==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 23-MAR-06 2GFR . COMPND 2 MOLECULE: UPEROLEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A DIKE,S.M.COWSIK . 11 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1387.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 54.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X 0 0 139 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.2 1.5 -0.0 -0.0 2 2 A P + 0 0 142 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.443 360.0 117.6 -75.0 0.3 4.0 -2.7 -0.9 3 3 A D > - 0 0 99 1,-0.1 4,-1.1 2,-0.0 5,-0.0 -0.417 66.4-141.3 -70.0 143.7 3.5 -3.9 2.7 4 4 A P H > S+ 0 0 95 0, 0.0 4,-0.8 0, 0.0 -1,-0.1 0.773 102.4 54.6 -75.0 -28.0 2.1 -7.5 3.1 5 5 A N H >4 S+ 0 0 142 2,-0.2 3,-0.6 1,-0.2 4,-0.5 0.928 114.8 37.7 -69.9 -47.2 0.0 -6.4 6.0 6 6 A A H >> S+ 0 0 32 1,-0.2 4,-0.7 2,-0.2 3,-0.6 0.722 107.1 69.1 -75.3 -22.6 -1.6 -3.6 4.1 7 7 A F H 3< S+ 0 0 140 -4,-1.1 3,-0.3 1,-0.2 -1,-0.2 0.769 93.9 56.8 -65.5 -26.8 -1.6 -5.8 1.0 8 8 A Y T X< S+ 0 0 189 -4,-0.8 3,-0.9 -3,-0.6 -1,-0.2 0.756 99.8 58.3 -75.1 -26.3 -4.2 -8.0 2.8 9 9 A G T <4 S+ 0 0 62 -3,-0.6 -1,-0.2 -4,-0.5 -2,-0.2 0.702 86.2 77.4 -75.1 -21.1 -6.5 -4.9 3.2 10 10 A L T 3< 0 0 152 -4,-0.7 -1,-0.2 -3,-0.3 -2,-0.2 0.745 360.0 360.0 -59.4 -23.0 -6.5 -4.5 -0.6 11 11 A M < 0 0 195 -3,-0.9 -3,-0.0 -4,-0.2 -1,-0.0 -0.707 360.0 360.0 -84.1 360.0 -8.9 -7.4 -0.5