==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-APR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LEUCINE ZIPPER 20-OCT-93 1GCL . COMPND 2 MOLECULE: GCN4; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR P.B.HARBURY,T.ZHANG,P.S.KIM,T.ALBER . 124 4 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7451.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 114 91.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 20 16.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 94 75.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 2 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 167 0, 0.0 4,-1.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -12.5 33.1 21.3 38.4 2 2 A M H > + 0 0 48 2,-0.2 4,-1.1 1,-0.2 5,-0.1 0.616 360.0 54.7 -91.4 -16.2 32.2 20.9 34.7 3 3 A K H > S+ 0 0 140 2,-0.2 4,-2.6 3,-0.1 -1,-0.2 0.798 103.4 61.1 -82.7 -28.8 30.5 17.5 35.0 4 4 A Q H 4 S+ 0 0 76 2,-0.2 4,-0.5 1,-0.2 5,-0.2 0.992 102.5 49.5 -52.2 -66.4 28.3 19.3 37.6 5 5 A I H >X S+ 0 0 3 -4,-1.2 4,-2.3 1,-0.2 3,-1.0 0.830 112.5 47.2 -38.3 -50.4 27.1 21.8 35.0 6 6 A E H 3X S+ 0 0 35 -4,-1.1 4,-2.1 1,-0.3 -1,-0.2 0.964 106.1 55.9 -66.4 -47.6 26.2 19.0 32.6 7 7 A D H 3X S+ 0 0 71 -4,-2.6 4,-0.6 1,-0.2 -1,-0.3 0.485 110.9 48.3 -65.2 1.8 24.4 16.8 35.1 8 8 A K H <> S+ 0 0 50 -3,-1.0 4,-2.7 -4,-0.5 5,-0.3 0.734 104.3 55.2-105.3 -42.3 22.2 19.8 35.7 9 9 A L H X S+ 0 0 2 -4,-2.3 4,-2.7 1,-0.2 -2,-0.2 0.837 109.9 51.2 -58.2 -27.1 21.5 20.6 32.1 10 10 A E H X S+ 0 0 78 -4,-2.1 4,-3.2 2,-0.2 5,-0.3 0.941 107.8 49.2 -72.7 -47.6 20.3 17.0 32.0 11 11 A E H X S+ 0 0 84 -4,-0.6 4,-0.9 2,-0.2 -2,-0.2 0.797 116.0 45.5 -66.4 -23.2 18.0 17.4 35.1 12 12 A I H >X S+ 0 0 2 -4,-2.7 4,-1.8 2,-0.2 3,-1.1 0.970 111.1 54.0 -75.7 -50.4 16.7 20.5 33.3 13 13 A L H 3X S+ 0 0 0 -4,-2.7 4,-0.8 1,-0.3 -2,-0.2 0.808 108.1 48.6 -47.2 -48.3 16.5 18.5 30.2 14 14 A S H 3X S+ 0 0 53 -4,-3.2 4,-1.8 2,-0.2 -1,-0.3 0.775 107.6 53.4 -65.6 -34.1 14.4 15.8 31.7 15 15 A K H X S+ 0 0 74 -4,-1.8 4,-2.5 1,-0.2 3,-0.8 0.875 108.4 61.7 -70.8 -33.7 7.8 15.8 31.3 19 19 A I H 3X S+ 0 0 4 -4,-1.7 4,-2.0 1,-0.3 -1,-0.2 0.917 97.4 57.4 -59.2 -40.5 6.6 19.2 30.6 20 20 A E H 3< S+ 0 0 29 -4,-1.4 4,-0.5 1,-0.2 -1,-0.3 0.810 109.3 47.1 -57.5 -34.3 6.0 18.3 27.0 21 21 A N H XX S+ 0 0 87 -4,-0.8 4,-1.8 -3,-0.8 3,-1.0 0.906 104.8 55.6 -75.6 -51.3 3.7 15.6 28.2 22 22 A E H >X S+ 0 0 5 -4,-2.5 4,-2.6 1,-0.3 3,-0.6 0.949 112.8 45.7 -46.1 -47.9 1.6 17.5 30.7 23 23 A L H 3X S+ 0 0 3 -4,-2.0 4,-0.8 1,-0.2 -1,-0.3 0.632 109.0 52.2 -71.4 -22.1 0.8 19.9 27.9 24 24 A A H <> S+ 0 0 44 -3,-1.0 4,-1.4 -4,-0.5 -1,-0.2 0.662 113.9 46.4 -86.3 -21.6 0.0 17.3 25.2 25 25 A R H < S+ 0 0 40 -4,-0.8 3,-1.2 -5,-0.3 -2,-0.2 0.976 110.5 37.2 -65.8 -48.7 -3.9 19.6 25.0 28 28 A K H >< S+ 0 0 163 -4,-1.4 3,-1.2 1,-0.3 -1,-0.2 0.828 99.7 74.7 -71.0 -35.6 -6.1 16.7 24.4 29 29 A L T 3< S+ 0 0 85 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.532 108.4 34.1 -55.3 -11.5 -8.3 17.1 27.4 30 30 A L T < 0 0 52 -3,-1.2 -1,-0.3 -4,-0.4 -2,-0.1 -0.487 360.0 360.0-133.1 55.3 -9.9 20.1 25.5 31 31 A G < 0 0 98 -3,-1.2 94,-0.0 0, 0.0 -4,-0.0 -0.936 360.0 360.0 146.8 360.0 -10.0 19.1 21.8 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 1 B R > 0 0 121 0, 0.0 4,-2.5 0, 0.0 5,-0.3 0.000 360.0 360.0 360.0 -53.3 31.7 32.5 35.5 34 2 B M H > + 0 0 64 1,-0.2 4,-1.5 2,-0.2 3,-0.2 0.840 360.0 34.7 -39.0 -61.9 31.7 29.3 37.6 35 3 B K H 4 S+ 0 0 154 1,-0.2 -1,-0.2 2,-0.2 5,-0.1 0.961 117.8 56.8 -61.3 -46.0 29.6 30.6 40.5 36 4 B Q H >4 S+ 0 0 114 1,-0.2 3,-0.9 2,-0.2 4,-0.4 0.752 105.7 47.5 -55.0 -37.6 27.5 32.7 38.0 37 5 B I H >X S+ 0 0 0 -4,-2.5 4,-2.3 1,-0.3 3,-1.6 0.954 113.8 47.6 -71.4 -46.2 26.5 29.7 35.8 38 6 B E T 3< S+ 0 0 30 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 -0.150 103.7 63.6 -86.9 34.4 25.5 27.7 38.7 39 7 B D T <4 S+ 0 0 75 -3,-0.9 -1,-0.3 -2,-0.3 -2,-0.2 0.378 111.5 36.9-120.0 -23.9 23.6 30.8 40.0 40 8 B K T X> S+ 0 0 59 -3,-1.6 4,-1.6 -4,-0.4 3,-1.4 0.730 108.4 59.3 -96.4 -43.9 21.3 30.6 37.1 41 9 B L H >X S+ 0 0 0 -4,-2.3 4,-2.5 1,-0.3 3,-0.5 0.942 107.9 48.2 -53.4 -49.6 21.0 26.8 36.5 42 10 B E H 3> S+ 0 0 97 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.469 108.7 55.5 -72.7 -0.7 19.5 26.4 40.0 43 11 B E H <> S+ 0 0 81 -3,-1.4 4,-1.3 2,-0.2 -1,-0.2 0.662 110.0 44.8 -96.4 -26.3 17.2 29.4 39.2 44 12 B I H X S+ 0 0 15 -4,-2.5 4,-2.0 -5,-0.2 3,-1.0 0.998 109.8 43.6 -59.4 -65.5 15.8 24.4 38.5 46 14 B S H 3X S+ 0 0 53 -4,-1.0 4,-1.6 1,-0.3 3,-0.3 0.889 114.2 52.8 -39.1 -51.6 13.6 26.1 40.9 47 15 B K H 3X S+ 0 0 31 -4,-1.3 4,-2.0 1,-0.3 -1,-0.3 0.740 104.5 53.4 -64.9 -35.1 11.5 27.6 38.0 48 16 B L H X S+ 0 0 98 -4,-1.8 3,-1.2 1,-0.2 4,-1.2 0.975 107.4 56.1 -60.8 -49.9 3.6 22.6 39.8 54 22 B E H 3X S+ 0 0 28 -4,-3.2 4,-1.4 1,-0.3 -2,-0.2 0.674 105.8 51.8 -54.6 -27.4 1.4 25.0 37.7 55 23 B L H 3X S+ 0 0 2 -4,-0.9 4,-1.0 2,-0.2 -1,-0.3 0.808 96.8 64.4 -86.0 -25.8 0.6 22.3 35.3 56 24 B A H XX S+ 0 0 27 -4,-1.2 4,-2.0 -3,-1.2 3,-0.6 0.942 106.9 46.7 -52.1 -49.4 -0.4 19.8 38.0 57 25 B R H 3X S+ 0 0 86 -4,-1.2 4,-3.2 1,-0.2 5,-0.3 0.906 103.8 58.3 -56.4 -53.5 -3.3 22.3 38.7 58 26 B I H 3X S+ 0 0 4 -4,-1.4 4,-1.3 2,-0.2 -1,-0.2 0.720 109.7 49.9 -54.7 -23.7 -4.3 22.8 35.1 59 27 B K H 0 0 176 0, 0.0 4,-1.6 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 -53.9 32.8 29.6 25.3 66 2 C M H > + 0 0 24 2,-0.3 4,-2.4 1,-0.2 5,-0.1 0.833 360.0 46.6 -69.5 -44.9 31.9 30.0 28.9 67 3 C K H > S+ 0 0 147 2,-0.2 4,-0.8 1,-0.2 -1,-0.2 0.741 114.0 51.5 -67.7 -28.8 30.5 33.6 28.6 68 4 C Q H > S+ 0 0 128 2,-0.2 4,-1.6 1,-0.2 -2,-0.3 0.790 110.2 50.4 -74.0 -32.7 28.7 32.2 25.5 69 5 C I H X S+ 0 0 4 -4,-1.6 4,-1.3 2,-0.2 -2,-0.2 0.936 110.3 45.7 -65.9 -50.1 27.5 29.4 27.8 70 6 C E H < S+ 0 0 11 -4,-2.4 4,-0.4 1,-0.2 -1,-0.2 0.665 109.7 59.2 -70.4 -19.1 26.2 31.8 30.5 71 7 C D H >X S+ 0 0 90 -4,-0.8 4,-2.0 2,-0.2 3,-0.9 0.906 103.2 48.0 -75.8 -47.3 24.5 33.9 27.8 72 8 C K H 3X S+ 0 0 58 -4,-1.6 4,-2.8 1,-0.3 -2,-0.2 0.870 109.9 55.4 -59.1 -36.5 22.3 31.1 26.4 73 9 C L H 3X S+ 0 0 4 -4,-1.3 4,-1.0 2,-0.2 -1,-0.3 0.646 103.8 52.2 -68.0 -24.7 21.3 30.4 30.0 74 10 C E H <> S+ 0 0 101 -3,-0.9 4,-0.5 -4,-0.4 -2,-0.2 0.848 112.2 49.7 -78.4 -30.7 20.2 34.0 30.4 75 11 C E H >X S+ 0 0 79 -4,-2.0 4,-1.7 1,-0.2 3,-1.2 0.922 110.1 46.8 -61.9 -57.0 18.2 33.3 27.3 76 12 C I H 3X S+ 0 0 2 -4,-2.8 4,-1.4 1,-0.3 -1,-0.2 0.829 107.4 60.2 -58.3 -32.9 16.7 30.1 28.7 77 13 C L H 3< S+ 0 0 18 -4,-1.0 -1,-0.3 1,-0.2 -2,-0.2 0.708 105.8 45.9 -71.8 -17.1 15.9 32.0 31.8 78 14 C S H S+ 0 0 113 -4,-0.5 4,-0.6 -3,-0.4 -2,-0.2 0.854 110.6 46.8 -67.9 -41.2 3.2 34.6 31.9 86 22 C E H X S+ 0 0 11 -4,-1.4 4,-2.4 2,-0.3 3,-0.3 0.839 105.5 52.8 -77.0 -30.1 1.3 32.2 29.7 87 23 C L H X S+ 0 0 1 -4,-1.7 4,-0.6 1,-0.3 -1,-0.2 0.545 105.9 62.3 -79.6 0.4 0.1 29.8 32.3 88 24 C A H > S+ 0 0 42 2,-0.1 4,-0.6 -5,-0.1 -1,-0.3 0.807 105.4 41.2 -90.8 -32.7 -1.1 33.0 33.7 89 25 C R H >X S+ 0 0 114 -4,-0.6 3,-2.4 -3,-0.3 4,-2.3 0.976 109.2 58.6 -73.5 -54.1 -3.3 33.7 30.7 90 26 C I H 3X S+ 0 0 3 -4,-2.4 4,-1.0 1,-0.3 -1,-0.1 0.785 103.0 56.0 -34.9 -45.5 -4.6 30.0 30.5 91 27 C K H 3< S+ 0 0 107 -4,-0.6 -1,-0.3 2,-0.2 -2,-0.2 0.826 109.2 45.6 -62.4 -35.4 -5.8 30.4 34.1 92 28 C K H X< S+ 0 0 151 -3,-2.4 3,-3.1 -4,-0.6 -2,-0.2 0.981 111.6 51.2 -68.2 -59.3 -7.8 33.3 33.0 93 29 C L H 3< S+ 0 0 55 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.2 0.653 114.2 45.5 -50.1 -19.0 -9.1 31.5 29.9 94 30 C L T 3< 0 0 45 -4,-1.0 -1,-0.3 -5,-0.3 -2,-0.2 0.133 360.0 360.0-114.7 9.4 -10.1 28.6 32.1 95 31 C G < 0 0 97 -3,-3.1 -3,-0.2 -5,-0.1 -2,-0.1 0.431 360.0 360.0 86.5 360.0 -11.8 30.5 35.0 96 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 97 1 D R 0 0 201 0, 0.0 4,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -28.3 34.0 16.9 28.2 98 2 D M > + 0 0 43 2,-0.2 4,-1.0 3,-0.1 5,-0.2 0.564 360.0 69.1-115.4 -24.0 32.5 20.4 27.0 99 3 D K H > S+ 0 0 171 1,-0.2 4,-1.2 2,-0.2 3,-0.2 0.839 98.5 64.5 -65.9 -26.0 30.9 20.3 23.4 100 4 D Q H >> S+ 0 0 76 1,-0.2 4,-2.3 2,-0.2 3,-0.9 0.964 95.5 57.7 -57.2 -47.2 28.4 18.2 25.3 101 5 D I H 3> S+ 0 0 1 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.784 111.2 37.3 -52.3 -43.4 27.5 21.2 27.4 102 6 D E H 3X S+ 0 0 39 -4,-1.0 4,-1.8 2,-0.2 -1,-0.3 0.614 114.5 60.4 -88.8 -9.1 26.5 23.4 24.5 103 7 D D H < S+ 0 0 143 -4,-2.7 3,-1.2 3,-0.3 -1,-0.2 0.927 106.3 56.2 -59.7 -52.8 -5.9 28.9 20.8 125 29 D L H 3< S+ 0 0 78 -4,-3.1 -1,-0.2 1,-0.3 -2,-0.2 0.892 117.1 39.6 -46.0 -44.4 -7.7 25.7 21.9 126 30 D L H 3< 0 0 42 -4,-2.2 -1,-0.3 -5,-0.2 -2,-0.3 0.533 360.0 360.0 -83.7 -13.8 -9.0 28.0 24.7 127 31 D G << 0 0 65 -3,-1.2 -3,-0.3 -4,-1.0 -2,-0.2 0.492 360.0 360.0 151.1 360.0 -9.6 31.2 22.7