==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 25-APR-95 1GCM . COMPND 2 MOLECULE: GCN4P-II; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR P.B.HARBURY,P.S.KIM,T.ALBER . 96 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6645.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 84 87.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 78 81.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 138 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -58.1 13.8 5.7 -8.0 2 2 A M H > + 0 0 35 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.853 360.0 55.4 -54.0 -29.4 16.9 5.1 -10.0 3 3 A K H > S+ 0 0 118 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.931 108.7 43.5 -69.8 -49.6 18.0 8.6 -9.4 4 4 A Q H > S+ 0 0 114 2,-0.2 4,-2.8 1,-0.2 5,-0.3 0.953 109.9 60.5 -62.1 -43.1 17.8 8.4 -5.6 5 5 A I H X S+ 0 0 7 -4,-2.8 4,-2.2 1,-0.3 -2,-0.2 0.933 107.2 43.8 -50.3 -45.9 19.5 5.0 -5.8 6 6 A E H X S+ 0 0 58 -4,-2.2 4,-1.9 1,-0.2 -1,-0.3 0.867 112.2 52.6 -68.2 -36.3 22.5 6.5 -7.4 7 7 A D H X S+ 0 0 71 -4,-1.9 4,-1.6 2,-0.2 -1,-0.2 0.907 109.1 49.1 -64.6 -44.1 22.5 9.3 -5.0 8 8 A K H X S+ 0 0 84 -4,-2.8 4,-1.8 1,-0.2 -2,-0.2 0.797 108.1 56.7 -62.8 -32.8 22.4 6.8 -2.1 9 9 A I H X S+ 0 0 7 -4,-2.2 4,-1.6 -5,-0.3 -1,-0.2 0.920 104.0 50.1 -66.7 -41.9 25.2 5.0 -3.7 10 10 A E H X S+ 0 0 112 -4,-1.9 4,-1.4 1,-0.2 -2,-0.2 0.897 110.4 52.8 -62.2 -37.6 27.5 8.1 -3.8 11 11 A E H X S+ 0 0 129 -4,-1.6 4,-1.3 1,-0.2 -1,-0.2 0.903 109.1 49.5 -62.2 -40.0 26.6 8.5 -0.1 12 12 A I H X S+ 0 0 5 -4,-1.8 4,-2.3 1,-0.3 -1,-0.2 0.809 103.9 57.4 -70.7 -35.9 27.7 5.0 0.6 13 13 A L H X S+ 0 0 54 -4,-1.6 4,-1.6 1,-0.2 -1,-0.3 0.888 107.5 47.7 -66.2 -39.4 30.8 5.3 -1.1 14 14 A S H X S+ 0 0 88 -4,-1.4 4,-1.6 2,-0.2 -1,-0.2 0.800 108.1 56.2 -69.4 -34.2 31.8 8.2 1.1 15 15 A K H X S+ 0 0 96 -4,-1.3 4,-2.2 1,-0.2 5,-0.2 0.941 109.2 46.9 -62.3 -49.3 30.8 6.2 4.3 16 16 A I H X S+ 0 0 5 -4,-2.3 4,-2.0 2,-0.2 5,-0.2 0.884 107.0 55.3 -55.0 -50.5 33.1 3.4 3.4 17 17 A Y H X S+ 0 0 163 -4,-1.6 4,-0.9 1,-0.2 -1,-0.2 0.933 108.4 50.6 -63.6 -31.9 36.0 5.7 2.6 18 18 A H H >X S+ 0 0 74 -4,-1.6 4,-1.8 1,-0.2 3,-0.9 0.947 108.4 51.2 -64.0 -54.2 35.7 7.1 6.1 19 19 A I H 3X S+ 0 0 0 -4,-2.2 4,-2.2 1,-0.3 -1,-0.2 0.834 105.7 55.7 -53.3 -36.6 35.6 3.7 7.7 20 20 A E H 3X S+ 0 0 53 -4,-2.0 4,-2.0 -5,-0.2 -1,-0.3 0.813 106.5 51.4 -71.3 -20.1 38.8 2.7 5.9 21 21 A N H X S+ 0 0 119 -4,-1.8 4,-1.8 1,-0.2 3,-1.7 0.944 108.6 53.5 -65.8 -54.8 44.4 4.6 12.0 26 26 A I H 3< S+ 0 0 5 -4,-2.9 4,-0.5 1,-0.3 -1,-0.2 0.799 103.1 60.3 -57.3 -27.0 43.4 1.9 14.5 27 27 A K H 3< S+ 0 0 71 -4,-1.7 3,-0.5 -5,-0.2 -1,-0.3 0.827 101.9 50.6 -75.0 -26.9 46.0 -0.2 12.9 28 28 A K H << S+ 0 0 171 -3,-1.7 -2,-0.2 -4,-0.7 -1,-0.2 0.864 105.6 57.7 -74.9 -34.3 48.7 2.2 13.8 29 29 A L S < S+ 0 0 127 -4,-1.8 -1,-0.2 0, 0.0 -2,-0.2 0.572 115.0 32.8 -70.0 -13.0 47.6 2.3 17.4 30 30 A I 0 0 45 -4,-0.5 -3,-0.1 -3,-0.5 -2,-0.0 0.316 360.0 360.0-114.2-123.3 48.0 -1.4 17.9 31 31 A G 0 0 93 60,-0.1 -1,-0.2 -2,-0.0 60,-0.0 0.521 360.0 360.0 -96.0 360.0 50.4 -4.1 16.5 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 1 B R > 0 0 157 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -41.6 15.0 -6.5 -10.8 34 2 B M H > + 0 0 38 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.945 360.0 52.1 -76.7 -44.6 14.4 -3.2 -9.1 35 3 B K H > S+ 0 0 150 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.821 108.7 52.7 -58.4 -38.3 13.1 -4.7 -5.8 36 4 B Q H > S+ 0 0 108 2,-0.2 4,-2.6 3,-0.1 -1,-0.2 0.936 107.0 52.2 -59.7 -54.5 16.3 -6.8 -5.7 37 5 B I H X S+ 0 0 5 -4,-1.7 4,-1.9 1,-0.2 3,-0.3 0.962 111.5 47.5 -43.8 -58.6 18.4 -3.7 -6.2 38 6 B E H X S+ 0 0 65 -4,-2.4 4,-2.1 1,-0.3 -1,-0.2 0.834 108.5 52.6 -52.4 -43.9 16.6 -2.1 -3.3 39 7 B D H X S+ 0 0 96 -4,-2.0 4,-1.7 1,-0.2 -1,-0.3 0.927 107.1 55.2 -62.3 -39.0 17.0 -5.1 -1.0 40 8 B K H X S+ 0 0 59 -4,-2.6 4,-2.1 -3,-0.3 -2,-0.2 0.928 106.3 50.7 -56.2 -45.1 20.7 -5.0 -1.8 41 9 B I H X S+ 0 0 17 -4,-1.9 4,-2.4 1,-0.2 -1,-0.2 0.906 106.8 51.2 -65.5 -42.4 20.8 -1.4 -0.6 42 10 B E H X S+ 0 0 124 -4,-2.1 4,-2.4 1,-0.2 -1,-0.2 0.880 109.8 54.5 -64.0 -29.1 19.1 -2.0 2.7 43 11 B E H X S+ 0 0 76 -4,-1.7 4,-2.2 2,-0.2 -1,-0.2 0.909 106.1 48.2 -65.5 -52.1 21.6 -4.7 3.2 44 12 B I H X S+ 0 0 1 -4,-2.1 4,-2.4 1,-0.2 5,-0.2 0.952 112.7 51.4 -53.8 -46.5 24.6 -2.5 2.6 45 13 B L H X S+ 0 0 58 -4,-2.4 4,-1.8 2,-0.2 -2,-0.2 0.901 109.1 49.4 -54.9 -47.7 23.0 -0.0 5.1 46 14 B S H X S+ 0 0 65 -4,-2.4 4,-1.8 1,-0.2 -1,-0.2 0.960 113.6 45.2 -64.7 -46.0 22.5 -2.6 7.8 47 15 B K H X S+ 0 0 59 -4,-2.2 4,-2.4 2,-0.2 -1,-0.2 0.850 108.6 55.4 -64.4 -43.0 26.0 -3.9 7.6 48 16 B I H X S+ 0 0 13 -4,-2.4 4,-2.8 2,-0.2 5,-0.2 0.926 108.6 50.0 -55.7 -40.7 27.6 -0.4 7.5 49 17 B Y H X S+ 0 0 154 -4,-1.8 4,-1.5 1,-0.2 -2,-0.2 0.884 108.9 51.3 -64.7 -39.6 25.8 0.3 10.7 50 18 B H H X S+ 0 0 89 -4,-1.8 4,-2.1 2,-0.2 -1,-0.2 0.914 110.1 49.8 -60.9 -51.1 27.1 -2.9 12.2 51 19 B I H X S+ 0 0 1 -4,-2.4 4,-2.4 2,-0.2 5,-0.2 0.931 106.5 53.8 -57.1 -47.9 30.6 -2.0 11.2 52 20 B E H X S+ 0 0 45 -4,-2.8 4,-1.2 1,-0.2 -1,-0.2 0.835 110.2 50.2 -60.8 -29.6 30.3 1.5 12.7 53 21 B N H X S+ 0 0 77 -4,-1.5 4,-2.0 -5,-0.2 -1,-0.2 0.948 108.8 49.3 -71.6 -48.5 29.2 -0.1 16.0 54 22 B E H X S+ 0 0 29 -4,-2.1 4,-1.4 1,-0.2 3,-0.3 0.964 110.0 52.3 -51.2 -58.5 32.1 -2.6 16.1 55 23 B I H X S+ 0 0 2 -4,-2.4 4,-1.3 1,-0.3 -1,-0.2 0.840 107.4 54.5 -49.2 -35.2 34.6 0.2 15.4 56 24 B A H X S+ 0 0 55 -4,-1.2 4,-1.9 -5,-0.2 -1,-0.3 0.911 108.4 45.6 -63.9 -55.3 33.1 2.1 18.4 57 25 B R H X S+ 0 0 126 -4,-2.0 4,-1.7 -3,-0.3 -1,-0.2 0.716 108.9 58.5 -60.4 -25.1 33.6 -0.7 20.8 58 26 B I H X S+ 0 0 2 -4,-1.4 4,-1.5 -5,-0.2 -1,-0.2 0.788 105.9 48.3 -76.2 -29.6 37.1 -1.1 19.5 59 27 B K H >X S+ 0 0 71 -4,-1.3 4,-1.1 -3,-0.2 3,-0.7 0.988 110.3 50.3 -71.2 -57.0 38.0 2.4 20.3 60 28 B K H >< S+ 0 0 112 -4,-1.9 3,-0.9 1,-0.3 -2,-0.2 0.881 112.9 47.9 -38.3 -61.1 36.6 2.2 23.9 61 29 B L H 3< S+ 0 0 80 -4,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.794 120.1 37.0 -52.7 -42.5 38.6 -1.1 24.4 62 30 B I H << S+ 0 0 54 -4,-1.5 -1,-0.2 -3,-0.7 2,-0.2 0.329 131.9 10.1 -95.5 6.7 41.8 0.5 23.0 63 31 B G << 0 0 45 -4,-1.1 -4,-0.0 -3,-0.9 0, 0.0 -0.786 360.0 360.0-160.5-167.7 41.2 3.9 24.6 64 32 B E 0 0 137 -2,-0.2 -1,-0.2 -3,-0.0 -2,-0.1 0.047 360.0 360.0 -40.3 360.0 39.0 5.9 27.0 65 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 66 1 C R > 0 0 170 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -51.7 21.6 2.2 -16.4 67 2 C M H > + 0 0 58 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.836 360.0 52.0 -71.8 -29.5 20.3 -0.7 -14.3 68 3 C K H > S+ 0 0 104 2,-0.2 4,-2.7 3,-0.2 -1,-0.2 0.787 104.7 53.0 -75.8 -39.2 23.5 -2.7 -15.0 69 4 C Q H > S+ 0 0 133 2,-0.2 4,-2.0 1,-0.2 3,-0.3 0.997 109.3 51.4 -63.0 -50.2 25.9 -0.1 -14.0 70 5 C I H X S+ 0 0 4 -4,-1.7 4,-2.0 1,-0.3 -2,-0.2 0.856 110.8 48.2 -49.7 -44.5 24.0 0.2 -10.7 71 6 C E H X S+ 0 0 24 -4,-1.6 4,-2.0 1,-0.2 -1,-0.3 0.902 109.5 53.0 -67.3 -35.6 24.3 -3.6 -10.2 72 7 C D H X S+ 0 0 66 -4,-2.7 4,-1.1 -3,-0.3 -1,-0.2 0.872 110.5 46.0 -66.7 -39.5 27.9 -3.5 -11.0 73 8 C K H X S+ 0 0 67 -4,-2.0 4,-2.3 2,-0.2 -1,-0.2 0.847 108.2 57.0 -72.7 -34.6 28.6 -0.8 -8.5 74 9 C I H X S+ 0 0 2 -4,-2.0 4,-2.0 -5,-0.2 5,-0.2 0.900 107.3 48.9 -65.6 -36.9 26.5 -2.6 -5.8 75 10 C E H X S+ 0 0 98 -4,-2.0 4,-1.3 2,-0.2 -1,-0.2 0.889 108.8 53.3 -69.8 -35.1 28.6 -5.7 -6.1 76 11 C E H X S+ 0 0 107 -4,-1.1 4,-1.8 1,-0.2 -2,-0.2 0.918 108.8 50.5 -65.7 -39.8 31.8 -3.6 -5.8 77 12 C I H X S+ 0 0 3 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.912 108.1 50.5 -61.0 -47.1 30.4 -2.2 -2.7 78 13 C L H X S+ 0 0 37 -4,-2.0 4,-1.4 1,-0.2 -1,-0.2 0.779 110.0 53.4 -66.6 -24.0 29.7 -5.7 -1.1 79 14 C S H X S+ 0 0 81 -4,-1.3 4,-1.4 2,-0.2 -1,-0.2 0.882 109.5 45.3 -74.2 -46.1 33.2 -6.7 -2.0 80 15 C K H X S+ 0 0 92 -4,-1.8 4,-1.8 2,-0.2 -2,-0.2 0.879 111.8 53.7 -61.6 -46.2 34.8 -3.8 -0.2 81 16 C I H X S+ 0 0 2 -4,-2.1 4,-1.6 1,-0.2 -2,-0.2 0.853 105.7 52.2 -63.0 -36.9 32.5 -4.3 2.7 82 17 C Y H X S+ 0 0 148 -4,-1.4 4,-1.2 1,-0.2 -1,-0.2 0.837 108.2 52.6 -61.4 -48.5 33.5 -8.0 3.0 83 18 C H H X S+ 0 0 96 -4,-1.4 4,-1.9 2,-0.2 -2,-0.2 0.875 108.4 49.0 -55.5 -44.6 37.2 -7.0 3.1 84 19 C I H X S+ 0 0 1 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.845 107.9 56.1 -66.0 -36.5 36.6 -4.5 6.0 85 20 C E H X S+ 0 0 55 -4,-1.6 4,-1.5 1,-0.2 -1,-0.2 0.829 107.8 46.8 -69.2 -32.4 34.7 -7.1 7.9 86 21 C N H X S+ 0 0 77 -4,-1.2 4,-1.6 2,-0.2 5,-0.2 0.896 110.8 53.7 -71.4 -43.6 37.7 -9.4 7.7 87 22 C E H X S+ 0 0 39 -4,-1.9 4,-1.9 1,-0.2 -2,-0.2 0.909 108.7 49.2 -54.7 -47.6 40.0 -6.5 8.7 88 23 C I H X S+ 0 0 1 -4,-2.5 4,-3.0 1,-0.2 5,-0.2 0.901 106.7 56.5 -57.3 -41.6 37.8 -5.9 11.8 89 24 C A H X S+ 0 0 43 -4,-1.5 4,-0.8 1,-0.2 -1,-0.2 0.828 109.3 45.0 -61.3 -37.8 38.0 -9.6 12.7 90 25 C R H X S+ 0 0 184 -4,-1.6 4,-2.5 2,-0.2 -1,-0.2 0.821 111.3 52.7 -78.7 -33.2 41.7 -9.6 12.8 91 26 C I H X S+ 0 0 5 -4,-1.9 4,-1.3 -5,-0.2 6,-0.2 0.993 106.9 53.0 -67.5 -47.4 41.8 -6.4 14.7 92 27 C K H <>S+ 0 0 64 -4,-3.0 5,-3.2 1,-0.2 -1,-0.2 0.778 111.3 47.3 -50.6 -35.3 39.5 -7.9 17.3 93 28 C K H ><5S+ 0 0 154 -4,-0.8 3,-3.2 -5,-0.2 -1,-0.2 0.988 104.9 59.6 -69.6 -58.2 41.8 -10.8 17.6 94 29 C L H 3<5S+ 0 0 101 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.631 113.5 36.6 -42.1 -30.5 44.9 -8.6 17.9 95 30 C I T 3<5S- 0 0 49 -4,-1.3 -1,-0.3 -5,-0.1 -2,-0.2 0.088 117.9-106.1-112.8 11.9 43.5 -6.9 21.0 96 31 C G T < 5 + 0 0 62 -3,-3.2 2,-0.4 1,-0.2 -3,-0.2 0.744 58.7 162.4 70.2 27.6 41.9 -9.9 22.5 97 32 C E < 0 0 22 -5,-3.2 -1,-0.2 -6,-0.2 -2,-0.1 -0.612 360.0 360.0 -79.6 130.5 38.3 -9.0 21.8 98 33 C R 0 0 140 -2,-0.4 -1,-0.2 0, 0.0 -5,-0.1 -0.205 360.0 360.0-176.0 360.0 36.2 -12.2 22.1