-0.0 0.491 118.3-116.2 -77.4 -9.5 -16.1 -7.2 3.1 30 32 A N S < S+ 0 0 132 -3,-2.1 2,-0.3 1,-0.4 -4,-0.0 0.526 71.9 133.7 80.5 8.1 -18.7 -7.0 6.0 31 33 A H - 0 0 73 -5,-0.0 -4,-3.0 2,-0.0 -1,-0.4 -0.683 42.3-152.3 -80.7 144.7 -16.2 -8.0 8.6 32 34 A T E +B 26 0B 33 -2,-0.3 -17,-0.5 -6,-0.2 2,-0.3 -0.872 21.4 165.9-122.4 150.2 -16.5 -5.8 11.7 33 35 A L E -B 25 0B 0 -8,-1.4 -8,-3.3 -2,-0.3 2,-0.1 -0.961 41.9 -87.6-156.6 161.0 -14.1 -4.8 14.4 34 36 A C E > -B 24 0B 0 -2,-0.3 4,-3.1 -10,-0.2 -11,-0.2 -0.366 37.4-114.0 -76.3 153.1 -14.0 -2.1 17.0 35 37 A K H > S+ 0 0 52 -13,-1.8 4,-3.4 -12,-0.5 5,-0.3 0.908 115.7 54.3 -51.6 -49.0 -12.6 1.3 16.3 36 38 A P H > S+ 0 0 47 0, 0.0 4,-1.4 0, 0.0 -1,-0.2 0.937 112.8 43.6 -52.2 -50.1 -9.7 0.9 18.6 37 39 A C H >>>S+ 0 0 14 2,-0.2 4,-3.7 1,-0.2 5,-0.6 0.933 112.9 53.1 -59.2 -43.3 -8.7 -2.3 16.8 38 40 A F H 3X>S+ 0 0 0 -4,-3.1 5,-2.5 1,-0.2 4,-2.4 0.961 109.0 49.1 -55.1 -53.3 -9.4 -0.6 13.5 39 41 A Q H 3<5S+ 0 0 84 -4,-3.4 5,-0.4 3,-0.2 -1,-0.2 0.738 123.0 32.1 -58.4 -27.4 -7.0 2.3 14.4 40 42 A S H <<5S+ 0 0 72 -4,-1.4 -2,-0.2 -3,-0.5 -1,-0.2 0.840 126.8 35.4 -96.8 -44.0 -4.2 -0.0 15.5 41 43 A T H <>S+ 0 0 39 -4,-3.7 5,-0.9 -5,-0.2 7,-0.3 0.711 135.4 8.2 -88.2 -20.6 -4.6 -3.1 13.3 42 44 A V I > - 0 0 0 5,-1.6 4,-1.9 -2,-0.3 -17,-0.0 -0.716 28.8-141.3 -71.6 135.7 -9.1 -6.6 6.6 50 52 A P T 4 S+ 0 0 28 0, 0.0 -1,-0.1 0, 0.0 -8,-0.0 0.624 97.4 48.0 -78.8 -12.2 -7.6 -8.7 9.5 51 53 A F T 4 S+ 0 0 89 3,-0.1 -2,-0.0 -20,-0.0 -19,-0.0 0.858 133.5 6.2 -88.5 -40.7 -10.1 -11.4 8.8 52 54 A C T 4 S- 0 0 58 2,-0.1 -1,-0.0 -21,-0.0 0, 0.0 0.462 90.6-118.5-130.4 -6.8 -10.0 -11.8 5.1 53 55 A R < + 0 0 152 -4,-1.9 3,-0.1 1,-0.2 0, 0.0 0.394 50.6 163.7 80.5 -0.0 -7.1 -9.6 3.8 54 56 A R - 0 0 120 -6,-0.1 -5,-1.6 1,-0.1 -1,-0.2 -0.241 44.9-113.6 -45.8 126.9 -9.3 -7.4 1.6 55 57 A R B +C 48 0C 168 -7,-0.2 -7,-0.2 1,-0.1 -8,-0.1 -0.481 42.4 169.9 -67.5 138.8 -7.4 -4.2 0.7 56 58 A V > + 0 0 2 -9,-3.2 4,-3.0 -2,-0.1 -8,-0.2 0.340 37.6 110.0-141.2 5.0 -9.1 -1.3 2.4 57 59 A S H > S+ 0 0 26 -10,-0.7 4,-2.0 1,-0.2 5,-0.1 0.850 86.4 43.7 -54.7 -41.3 -6.9 1.8 2.0 58 60 A S H > S+ 0 0 46 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.901 112.4 53.4 -76.2 -37.2 -9.1 3.6 -0.4 59 61 A W H > S+ 0 0 49 2,-0.2 4,-2.3 1,-0.2 5,-0.3 0.931 108.5 51.1 -54.9 -49.5 -12.2 2.7 1.7 60 62 A T H X S+ 0 0 9 -4,-3.0 4,-3.3 2,-0.2 5,-0.2 0.952 110.2 47.7 -55.5 -57.8 -10.4 4.2 4.7 61 63 A R H X S+ 0 0 130 -4,-2.0 4,-2.4 1,-0.2 5,-0.2 0.935 111.0 53.1 -45.7 -53.6 -9.6 7.5 2.9 62 64 A Y H X S+ 0 0 125 -4,-2.4 4,-0.9 1,-0.2 -1,-0.2 0.921 118.5 32.7 -53.4 -50.0 -13.1 7.8 1.6 63 65 A H H <>S+ 0 0 39 -4,-2.3 5,-2.3 2,-0.2 6,-0.5 0.812 113.3 60.2 -85.9 -28.0 -14.8 7.4 5.0 64 66 A T H ><5S+ 0 0 55 -4,-3.3 3,-2.6 -5,-0.3 -2,-0.2 0.996 106.2 48.2 -53.2 -62.6 -12.2 9.1 7.0 65 67 A R H 3<5S+ 0 0 183 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.787 118.9 40.7 -49.2 -33.0 -12.7 12.3 5.0 66 68 A R T 3<5S- 0 0 129 -4,-0.9 -1,-0.3 -5,-0.2 -2,-0.2 0.272 106.0-122.9-102.0 9.5 -16.4 12.0 5.5 67 69 A N T < 5S+ 0 0 159 -3,-2.6 -3,-0.2 -4,-0.4 -2,-0.1 0.937 77.4 120.3 41.3 57.2 -16.5 10.9 9.2 68 70 A S < + 0 0 50 -5,-2.3 -4,-0.2 1,-0.0 -1,-0.1 0.113 23.7 111.3-133.9 21.2 -18.4 7.8 8.3 69 71 A L + 0 0 17 -6,-0.5 -43,-0.5 -5,-0.1 2,-0.4 0.861 62.6 84.7 -56.8 -36.8 -16.1 5.0 9.4 70 72 A V S S- 0 0 27 -45,-0.2 2,-1.9 -7,-0.1 -45,-0.2 -0.564 80.7-132.1 -81.7 129.9 -18.5 4.0 12.1 71 73 A N >> - 0 0 48 -47,-2.4 4,-2.2 -2,-0.4 3,-1.2 -0.531 27.0-171.2 -73.6 78.9 -21.4 1.6 11.4 72 74 A V H 3> S+ 0 0 101 -2,-1.9 4,-1.8 1,-0.3 -1,-0.2 0.728 77.0 55.5 -49.1 -30.9 -24.0 3.9 13.1 73 75 A E H 3> S+ 0 0 150 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.838 111.4 41.4 -76.6 -37.2 -26.8 1.3 12.9 74 76 A L H <> S+ 0 0 48 -3,-1.2 4,-1.8 2,-0.2 -2,-0.2 0.849 111.5 56.4 -75.1 -39.5 -24.9 -1.5 14.6 75 77 A W H X S+ 0 0 39 -4,-2.2 4,-2.4 1,-0.2 5,-0.2 0.925 106.0 51.7 -57.0 -47.4 -23.5 0.8 17.2 76 78 A T H X S+ 0 0 81 -4,-1.8 4,-1.5 -5,-0.2 -1,-0.2 0.920 109.6 49.2 -54.4 -48.5 -27.0 1.8 18.2 77 79 A I H X S+ 0 0 51 -4,-1.1 4,-1.3 1,-0.2 -1,-0.2 0.809 111.2 49.6 -63.3 -34.5 -28.0 -1.8 18.6 78 80 A I H X S+ 0 0 1 -4,-1.8 4,-2.1 2,-0.2 -1,-0.2 0.900 110.3 49.1 -75.1 -43.2 -25.0 -2.7 20.8 79 81 A Q H < S+ 0 0 85 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.795 109.8 54.6 -61.2 -31.8 -25.5 0.3 23.1 80 82 A K H < S+ 0 0 131 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.857 119.1 28.7 -73.2 -37.6 -29.2 -0.6 23.4 81 83 A H H < S+ 0 0 45 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.662 132.8 30.2-102.7 -18.8 -28.7 -4.2 24.6 82 84 A Y X + 0 0 43 -4,-2.1 4,-1.6 -5,-0.1 -1,-0.2 -0.395 68.2 144.9-134.8 58.8 -25.3 -4.0 26.3 83 85 A P H > S+ 0 0 62 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.893 73.7 52.2 -63.1 -40.3 -25.2 -0.5 27.7 84 86 A R H > S+ 0 0 176 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.948 107.4 51.5 -65.9 -46.3 -23.3 -1.5 30.9 85 87 A E H > S+ 0 0 59 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.855 109.4 52.4 -55.1 -38.4 -20.5 -3.3 28.9 86 88 A C H X S+ 0 0 14 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.882 109.0 47.5 -66.8 -41.9 -20.1 -0.2 26.7 87 89 A K H X S+ 0 0 153 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.854 107.2 57.5 -68.8 -35.6 -19.7 2.1 29.7 88 90 A L H < S+ 0 0 99 -4,-2.4 -1,-0.2 2,-0.2 -2,-0.2 0.830 109.1 45.6 -61.9 -33.9 -17.1 -0.3 31.3 89 91 A R H < S+ 0 0 69 -4,-1.1 -2,-0.2 2,-0.2 -1,-0.2 0.889 108.4 54.9 -78.1 -41.0 -15.0 -0.0 28.1 90 92 A A H < 0 0 89 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.900 360.0 360.0 -50.7 -43.1 -15.3 3.8 28.0 91 93 A S < 0 0 142 -4,-2.1 -2,-0.2 -5,-0.1 -1,-0.2 0.912 360.0 360.0 -64.2 360.0 -14.0 3.7 31.6