==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIMENTIN 08-AUG-01 1GK7 . COMPND 2 MOLECULE: VIMENTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.V.STRELKOV,H.HERRMANN,N.GEISLER,R.ZIMBELMANN,U.AEBI, . 39 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4110.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 89.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 84.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 100 A G > 0 0 96 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0-163.4 -4.1 13.7 4.3 2 101 A S H > + 0 0 101 2,-0.2 4,-1.9 1,-0.2 5,-0.2 0.828 360.0 50.9 -36.7 -46.6 -1.6 11.0 5.4 3 102 A N H > S+ 0 0 136 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.951 112.2 46.5 -65.0 -46.6 0.4 11.1 2.0 4 103 A E H > S+ 0 0 80 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.898 108.6 57.7 -60.9 -35.5 0.8 14.9 2.1 5 104 A K H X S+ 0 0 153 -4,-2.3 4,-2.0 1,-0.2 5,-0.2 0.955 107.0 45.8 -60.9 -45.8 1.8 14.7 5.8 6 105 A V H X S+ 0 0 85 -4,-1.9 4,-2.3 1,-0.2 -1,-0.2 0.929 110.8 57.3 -64.8 -40.3 4.7 12.4 5.0 7 106 A E H X S+ 0 0 93 -4,-2.2 4,-2.3 1,-0.2 -2,-0.2 0.934 107.7 43.7 -56.6 -49.2 5.5 14.8 2.1 8 107 A L H X S+ 0 0 96 -4,-2.5 4,-2.5 2,-0.2 -1,-0.2 0.848 112.8 52.3 -69.7 -34.5 5.9 17.9 4.3 9 108 A Q H X S+ 0 0 98 -4,-2.0 4,-2.5 -5,-0.3 -1,-0.2 0.910 110.2 49.3 -66.1 -40.5 7.9 16.1 6.9 10 109 A E H X S+ 0 0 106 -4,-2.3 4,-2.8 -5,-0.2 5,-0.3 0.914 110.4 50.5 -63.3 -43.2 10.3 14.8 4.2 11 110 A L H X S+ 0 0 116 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.948 112.0 47.0 -61.2 -47.7 10.6 18.4 2.8 12 111 A N H X S+ 0 0 105 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.913 114.4 47.8 -58.7 -42.7 11.5 19.7 6.3 13 112 A D H X S+ 0 0 77 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.872 111.0 49.0 -70.0 -41.6 13.9 16.9 6.9 14 113 A R H X S+ 0 0 169 -4,-2.8 4,-2.2 2,-0.2 -1,-0.2 0.883 111.5 50.7 -67.5 -36.6 15.7 17.2 3.6 15 114 A F H X S+ 0 0 123 -4,-2.3 4,-3.1 -5,-0.3 5,-0.3 0.945 107.8 53.1 -66.0 -41.3 16.0 21.0 4.1 16 115 A A H X S+ 0 0 40 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.926 110.5 47.0 -56.3 -45.4 17.5 20.5 7.5 17 116 A N H X S+ 0 0 103 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.913 114.1 48.6 -64.0 -43.5 20.1 18.2 6.1 18 117 A Y H X S+ 0 0 146 -4,-2.2 4,-2.7 2,-0.2 5,-0.3 0.941 111.4 46.6 -60.5 -52.3 20.8 20.7 3.3 19 118 A I H X S+ 0 0 41 -4,-3.1 4,-2.3 1,-0.2 5,-0.2 0.870 111.4 53.2 -64.5 -37.5 21.2 23.8 5.5 20 119 A D H X S+ 0 0 100 -4,-2.2 4,-2.2 -5,-0.3 -1,-0.2 0.930 111.5 46.9 -61.3 -44.0 23.4 21.8 7.9 21 120 A K H X S+ 0 0 142 -4,-2.0 4,-2.7 -5,-0.2 -2,-0.2 0.934 114.4 44.2 -64.3 -51.0 25.7 20.8 5.0 22 121 A V H X S+ 0 0 52 -4,-2.7 4,-2.4 2,-0.2 -1,-0.2 0.872 111.2 54.5 -67.6 -30.8 26.0 24.2 3.4 23 122 A R H X S+ 0 0 165 -4,-2.3 4,-2.0 -5,-0.3 -1,-0.2 0.931 110.5 47.2 -65.3 -43.2 26.5 25.9 6.8 24 123 A F H X S+ 0 0 119 -4,-2.2 4,-2.4 -5,-0.2 -2,-0.2 0.932 112.7 48.8 -61.3 -47.1 29.4 23.5 7.4 25 124 A L H X S+ 0 0 74 -4,-2.7 4,-2.5 2,-0.2 -1,-0.2 0.848 107.9 53.8 -65.2 -32.6 30.8 24.1 4.0 26 125 A E H X S+ 0 0 96 -4,-2.4 4,-1.8 2,-0.2 -1,-0.2 0.919 109.7 48.4 -66.0 -40.3 30.6 27.9 4.4 27 126 A Q H X S+ 0 0 102 -4,-2.0 4,-2.3 1,-0.2 -2,-0.2 0.919 111.8 50.3 -62.5 -43.2 32.6 27.6 7.6 28 127 A Q H X S+ 0 0 71 -4,-2.4 4,-3.1 1,-0.2 5,-0.3 0.889 105.6 56.2 -63.6 -38.2 35.1 25.4 5.7 29 128 A N H X S+ 0 0 91 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.907 108.9 46.8 -59.1 -43.0 35.4 28.0 2.9 30 129 A K H X S+ 0 0 112 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.900 112.6 49.2 -69.3 -37.6 36.4 30.6 5.4 31 130 A I H X S+ 0 0 66 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.941 112.8 47.9 -64.3 -48.1 38.9 28.3 7.1 32 131 A L H X S+ 0 0 80 -4,-3.1 4,-2.7 2,-0.2 5,-0.2 0.912 109.9 51.9 -58.0 -46.0 40.4 27.4 3.8 33 132 A L H X S+ 0 0 96 -4,-2.3 4,-1.8 -5,-0.3 -1,-0.2 0.947 111.0 47.6 -56.8 -45.2 40.6 31.0 2.7 34 133 A A H < S+ 0 0 50 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.872 112.2 49.5 -66.5 -40.6 42.4 31.9 5.9 35 134 A E H >< S+ 0 0 107 -4,-2.4 3,-1.6 1,-0.2 -1,-0.2 0.919 110.9 49.8 -62.4 -42.9 44.9 29.0 5.7 36 135 A L H >< S+ 0 0 123 -4,-2.7 3,-1.5 1,-0.3 -2,-0.2 0.808 99.9 64.2 -70.3 -27.2 45.7 29.8 2.0 37 136 A E T 3< S+ 0 0 128 -4,-1.8 -1,-0.3 1,-0.3 -2,-0.2 0.459 90.3 69.5 -77.7 -2.0 46.4 33.4 2.8 38 137 A Q T < 0 0 157 -3,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.385 360.0 360.0 -91.1 6.9 49.3 32.3 5.0 39 138 A L < 0 0 215 -3,-1.5 -1,-0.2 -4,-0.0 -2,-0.1 0.740 360.0 360.0 -56.1 360.0 51.4 31.1 1.9