==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 30-MAR-06 2GJI . COMPND 2 MOLECULE: WSV230; . SOURCE 2 ORGANISM_SCIENTIFIC: SHRIMP WHITE SPOT SYNDROME VIRUS; . AUTHOR Y.LIU,J.L.WU,J.X.SONG,J.SIVARAMAN,C.L.HEW . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5894.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 61.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 25.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 223 0, 0.0 57,-0.1 0, 0.0 56,-0.1 0.000 360.0 360.0 360.0 35.7 2.1 -0.0 -1.2 2 2 A A + 0 0 45 55,-0.3 57,-0.7 54,-0.1 58,-0.1 -0.106 360.0 163.4-125.0 34.0 -0.4 2.2 -3.1 3 3 A T - 0 0 97 55,-0.2 2,-0.3 53,-0.2 53,-0.2 -0.083 19.0-160.9 -51.8 153.1 1.4 5.5 -2.9 4 4 A F E +A 55 0A 63 51,-1.0 51,-1.3 54,-0.1 2,-0.4 -0.936 11.2 177.4-146.4 118.9 0.3 8.3 -5.2 5 5 A Q E +A 54 0A 118 -2,-0.3 2,-0.3 49,-0.3 49,-0.2 -0.954 2.0 172.3-124.4 141.9 2.2 11.4 -6.2 6 6 A T E -A 53 0A 26 47,-1.7 47,-1.7 -2,-0.4 4,-0.1 -0.970 25.2-160.1-151.0 131.8 1.2 14.2 -8.7 7 7 A D S S+ 0 0 101 -2,-0.3 2,-0.3 45,-0.2 43,-0.1 -0.201 78.2 43.3-102.5 40.4 2.8 17.5 -9.6 8 8 A A S S- 0 0 49 45,-0.1 68,-0.1 41,-0.1 45,-0.1 -0.979 98.7 -58.8-170.2 167.2 -0.4 18.9 -11.1 9 9 A D - 0 0 48 -2,-0.3 67,-0.7 38,-0.2 2,-0.3 -0.059 53.3-172.3 -52.3 157.0 -4.2 19.3 -10.7 10 10 A F E -BC 45 75B 0 35,-1.6 35,-3.1 65,-0.2 2,-0.3 -0.960 22.0-109.8-150.2 165.0 -6.3 16.1 -10.5 11 11 A L E -BC 44 74B 42 63,-3.1 63,-2.7 -2,-0.3 2,-0.4 -0.787 25.0-157.6-102.5 144.1 -9.8 14.9 -10.4 12 12 A L E -BC 43 73B 13 31,-2.9 31,-2.0 -2,-0.3 2,-0.4 -0.964 4.1-166.6-123.7 137.7 -11.6 13.4 -7.4 13 13 A V E +BC 42 72B 41 59,-1.6 59,-1.8 -2,-0.4 29,-0.2 -0.981 31.0 119.0-126.8 124.8 -14.6 11.0 -7.3 14 14 A G S S- 0 0 17 27,-0.7 27,-0.0 -2,-0.4 55,-0.0 -0.158 76.2 -57.0-143.0-121.2 -16.6 10.2 -4.2 15 15 A D S S- 0 0 73 -2,-0.1 26,-0.1 25,-0.0 27,-0.1 -0.037 77.9 -92.8-130.4 29.3 -20.2 10.7 -3.0 16 16 A D + 0 0 67 1,-0.2 2,-0.4 25,-0.1 25,-0.1 0.988 63.5 175.4 56.5 67.9 -20.6 14.4 -3.4 17 17 A T > - 0 0 55 1,-0.1 3,-1.8 24,-0.0 -1,-0.2 -0.862 39.4-139.1-108.7 140.3 -19.6 15.4 0.2 18 18 A S T > S+ 0 0 92 -2,-0.4 3,-1.0 1,-0.3 4,-0.4 0.679 101.8 72.1 -67.0 -16.7 -19.2 18.9 1.5 19 19 A R T 3> + 0 0 164 1,-0.2 4,-3.3 2,-0.2 -1,-0.3 0.503 68.8 95.1 -76.5 -3.3 -16.1 17.7 3.3 20 20 A Y H <> S+ 0 0 55 -3,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.840 84.0 50.2 -55.9 -34.4 -14.4 17.5 -0.0 21 21 A E H <> S+ 0 0 88 -3,-1.0 4,-2.5 2,-0.2 -1,-0.2 0.919 113.2 43.6 -70.9 -45.3 -13.0 21.0 0.6 22 22 A E H > S+ 0 0 100 -4,-0.4 4,-1.4 2,-0.2 -2,-0.2 0.907 111.6 54.4 -66.7 -43.1 -11.7 20.1 4.1 23 23 A V H < S+ 0 0 2 -4,-3.3 3,-0.2 1,-0.2 -1,-0.2 0.913 115.6 38.6 -57.3 -45.5 -10.3 16.8 2.9 24 24 A M H >< S+ 0 0 1 -4,-1.7 3,-2.5 -5,-0.3 6,-0.4 0.868 106.8 64.8 -73.6 -38.0 -8.3 18.5 0.2 25 25 A K H 3< S+ 0 0 122 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.798 85.4 75.4 -55.0 -29.1 -7.4 21.5 2.4 26 26 A T T 3< S+ 0 0 62 -4,-1.4 2,-0.7 -3,-0.2 -1,-0.3 0.754 87.9 69.8 -55.6 -24.0 -5.4 19.0 4.5 27 27 A F S X S- 0 0 42 -3,-2.5 3,-2.5 -4,-0.2 -1,-0.1 -0.872 72.2-155.4-103.0 113.1 -2.8 19.1 1.8 28 28 A D T 3 S+ 0 0 133 -2,-0.7 20,-0.2 1,-0.3 -1,-0.1 0.786 93.1 72.0 -53.5 -27.9 -0.9 22.4 1.5 29 29 A T T 3 S+ 0 0 14 23,-0.1 19,-2.8 18,-0.1 -1,-0.3 0.792 79.2 93.1 -59.3 -28.1 -0.4 21.4 -2.1 30 30 A V E < +D 47 0B 8 -3,-2.5 17,-0.2 -6,-0.4 3,-0.1 -0.509 46.2 171.6 -71.5 130.8 -4.0 22.1 -2.8 31 31 A E E - 0 0 106 15,-2.6 2,-0.3 1,-0.4 16,-0.2 0.776 62.0 -21.3-105.8 -42.9 -4.7 25.7 -3.9 32 32 A A E -D 46 0B 50 14,-1.7 14,-2.8 2,-0.0 -1,-0.4 -0.979 54.4-133.2-161.9 167.0 -8.4 25.6 -4.9 33 33 A V E -D 45 0B 32 -2,-0.3 2,-0.4 12,-0.2 12,-0.2 -0.956 13.2-170.4-131.8 150.1 -11.3 23.3 -5.8 34 34 A R E -D 44 0B 182 10,-1.6 10,-2.9 -2,-0.3 2,-0.2 -0.997 19.1-129.7-143.3 135.2 -14.0 23.3 -8.5 35 35 A K E -D 43 0B 89 -2,-0.4 2,-0.6 8,-0.2 8,-0.2 -0.533 26.1-117.5 -83.0 148.9 -17.1 21.2 -9.1 36 36 A S - 0 0 20 6,-2.2 6,-0.3 3,-0.6 -1,-0.1 -0.775 13.9-158.9 -90.9 118.3 -17.8 19.6 -12.4 37 37 A D S S+ 0 0 137 -2,-0.6 3,-0.2 1,-0.2 -1,-0.2 0.869 95.7 49.8 -60.9 -37.9 -21.0 20.9 -14.1 38 38 A L S S+ 0 0 147 1,-0.3 2,-0.5 -3,-0.1 -1,-0.2 0.916 124.6 25.7 -67.8 -44.4 -21.1 17.7 -16.2 39 39 A D > - 0 0 93 3,-0.1 3,-1.5 1,-0.1 -3,-0.6 -0.958 59.4-167.1-127.6 114.6 -20.7 15.4 -13.2 40 40 A D T 3 S+ 0 0 96 -2,-0.5 -1,-0.1 1,-0.3 -4,-0.1 0.720 93.8 59.8 -68.7 -20.8 -21.7 16.4 -9.7 41 41 A R T 3 S+ 0 0 157 -26,-0.1 -27,-0.7 -25,-0.1 2,-0.4 0.214 95.9 80.4 -91.4 14.5 -19.7 13.5 -8.4 42 42 A V E < -B 13 0B 23 -3,-1.5 -6,-2.2 -6,-0.3 2,-0.4 -0.983 55.6-179.5-126.8 132.0 -16.5 14.9 -10.0 43 43 A Y E -BD 12 35B 37 -31,-2.0 -31,-2.9 -2,-0.4 2,-0.6 -0.990 17.9-144.2-132.7 138.6 -14.3 17.6 -8.6 44 44 A M E -BD 11 34B 46 -10,-2.9 -10,-1.6 -2,-0.4 2,-0.5 -0.894 13.4-156.7-105.5 118.9 -11.1 19.1 -10.0 45 45 A V E -BD 10 33B 1 -35,-3.1 -35,-1.6 -2,-0.6 2,-0.7 -0.825 4.0-152.0 -97.7 125.9 -8.4 20.1 -7.5 46 46 A C E - D 0 32B 53 -14,-2.8 -15,-2.6 -2,-0.5 -14,-1.7 -0.857 12.9-150.6-100.7 112.2 -5.9 22.8 -8.5 47 47 A L E - D 0 30B 16 -2,-0.7 2,-0.3 -17,-0.2 -17,-0.2 -0.313 27.2 -94.6 -76.1 162.1 -2.5 22.5 -6.8 48 48 A K > - 0 0 72 -19,-2.8 3,-3.1 -20,-0.2 2,-0.4 -0.625 44.9-100.7 -81.1 132.6 -0.3 25.4 -6.1 49 49 A Q T 3 S+ 0 0 195 -2,-0.3 -1,-0.1 1,-0.3 3,-0.1 -0.323 113.4 21.2 -54.2 107.6 2.4 26.2 -8.7 50 50 A G T 3 S+ 0 0 74 1,-0.5 -1,-0.3 -2,-0.4 2,-0.1 0.127 102.4 104.9 118.7 -19.3 5.5 24.7 -7.1 51 51 A S < - 0 0 33 -3,-3.1 -1,-0.5 -22,-0.2 2,-0.4 -0.442 55.8-146.9 -90.6 166.4 3.9 22.2 -4.7 52 52 A T - 0 0 50 -2,-0.1 2,-1.3 -3,-0.1 -45,-0.2 -0.932 8.5-142.6-140.4 113.8 3.6 18.5 -5.1 53 53 A F E +A 6 0A 0 -47,-1.7 -47,-1.7 -2,-0.4 2,-0.4 -0.603 33.4 174.7 -77.2 95.0 0.6 16.4 -3.8 54 54 A V E -A 5 0A 54 -2,-1.3 2,-0.6 -49,-0.2 -49,-0.3 -0.825 22.7-151.2-106.0 142.9 2.3 13.2 -2.6 55 55 A L E -A 4 0A 0 -51,-1.3 -51,-1.0 -2,-0.4 4,-0.1 -0.903 12.9-179.2-116.8 104.3 0.6 10.4 -0.8 56 56 A N S S+ 0 0 148 -2,-0.6 -53,-0.2 1,-0.2 -1,-0.1 0.763 94.1 32.8 -70.1 -25.3 2.8 8.4 1.6 57 57 A G S S- 0 0 35 1,-0.3 3,-0.4 -53,-0.1 -55,-0.3 0.537 109.3-133.7-106.5 -11.2 -0.1 6.2 2.4 58 58 A G > - 0 0 0 1,-0.2 4,-0.7 -54,-0.2 -1,-0.3 -0.567 51.0 -40.0 93.8-158.9 -1.8 6.2 -1.0 59 59 A I H > S+ 0 0 19 -57,-0.7 4,-1.9 -2,-0.2 -1,-0.2 0.728 129.7 68.7 -78.8 -23.1 -5.5 6.7 -1.8 60 60 A E H > S+ 0 0 81 -3,-0.4 4,-1.4 1,-0.2 -1,-0.2 0.920 97.9 49.8 -61.1 -45.6 -6.5 4.6 1.2 61 61 A E H > S+ 0 0 66 -4,-0.3 4,-0.9 1,-0.2 -1,-0.2 0.834 109.6 52.9 -62.8 -32.9 -5.3 7.1 3.7 62 62 A L H X S+ 0 0 0 -4,-0.7 4,-1.3 1,-0.2 3,-0.3 0.860 104.0 55.4 -71.0 -36.4 -7.2 9.8 1.8 63 63 A R H X>S+ 0 0 56 -4,-1.9 4,-2.0 1,-0.2 5,-1.6 0.842 101.8 58.2 -65.0 -33.9 -10.4 7.8 2.0 64 64 A L H <5S+ 0 0 144 -4,-1.4 -1,-0.2 3,-0.2 -2,-0.2 0.844 100.2 59.3 -65.0 -34.0 -10.1 7.6 5.8 65 65 A L H <5S+ 0 0 81 -4,-0.9 -2,-0.2 -3,-0.3 -1,-0.2 0.988 117.1 27.7 -57.9 -65.3 -10.1 11.4 5.9 66 66 A T H <5S- 0 0 28 -4,-1.3 -1,-0.2 2,-0.2 -2,-0.2 0.760 110.6-121.3 -69.5 -25.0 -13.5 12.0 4.3 67 67 A G T <5S+ 0 0 58 -4,-2.0 2,-0.4 -5,-0.3 -3,-0.2 0.724 75.2 112.4 89.7 24.0 -14.6 8.6 5.6 68 68 A D > < - 0 0 41 -5,-1.6 3,-0.7 -6,-0.2 -1,-0.2 -0.991 52.1-161.6-134.4 127.4 -15.4 7.2 2.1 69 69 A S T 3 S+ 0 0 98 -2,-0.4 -6,-0.1 1,-0.2 -1,-0.1 0.716 90.2 72.1 -76.0 -21.5 -13.6 4.4 0.3 70 70 A T T 3 + 0 0 71 -7,-0.1 -1,-0.2 2,-0.1 -57,-0.2 0.747 69.0 116.0 -65.0 -23.4 -15.2 5.5 -3.0 71 71 A L < + 0 0 5 -3,-0.7 2,-0.3 -8,-0.1 -57,-0.2 -0.282 44.9 169.6 -51.9 115.6 -12.8 8.5 -2.8 72 72 A E E -C 13 0B 97 -59,-1.8 -59,-1.6 -2,-0.1 2,-0.4 -0.878 27.0-138.9-130.2 162.2 -10.5 8.1 -5.8 73 73 A I E +C 12 0B 16 -2,-0.3 -61,-0.2 -61,-0.2 -14,-0.1 -0.983 19.7 178.7-126.8 133.1 -8.0 10.2 -7.7 74 74 A Q E -C 11 0B 105 -63,-2.7 -63,-3.1 -2,-0.4 2,-0.6 -0.941 38.8 -94.7-132.3 153.6 -7.5 10.6 -11.4 75 75 A P E -C 10 0B 100 0, 0.0 2,-0.3 0, 0.0 -65,-0.2 -0.534 41.3-130.2 -69.8 111.6 -5.1 12.6 -13.7 76 76 A M - 0 0 55 -67,-0.7 2,-0.4 -2,-0.6 -67,-0.0 -0.472 20.1-140.7 -66.0 121.8 -6.9 15.8 -14.7 77 77 A I - 0 0 148 -2,-0.3 -1,-0.1 1,-0.0 -67,-0.0 -0.721 12.9-126.6 -88.9 130.8 -6.7 16.2 -18.5 78 78 A V - 0 0 116 -2,-0.4 -1,-0.0 1,-0.1 0, 0.0 -0.577 25.8-121.2 -78.5 133.2 -6.1 19.7 -19.8 79 79 A P - 0 0 109 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.245 22.5-123.4 -69.8 159.4 -8.6 20.9 -22.5 80 80 A T - 0 0 128 0, 0.0 2,-0.7 0, 0.0 0, 0.0 -0.806 11.4-130.1-108.0 148.5 -7.6 22.0 -26.0 81 81 A T 0 0 132 -2,-0.3 0, 0.0 1,-0.3 0, 0.0 -0.853 360.0 360.0-101.1 109.3 -8.2 25.4 -27.6 82 82 A E 0 0 233 -2,-0.7 -1,-0.3 0, 0.0 0, 0.0 0.947 360.0 360.0 57.2 360.0 -9.7 25.0 -31.1