==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 11-JAN-01 1GHT . COMPND 2 MOLECULE: TRANSPOSON GAMMA-DELTA RESOLVASE; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR B.PAN,G.P.MULLEN . 105 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7109.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 67.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 12 11.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 22.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 148 0, 0.0 2,-0.3 0, 0.0 58,-0.2 0.000 360.0 360.0 360.0 141.2 -2.4 13.7 5.2 2 2 A R - 0 0 89 54,-0.1 58,-1.9 56,-0.1 2,-0.9 -0.931 360.0-110.1-146.6 169.7 -4.5 10.7 6.3 3 3 A L E +a 60 0A 61 -2,-0.3 26,-1.8 56,-0.1 2,-0.2 -0.706 40.2 179.1-107.1 83.5 -4.1 6.9 7.0 4 4 A F E -a 61 0A 9 56,-1.5 58,-3.0 -2,-0.9 2,-0.4 -0.582 8.6-161.7 -82.8 145.0 -6.1 5.2 4.2 5 5 A G E -ab 62 33A 0 27,-1.8 29,-1.5 -2,-0.2 2,-0.4 -0.985 7.9-148.5-132.2 129.3 -6.1 1.4 4.2 6 6 A Y E +ab 63 34A 14 56,-1.8 58,-0.8 -2,-0.4 2,-0.3 -0.771 23.9 175.6 -95.0 136.3 -7.0 -1.0 1.3 7 7 A A - 0 0 1 27,-1.7 2,-0.3 -2,-0.4 40,-0.2 -0.962 14.7-177.4-138.9 158.1 -8.7 -4.3 2.2 8 8 A R - 0 0 46 -2,-0.3 2,-0.2 27,-0.3 29,-0.2 -0.948 23.3-129.9-155.8 130.3 -10.2 -7.3 0.3 9 9 A V + 0 0 7 27,-2.4 29,-0.2 -2,-0.3 3,-0.0 -0.598 26.0 169.6 -85.4 145.7 -11.8 -10.4 1.8 10 10 A S + 0 0 62 -2,-0.2 -1,-0.1 28,-0.1 2,-0.1 0.656 61.8 61.0-120.5 -39.5 -10.8 -13.9 0.6 11 11 A T S S- 0 0 70 1,-0.1 4,-0.3 28,-0.0 5,-0.1 -0.348 80.0-125.6 -85.1 171.1 -12.5 -16.3 3.0 12 12 A S S S+ 0 0 110 2,-0.1 -1,-0.1 1,-0.1 -3,-0.0 -0.353 91.6 66.5-114.1 53.6 -16.3 -16.5 3.5 13 13 A Q S S- 0 0 160 -2,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.545 123.1 -43.9-133.1 -57.5 -16.6 -15.9 7.2 14 14 A Q S > S+ 0 0 103 2,-0.0 4,-2.3 3,-0.0 3,-0.4 0.059 73.1 145.6-174.7 40.7 -15.6 -12.4 8.2 15 15 A S H > S+ 0 0 4 -4,-0.3 4,-3.6 1,-0.2 5,-0.2 0.859 74.9 61.5 -58.4 -33.7 -12.4 -11.5 6.3 16 16 A L H > S+ 0 0 50 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.934 107.3 43.9 -60.6 -42.3 -13.6 -7.9 6.1 17 17 A D H > S+ 0 0 83 -3,-0.4 4,-2.3 2,-0.2 5,-0.2 0.964 116.8 45.3 -66.8 -49.3 -13.6 -7.7 9.9 18 18 A I H X S+ 0 0 85 -4,-2.3 4,-1.4 2,-0.2 -2,-0.2 0.900 114.3 50.7 -61.1 -38.7 -10.2 -9.5 10.1 19 19 A Q H >X S+ 0 0 7 -4,-3.6 4,-2.6 -5,-0.2 3,-0.6 0.979 108.3 50.3 -64.5 -53.9 -8.8 -7.3 7.3 20 20 A V H 3X S+ 0 0 21 -4,-2.8 4,-3.4 1,-0.3 5,-0.3 0.940 110.3 50.3 -50.2 -49.4 -10.0 -4.0 9.0 21 21 A R H 3X S+ 0 0 168 -4,-2.3 4,-2.4 1,-0.2 -1,-0.3 0.864 110.2 52.6 -58.5 -31.5 -8.3 -5.0 12.2 22 22 A A H S+ 0 0 1 -4,-2.6 4,-1.9 2,-0.2 5,-1.0 0.939 115.7 47.8 -70.4 -44.5 -5.3 -2.2 8.5 24 24 A K H <5S+ 0 0 72 -4,-3.4 3,-0.2 3,-0.2 -2,-0.2 0.948 111.3 50.2 -61.7 -45.4 -6.0 -0.6 11.9 25 25 A D H <5S+ 0 0 152 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.882 110.3 52.0 -59.8 -34.2 -3.1 -2.6 13.5 26 26 A A H <5S- 0 0 32 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.842 135.7 -88.7 -70.6 -32.8 -1.0 -1.4 10.6 27 27 A G T <5S+ 0 0 28 -4,-1.9 2,-0.4 -3,-0.2 -3,-0.2 0.632 79.5 138.8 124.6 45.9 -2.0 2.2 11.3 28 28 A V < - 0 0 8 -5,-1.0 2,-0.3 -4,-0.2 -1,-0.2 -0.918 50.7-120.4-119.6 145.8 -5.2 2.8 9.4 29 29 A K > - 0 0 112 -26,-1.8 3,-0.9 -2,-0.4 -24,-0.2 -0.625 14.7-134.9 -84.0 140.6 -8.3 4.7 10.5 30 30 A A G > S+ 0 0 58 -2,-0.3 3,-0.6 1,-0.3 -1,-0.1 0.869 107.5 61.0 -62.7 -32.9 -11.6 2.7 10.5 31 31 A N G 3 S+ 0 0 152 1,-0.3 2,-0.5 3,-0.0 -1,-0.3 0.808 106.1 48.9 -64.4 -26.2 -13.3 5.7 8.9 32 32 A R G < S+ 0 0 51 -3,-0.9 -27,-1.8 -29,-0.2 2,-0.6 -0.517 74.1 132.0-112.4 65.6 -10.9 5.2 5.9 33 33 A I E < -b 5 0A 29 -3,-0.6 2,-2.1 -2,-0.5 -27,-0.2 -0.763 30.9-175.7-117.5 87.5 -11.2 1.5 5.2 34 34 A F E +b 6 0A 39 -29,-1.5 -27,-1.7 -2,-0.6 14,-0.1 -0.488 23.8 169.0 -81.4 74.8 -11.7 0.9 1.5 35 35 A T - 0 0 32 -2,-2.1 2,-0.4 -29,-0.2 -27,-0.3 -0.182 30.0-132.9 -78.9 178.1 -12.2 -2.9 1.8 36 36 A D - 0 0 3 10,-0.1 2,-3.2 9,-0.1 -27,-2.4 -0.893 1.4-149.0-138.6 107.3 -13.4 -5.1 -1.1 37 37 A K + 0 0 119 -2,-0.4 8,-0.1 1,-0.2 -29,-0.1 -0.313 32.1 162.8 -72.4 65.6 -16.2 -7.7 -0.4 38 38 A A + 0 0 29 -2,-3.2 2,-3.2 1,-0.2 -1,-0.2 0.774 52.7 92.1 -57.6 -22.8 -14.7 -10.0 -3.1 39 39 A S S S+ 0 0 53 -3,-0.3 -1,-0.2 -28,-0.1 2,-0.2 -0.320 75.1 81.5 -71.8 66.5 -16.9 -12.8 -1.4 40 40 A G S S- 0 0 51 -2,-3.2 -2,-0.1 2,-0.3 3,-0.1 -0.608 106.8 -54.2-144.5-154.5 -19.8 -12.1 -3.8 41 41 A S S S- 0 0 132 -2,-0.2 2,-0.3 1,-0.1 -3,-0.1 0.869 119.0 -13.6 -63.8 -33.3 -20.9 -13.0 -7.3 42 42 A S S S- 0 0 90 0, 0.0 -2,-0.3 0, 0.0 2,-0.2 -0.877 100.9 -50.0-153.0-175.6 -17.6 -11.7 -8.6 43 43 A S - 0 0 79 -2,-0.3 2,-1.0 1,-0.1 -5,-0.1 -0.474 44.4-151.1 -67.2 128.0 -14.5 -9.6 -7.6 44 44 A D > + 0 0 62 -2,-0.2 2,-2.5 -8,-0.1 3,-0.6 -0.543 20.8 174.7 -99.8 69.4 -15.7 -6.3 -6.0 45 45 A R T 3 + 0 0 89 -2,-1.0 -9,-0.1 1,-0.2 -2,-0.1 -0.417 38.6 117.1 -75.0 74.1 -12.7 -4.1 -6.9 46 46 A K T 3> + 0 0 128 -2,-2.5 4,-2.2 -11,-0.2 5,-0.3 0.618 55.7 71.8-112.9 -21.3 -14.2 -0.9 -5.5 47 47 A G H X> S+ 0 0 1 -3,-0.6 4,-3.2 2,-0.2 3,-0.6 0.996 110.2 28.9 -59.3 -68.3 -11.7 -0.1 -2.7 48 48 A L H 3> S+ 0 0 28 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.853 116.2 64.8 -62.7 -30.4 -8.8 1.0 -4.9 49 49 A D H 34 S+ 0 0 90 1,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.911 116.4 27.5 -59.5 -39.2 -11.4 2.1 -7.5 50 50 A L H XX S+ 0 0 61 -4,-2.2 3,-1.1 -3,-0.6 4,-0.6 0.765 115.1 64.4 -92.0 -28.7 -12.6 4.8 -5.1 51 51 A L H >X S+ 0 0 1 -4,-3.2 4,-2.3 -5,-0.3 3,-1.0 0.890 94.2 61.4 -62.1 -36.4 -9.2 5.1 -3.3 52 52 A R H 3< S+ 0 0 87 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.784 115.8 33.3 -61.5 -23.6 -7.7 6.4 -6.5 53 53 A M H <4 S+ 0 0 134 -3,-1.1 -1,-0.3 -5,-0.2 -2,-0.2 0.347 120.0 50.5-112.8 4.2 -10.2 9.3 -6.2 54 54 A K H << S+ 0 0 121 -3,-1.0 -3,-0.2 -4,-0.6 -2,-0.2 0.657 82.0 99.6-113.2 -25.1 -10.3 9.6 -2.4 55 55 A V < - 0 0 11 -4,-2.3 2,-0.2 -5,-0.2 33,-0.0 -0.311 66.0-138.0 -62.6 146.2 -6.6 9.7 -1.5 56 56 A E > - 0 0 91 1,-0.1 3,-1.7 -54,-0.1 2,-0.6 -0.595 35.1 -77.5-102.0 167.0 -5.3 13.3 -0.8 57 57 A E T 3 S+ 0 0 173 1,-0.3 31,-0.2 -2,-0.2 30,-0.2 -0.483 123.9 13.2 -66.0 111.2 -2.0 14.8 -1.9 58 58 A G T 3 S+ 0 0 39 29,-1.2 -1,-0.3 -2,-0.6 30,-0.2 0.721 94.2 147.0 95.3 24.5 0.6 13.3 0.5 59 59 A D < - 0 0 0 -3,-1.7 30,-3.1 -58,-0.2 2,-0.5 -0.584 44.8-128.5 -91.3 157.1 -1.7 10.6 1.9 60 60 A V E -ac 3 89A 22 -58,-1.9 -56,-1.5 -2,-0.2 2,-0.8 -0.904 12.3-156.7-108.7 126.7 -0.4 7.1 3.0 61 61 A I E -a 4 0A 0 28,-2.5 2,-0.5 -2,-0.5 -56,-0.2 -0.824 9.5-158.2-103.5 99.8 -2.1 4.0 1.6 62 62 A L E -a 5 0A 14 -58,-3.0 -56,-1.8 -2,-0.8 2,-0.4 -0.644 10.5-166.0 -79.0 121.8 -1.5 1.1 4.1 63 63 A V E -ad 6 92A 6 28,-2.5 30,-2.0 -2,-0.5 31,-0.3 -0.888 6.4-146.8-110.9 139.7 -1.9 -2.2 2.3 64 64 A K - 0 0 58 -58,-0.8 2,-0.6 -2,-0.4 3,-0.2 -0.615 11.5-131.8 -99.7 162.8 -2.3 -5.6 4.1 65 65 A K + 0 0 110 -2,-0.2 27,-0.0 1,-0.1 -2,-0.0 -0.743 56.4 127.2-116.4 85.5 -1.0 -9.0 2.8 66 66 A L S S- 0 0 72 -2,-0.6 -1,-0.1 -58,-0.1 -59,-0.0 0.735 90.9 -20.7-106.5 -33.9 -3.8 -11.5 3.2 67 67 A D S S- 0 0 84 -3,-0.2 2,-0.2 -59,-0.0 -2,-0.1 0.386 105.2 -58.9-138.1 -76.0 -4.0 -13.0 -0.4 68 68 A R - 0 0 166 1,-0.2 -3,-0.1 -4,-0.1 -4,-0.0 -0.818 28.0-126.5 179.8 138.6 -2.5 -10.8 -3.2 69 69 A L S S- 0 0 34 -2,-0.2 -1,-0.2 2,-0.1 -4,-0.0 0.992 93.0 -14.0 -57.0 -66.5 -3.0 -7.4 -4.8 70 70 A G - 0 0 10 1,-0.1 4,-0.1 2,-0.1 3,-0.0 0.263 63.9-142.6-108.7-125.2 -3.5 -8.5 -8.4 71 71 A R S S- 0 0 191 2,-0.7 -1,-0.1 -2,-0.0 -2,-0.1 0.069 75.7 -11.4-171.8 -59.5 -2.7 -12.0 -9.9 72 72 A D S S+ 0 0 131 1,-0.0 -2,-0.1 0, 0.0 0, 0.0 0.627 115.0 60.9-124.0 -65.6 -1.3 -11.9 -13.5 73 73 A T S S- 0 0 110 1,-0.2 2,-2.7 2,-0.0 -2,-0.7 -0.098 103.9 -87.9 -60.8 167.8 -1.6 -8.4 -15.1 74 74 A A S > S+ 0 0 56 1,-0.2 4,-0.8 2,-0.1 -1,-0.2 -0.316 82.0 132.2 -76.7 62.1 0.2 -5.5 -13.5 75 75 A D H > + 0 0 50 -2,-2.7 4,-1.3 2,-0.2 5,-0.3 0.949 69.4 49.4 -78.8 -50.8 -2.8 -4.7 -11.2 76 76 A M H 4 S+ 0 0 73 -3,-0.5 4,-0.4 1,-0.3 -1,-0.1 0.874 118.3 42.2 -56.2 -35.3 -0.8 -4.4 -7.9 77 77 A I H > S+ 0 0 63 -4,-0.1 4,-2.5 2,-0.1 -1,-0.3 0.712 104.8 68.8 -85.0 -20.2 1.6 -2.1 -9.8 78 78 A Q H >X S+ 0 0 78 -4,-0.8 4,-2.4 -3,-0.3 3,-0.5 0.999 105.0 36.4 -61.6 -69.2 -1.3 -0.2 -11.6 79 79 A L H 3X S+ 0 0 12 -4,-1.3 4,-1.8 1,-0.2 -1,-0.2 0.741 116.0 59.6 -58.2 -17.4 -2.8 1.5 -8.5 80 80 A I H 3> S+ 0 0 4 -4,-0.4 4,-2.5 -5,-0.3 -1,-0.2 0.924 107.6 42.3 -77.4 -42.3 0.8 1.9 -7.3 81 81 A K H S+ 0 0 1 -4,-1.8 5,-2.5 -5,-0.2 4,-0.3 0.870 110.8 59.4 -76.3 -35.5 -0.8 6.8 -6.5 84 84 A D H ><5S+ 0 0 92 -4,-2.5 3,-0.7 1,-0.2 -1,-0.2 0.880 109.8 43.8 -60.8 -35.2 2.9 7.4 -7.1 85 85 A A H 3<5S+ 0 0 86 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.755 106.4 61.1 -81.4 -23.8 2.0 10.1 -9.7 86 86 A Q T 3<5S- 0 0 79 -4,-1.0 -28,-0.3 -5,-0.1 -1,-0.2 0.418 117.9-109.5 -82.8 4.9 -0.7 11.6 -7.4 87 87 A G T < 5S+ 0 0 45 -3,-0.7 -29,-1.2 -4,-0.3 2,-0.3 0.829 78.3 132.1 73.1 28.6 1.9 12.4 -4.8 88 88 A V < - 0 0 7 -5,-2.5 -1,-0.3 -30,-0.2 2,-0.2 -0.868 47.4-141.6-114.4 148.8 0.5 9.7 -2.5 89 89 A S B -c 60 0A 63 -30,-3.1 -28,-2.5 -2,-0.3 2,-0.4 -0.647 3.1-149.6-104.4 164.7 2.5 7.0 -0.6 90 90 A I - 0 0 7 -30,-0.3 9,-0.2 -2,-0.2 -28,-0.2 -0.883 10.2-155.3-137.4 105.1 1.5 3.3 -0.0 91 91 A R - 0 0 130 -2,-0.4 -28,-2.5 -30,-0.2 2,-0.5 -0.435 8.1-148.9 -77.6 153.8 2.8 1.6 3.1 92 92 A F B >> -d 63 0A 33 5,-0.7 4,-2.6 -30,-0.2 3,-1.8 -0.964 13.7-153.6-128.9 120.0 3.2 -2.2 3.1 93 93 A I T 34 S+ 0 0 76 -30,-2.0 -29,-0.1 -2,-0.5 -1,-0.1 0.775 94.0 73.8 -60.4 -22.5 2.7 -4.3 6.3 94 94 A D T 34 S- 0 0 113 -31,-0.3 -1,-0.3 1,-0.1 -30,-0.1 0.803 128.1 -7.8 -62.9 -26.3 5.0 -6.9 4.6 95 95 A D T <4 S- 0 0 131 -3,-1.8 -2,-0.2 2,-0.3 -1,-0.1 0.544 93.1-110.6-137.2 -44.0 8.0 -4.5 5.3 96 96 A G S < S+ 0 0 39 -4,-2.6 2,-0.2 1,-0.6 -3,-0.1 0.052 89.9 69.0 127.6 -24.7 6.7 -1.2 6.7 97 97 A I S S- 0 0 93 -5,-0.2 -5,-0.7 1,-0.2 -1,-0.6 -0.524 84.9 -95.8-113.5-176.4 7.6 1.1 3.8 98 98 A S - 0 0 39 -7,-0.2 2,-2.7 -2,-0.2 -1,-0.2 -0.113 64.5 -60.3 -88.1-168.5 6.2 1.4 0.2 99 99 A T + 0 0 44 -9,-0.2 2,-3.1 1,-0.1 3,-0.3 -0.402 58.5 178.9 -74.4 72.0 7.5 -0.2 -3.0 100 100 A D S S+ 0 0 152 -2,-2.7 -1,-0.1 1,-0.2 -3,-0.0 -0.329 72.2 37.6 -73.7 65.3 10.9 1.6 -2.7 101 101 A G + 0 0 64 -2,-3.1 -1,-0.2 1,-0.1 2,-0.2 0.240 66.2 134.3 152.3 70.1 12.2 -0.2 -5.9 102 102 A E + 0 0 47 -3,-0.3 2,-0.3 2,-0.0 -1,-0.1 -0.603 35.6 114.5-136.7 75.5 9.7 -0.6 -8.8 103 103 A M S S- 0 0 160 -2,-0.2 2,-0.7 0, 0.0 0, 0.0 -0.834 74.1-103.3-135.1 174.4 11.3 0.4 -12.1 104 104 A G 0 0 86 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.296 360.0 360.0 -95.8 51.6 12.3 -1.3 -15.4 105 105 A K 0 0 227 -2,-0.7 -1,-0.2 0, 0.0 -3,-0.0 0.975 360.0 360.0 -62.8 360.0 16.0 -1.4 -14.5