==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 17-JUN-98 1GIW . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; . AUTHOR L.BANCI,I.BERTINI,J.G.HUBER,G.A.SPYROULIAS,P.TURANO . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7011.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 54.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 59 0, 0.0 2,-0.3 0, 0.0 92,-0.2 0.000 360.0 360.0 360.0-148.4 -11.1 10.6 4.8 2 2 A D > - 0 0 91 1,-0.1 4,-2.7 87,-0.1 95,-0.4 -0.733 360.0-145.8 -98.9 139.9 -8.4 13.1 5.8 3 3 A V H > S+ 0 0 51 -2,-0.3 4,-2.7 2,-0.2 -1,-0.1 0.907 102.4 43.3 -69.3 -41.3 -5.0 13.2 4.1 4 4 A E H > S+ 0 0 91 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.933 114.6 48.8 -72.7 -48.0 -3.1 14.1 7.3 5 5 A K H > S+ 0 0 124 2,-0.2 4,-2.9 1,-0.2 5,-0.4 0.947 111.7 53.3 -54.0 -46.8 -5.0 11.6 9.4 6 6 A G H X S+ 0 0 0 -4,-2.7 4,-3.2 87,-0.3 -2,-0.2 0.948 111.5 43.0 -50.9 -56.8 -4.2 9.1 6.6 7 7 A K H X S+ 0 0 63 -4,-2.7 4,-2.6 1,-0.2 -1,-0.2 0.873 116.9 47.3 -64.9 -35.8 -0.5 9.9 6.7 8 8 A K H X S+ 0 0 139 -4,-2.9 4,-2.6 2,-0.2 -1,-0.2 0.945 117.6 40.3 -64.8 -51.7 -0.4 9.8 10.6 9 9 A I H X S+ 0 0 25 -4,-2.9 4,-1.8 2,-0.2 -2,-0.2 0.900 114.6 54.1 -73.1 -41.1 -2.3 6.6 11.0 10 10 A F H >X>S+ 0 0 3 -4,-3.2 4,-2.8 -5,-0.4 3,-1.1 0.984 110.9 45.2 -45.1 -66.6 -0.5 5.1 8.0 11 11 A V H 3<5S+ 0 0 61 -4,-2.6 5,-0.4 1,-0.3 -2,-0.2 0.879 109.2 58.6 -52.9 -41.2 2.8 5.9 9.7 12 12 A Q H 3<5S+ 0 0 156 -4,-2.6 -1,-0.3 1,-0.2 -2,-0.2 0.859 128.6 9.1 -53.9 -43.7 1.5 4.6 13.0 13 13 A K H <<5S+ 0 0 69 -4,-1.8 -2,-0.2 -3,-1.1 -1,-0.2 0.357 135.0 38.8-124.4 2.8 0.7 1.1 11.6 14 14 A C T >X5S+ 0 0 15 -4,-2.8 3,-2.4 -5,-0.2 4,-2.1 0.678 95.5 71.3-123.4 -45.4 2.3 0.8 8.1 15 15 A A T 34 > + 0 0 59 6,-0.5 2,-1.8 -2,-0.3 5,-0.8 -0.257 18.4 165.4 -80.6 62.4 8.8 3.9 5.1 20 20 A V T 3 5 + 0 0 11 -2,-2.4 -1,-0.1 1,-0.2 -9,-0.1 -0.586 42.2 97.6 -74.7 83.1 7.3 6.0 2.2 21 21 A E T 3 5S- 0 0 139 -2,-1.8 -1,-0.2 -6,-0.1 -2,-0.1 0.341 106.5 -45.0-137.8 -11.5 8.6 9.4 3.3 22 22 A K T < 5S- 0 0 160 -3,-0.6 -2,-0.1 0, 0.0 -3,-0.0 0.103 116.1 -18.9-179.1 -54.3 11.7 9.9 1.1 23 23 A G T 5S+ 0 0 56 -4,-0.4 -3,-0.1 2,-0.0 -4,-0.0 -0.184 76.1 144.6 164.0 57.6 14.0 6.9 0.9 24 24 A G < - 0 0 31 -5,-0.8 2,-0.3 1,-0.2 -4,-0.1 0.493 54.0 -86.5 -77.6-126.8 13.4 4.5 3.7 25 25 A K - 0 0 153 1,-0.3 -6,-0.5 4,-0.1 -1,-0.2 -0.847 14.4-127.1-132.7 175.0 13.9 0.8 2.8 26 26 A H + 0 0 87 -2,-0.3 -1,-0.3 4,-0.2 -7,-0.3 0.580 53.1 137.2 -76.1-112.9 11.9 -2.0 1.3 27 27 A K S S- 0 0 174 1,-0.2 -2,-0.1 -9,-0.1 0, 0.0 0.991 88.9 -11.1 70.0 70.4 12.4 -4.8 3.9 28 28 A T S S+ 0 0 94 -10,-0.0 -1,-0.2 52,-0.0 -10,-0.1 0.448 144.0 36.5 86.5 10.4 9.0 -6.5 4.4 29 29 A G S S- 0 0 4 51,-0.1 -10,-0.3 -13,-0.1 2,-0.3 -0.699 87.4-119.5-179.6 124.1 7.1 -3.8 2.5 30 30 A P - 0 0 31 0, 0.0 2,-0.3 0, 0.0 -4,-0.2 -0.590 39.5-104.5 -70.1 136.4 8.3 -1.9 -0.6 31 31 A N - 0 0 27 -2,-0.3 2,-2.8 1,-0.1 -5,-0.1 -0.522 36.1-121.5 -61.2 124.5 8.5 1.8 0.1 32 32 A L + 0 0 23 -2,-0.3 2,-2.5 1,-0.1 3,-0.4 -0.285 45.4 169.9 -75.0 57.5 5.3 3.0 -1.8 33 33 A H S S- 0 0 126 -2,-2.8 -1,-0.1 1,-0.3 69,-0.1 -0.375 71.4 -20.3 -78.6 65.3 7.3 5.3 -4.0 34 34 A G S S+ 0 0 11 -2,-2.5 -1,-0.3 64,-0.1 68,-0.1 0.819 70.0 165.7 96.3 90.0 4.5 6.2 -6.5 35 35 A L > + 0 0 21 -3,-0.4 3,-2.4 63,-0.3 2,-0.3 0.888 51.3 86.1 -92.1 -60.4 1.6 3.7 -6.6 36 36 A F T 3 S+ 0 0 45 1,-0.3 23,-0.2 62,-0.3 24,-0.2 -0.274 112.0 1.3 -57.1 106.0 -1.2 5.6 -8.5 37 37 A G T 3 S+ 0 0 58 21,-1.8 2,-0.5 -2,-0.3 -1,-0.3 0.129 99.1 122.3 102.4 -18.2 -0.6 4.9 -12.2 38 38 A R < - 0 0 142 -3,-2.4 2,-0.4 21,-0.2 -1,-0.3 -0.689 69.1-118.6 -81.9 121.3 2.5 2.7 -11.7 39 39 A K - 0 0 150 -2,-0.5 19,-0.3 19,-0.2 3,-0.2 -0.451 32.9-144.7 -59.4 113.9 2.1 -0.8 -13.3 40 40 A T S S+ 0 0 9 17,-1.9 13,-0.1 -2,-0.4 -1,-0.1 -0.144 72.2 63.9 -65.5 169.8 2.4 -3.3 -10.4 41 41 A G S S+ 0 0 12 15,-0.1 -1,-0.2 14,-0.1 2,-0.1 0.605 93.6 71.0 92.4 13.3 3.9 -6.8 -10.7 42 42 A Q + 0 0 144 -3,-0.2 5,-0.1 4,-0.1 6,-0.0 -0.560 51.2 168.3-168.0 83.3 7.4 -5.5 -11.5 43 43 A A - 0 0 25 -2,-0.1 2,-2.4 2,-0.1 -3,-0.0 -0.905 40.7-121.2-105.6 134.3 9.6 -3.7 -8.8 44 44 A P S S- 0 0 144 0, 0.0 2,-0.1 0, 0.0 3,-0.0 -0.360 95.4 -2.5 -79.3 67.7 13.3 -3.1 -9.7 45 45 A G S S+ 0 0 72 -2,-2.4 2,-0.6 0, 0.0 -2,-0.1 -0.510 134.7 33.7 159.6 -75.2 14.9 -5.1 -6.9 46 46 A F + 0 0 71 -2,-0.1 -4,-0.1 1,-0.1 0, 0.0 -0.948 61.4 174.6-108.7 108.1 12.4 -6.6 -4.4 47 47 A T - 0 0 36 -2,-0.6 6,-0.2 1,-0.3 -1,-0.1 -0.309 33.7-129.9-119.3 49.6 9.3 -7.6 -6.3 48 48 A Y - 0 0 53 4,-0.1 -1,-0.3 5,-0.1 2,-0.1 0.267 52.2 -21.6 56.1-171.0 7.2 -9.3 -3.6 49 49 A T >> - 0 0 32 1,-0.1 4,-3.0 4,-0.0 3,-0.7 -0.486 61.9-116.9 -63.6 151.0 5.5 -12.7 -3.7 50 50 A D H 3> S+ 0 0 127 2,-0.2 4,-3.2 1,-0.2 5,-0.2 0.848 116.2 65.3 -53.4 -40.0 4.7 -14.2 -7.1 51 51 A A H 34 S+ 0 0 28 26,-0.3 -1,-0.2 1,-0.2 27,-0.1 0.879 113.9 30.9 -53.7 -39.2 1.0 -13.9 -6.1 52 52 A N H X> S+ 0 0 9 -3,-0.7 3,-1.6 25,-0.2 4,-0.5 0.841 116.8 57.6 -85.6 -37.5 1.4 -10.1 -6.1 53 53 A K H >< S+ 0 0 113 -4,-3.0 3,-0.5 1,-0.3 -2,-0.2 0.878 107.0 50.1 -58.7 -38.9 4.1 -10.1 -8.9 54 54 A N T 3< S+ 0 0 142 -4,-3.2 -1,-0.3 1,-0.2 -2,-0.2 0.567 88.4 88.4 -73.6 -14.1 1.6 -11.9 -11.1 55 55 A K T <4 - 0 0 72 -3,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.875 62.8-173.1 -63.9 -43.3 -1.1 -9.2 -10.2 56 56 A G << + 0 0 56 -4,-0.5 -15,-0.1 -3,-0.5 -1,-0.1 0.780 31.7 136.0 55.7 37.5 -0.2 -6.8 -13.1 57 57 A I - 0 0 28 -19,-0.1 -17,-1.9 -18,-0.0 -1,-0.1 -0.039 62.4-118.6 -92.9-160.8 -2.5 -4.0 -12.0 58 58 A T - 0 0 54 -19,-0.3 -21,-1.8 -2,-0.1 -20,-0.2 -0.162 42.1-114.4-138.1 34.5 -1.7 -0.2 -11.7 59 59 A W + 0 0 25 -23,-0.2 -21,-0.2 -22,-0.1 2,-0.1 0.751 58.0 166.1 15.4 68.9 -2.3 0.3 -8.0 60 60 A K > - 0 0 88 -24,-0.2 4,-2.7 -23,-0.1 2,-1.5 -0.446 55.3 -85.0 -94.8 174.7 -5.3 2.6 -8.5 61 61 A E T 4 S+ 0 0 97 1,-0.2 -1,-0.1 2,-0.2 -2,-0.0 -0.055 126.7 49.2 -75.7 38.6 -7.9 3.8 -6.0 62 62 A E T > S+ 0 0 117 -2,-1.5 4,-2.6 3,-0.1 -1,-0.2 0.414 111.6 42.5-133.8 -57.7 -10.0 0.6 -6.6 63 63 A T H > S+ 0 0 14 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.890 114.3 54.1 -62.8 -41.6 -7.3 -2.1 -6.2 64 64 A L H X S+ 0 0 4 -4,-2.7 4,-2.8 2,-0.2 5,-0.3 0.929 109.5 47.8 -60.3 -46.2 -5.9 -0.1 -3.2 65 65 A M H > S+ 0 0 46 -5,-0.3 4,-2.5 2,-0.2 5,-0.2 0.960 114.0 45.2 -55.4 -56.1 -9.4 -0.1 -1.5 66 66 A E H X S+ 0 0 103 -4,-2.6 4,-2.5 2,-0.2 8,-0.3 0.919 117.0 46.4 -58.8 -43.6 -10.0 -3.9 -2.1 67 67 A Y H < S+ 0 0 21 -4,-2.7 -2,-0.2 2,-0.2 -1,-0.2 0.978 113.6 45.2 -61.7 -60.6 -6.5 -4.7 -0.9 68 68 A L H < S+ 0 0 17 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.826 115.7 49.5 -59.7 -31.8 -6.4 -2.6 2.2 69 69 A E H < S- 0 0 105 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.951 139.4 -2.2 -64.0 -51.3 -9.9 -3.9 3.1 70 70 A N S >X S+ 0 0 69 -4,-2.5 4,-2.8 -5,-0.2 3,-0.9 -0.571 70.2 170.6-146.8 72.5 -9.0 -7.5 2.6 71 71 A P H 3> S+ 0 0 0 0, 0.0 4,-2.5 0, 0.0 7,-0.2 0.894 79.8 51.7 -69.1 -43.4 -5.4 -8.0 1.4 72 72 A K H 34 S+ 0 0 134 10,-0.4 5,-0.3 2,-0.2 6,-0.1 0.772 115.3 45.3 -56.5 -31.3 -5.2 -11.8 1.8 73 73 A K H <4 S+ 0 0 154 -3,-0.9 -1,-0.2 -6,-0.2 -6,-0.1 0.946 110.7 50.4 -79.2 -51.9 -8.4 -12.0 -0.3 74 74 A Y H < S+ 0 0 21 -4,-2.8 -2,-0.2 -8,-0.3 -1,-0.1 0.860 128.9 23.8 -50.1 -43.0 -7.4 -9.5 -3.0 75 75 A I S >< S- 0 0 0 -4,-2.5 2,-2.3 -5,-0.2 3,-1.6 -0.933 84.8-140.3-126.6 106.5 -4.1 -11.5 -3.4 76 76 A P T 3 S+ 0 0 110 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 -0.415 93.8 11.5 -72.5 78.2 -4.4 -15.1 -2.2 77 77 A G T 3 S+ 0 0 44 -2,-2.3 -26,-0.3 -5,-0.3 -25,-0.2 0.642 78.9 165.9 119.6 38.0 -0.9 -15.3 -0.5 78 78 A T < - 0 0 18 -3,-1.6 -1,-0.1 -7,-0.2 -28,-0.0 -0.419 41.5-132.3 -59.1 149.7 0.5 -11.8 -0.2 79 79 A K S S+ 0 0 141 -2,-0.1 2,-0.3 2,-0.1 -1,-0.1 0.445 76.1 115.0 -82.9 -2.9 3.4 -11.6 2.2 80 80 A M - 0 0 38 1,-0.1 2,-0.9 -9,-0.1 -2,-0.1 -0.547 62.3-147.9 -67.9 131.2 1.6 -8.6 3.6 81 81 A I + 0 0 150 -2,-0.3 2,-0.3 -10,-0.0 -1,-0.1 -0.814 54.5 111.3-107.2 85.0 0.6 -9.4 7.2 82 82 A F + 0 0 51 -2,-0.9 -10,-0.4 1,-0.0 3,-0.1 -0.960 31.8 172.9-157.8 150.6 -2.7 -7.4 7.6 83 83 A A S S- 0 0 82 1,-0.8 2,-0.2 -2,-0.3 -14,-0.0 0.245 71.2 -10.4-150.1 9.1 -6.3 -8.5 7.9 84 84 A G - 0 0 41 -16,-0.1 -1,-0.8 1,-0.0 -15,-0.1 -0.783 53.2-147.2 151.0 161.3 -8.4 -5.4 8.6 85 85 A I - 0 0 26 -2,-0.2 -16,-0.1 -3,-0.1 3,-0.0 0.711 61.8 -59.2-129.9 -49.1 -7.6 -1.8 9.5 86 86 A K S S- 0 0 144 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.036 83.3 -65.9-166.7 -65.2 -10.2 -0.1 11.8 87 87 A K S S- 0 0 190 -3,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.089 88.3 -51.8-167.4 -63.0 -13.7 0.0 10.4 88 88 A K S >> S+ 0 0 133 -3,-0.0 3,-1.3 0, 0.0 4,-0.6 0.198 117.9 75.9-163.4 -55.7 -14.1 2.2 7.3 89 89 A T H >> S+ 0 0 82 1,-0.3 4,-2.0 2,-0.2 3,-1.9 0.844 96.3 53.7 -42.0 -49.4 -12.6 5.7 8.0 90 90 A E H 3> S+ 0 0 4 1,-0.3 4,-2.4 2,-0.2 5,-0.5 0.848 100.7 58.7 -60.8 -35.7 -9.1 4.4 7.7 91 91 A R H <4 S+ 0 0 53 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.611 115.5 38.4 -67.6 -10.5 -9.8 2.9 4.2 92 92 A E H << S+ 0 0 80 -3,-1.9 -2,-0.2 -4,-0.6 -1,-0.2 0.639 118.3 47.2-107.8 -32.3 -10.7 6.5 3.2 93 93 A D H >X S+ 0 0 8 -4,-2.0 4,-2.6 -5,-0.2 3,-1.7 0.944 115.5 43.6 -71.0 -60.4 -7.9 8.3 5.2 94 94 A L H 3X S+ 0 0 1 -4,-2.4 4,-2.9 1,-0.3 5,-0.3 0.912 112.9 51.8 -53.2 -47.9 -5.0 6.0 4.1 95 95 A I H 34 S+ 0 0 9 -5,-0.5 -1,-0.3 1,-0.2 -2,-0.2 0.457 109.9 51.6 -79.5 2.1 -6.2 6.0 0.5 96 96 A A H <4 S+ 0 0 25 -3,-1.7 3,-0.4 -94,-0.2 4,-0.4 0.818 110.8 47.1 -93.8 -50.4 -6.3 9.8 0.7 97 97 A Y H >X S+ 0 0 10 -4,-2.6 3,-2.6 -95,-0.4 4,-2.1 0.943 111.8 48.6 -49.8 -59.2 -2.7 10.1 2.0 98 98 A L H 3X S+ 0 0 7 -4,-2.9 4,-2.2 1,-0.3 -63,-0.3 0.795 97.6 70.8 -61.6 -22.8 -1.2 7.7 -0.5 99 99 A K H 34 S+ 0 0 99 -3,-0.4 -1,-0.3 -5,-0.3 -2,-0.2 0.626 116.2 24.9 -69.3 -13.0 -3.0 9.6 -3.3 100 100 A K H X4 S+ 0 0 67 -3,-2.6 3,-1.8 -4,-0.4 -2,-0.2 0.457 109.3 71.3-121.0 -14.1 -0.4 12.4 -2.5 101 101 A A H >< S+ 0 0 9 -4,-2.1 3,-0.9 1,-0.3 -2,-0.2 0.890 94.9 60.5 -61.4 -36.0 2.4 10.1 -1.0 102 102 A T T 3< S+ 0 0 37 -4,-2.2 -1,-0.3 1,-0.3 -3,-0.1 0.470 116.1 32.8 -60.9 -8.6 2.6 9.1 -4.7 103 103 A N T < 0 0 138 -3,-1.8 -1,-0.3 -5,-0.1 -2,-0.2 -0.286 360.0 360.0-156.9 58.3 3.4 12.9 -5.3 104 104 A E < 0 0 161 -3,-0.9 -3,-0.1 -82,-0.0 -2,-0.1 0.209 360.0 360.0-143.4 360.0 5.3 14.5 -2.5