==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 05-APR-06 2GLW . COMPND 2 MOLECULE: 92AA LONG HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII; . AUTHOR M.COLES,M.HULKO,V.TRUFFAULT,J.MARTIN,A.N.LUPAS . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6424.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 64.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 34.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 220 0, 0.0 2,-0.2 0, 0.0 84,-0.0 0.000 360.0 360.0 360.0-170.0 83.8 13.4 -0.4 2 2 A D - 0 0 145 83,-0.1 2,-0.4 81,-0.0 81,-0.0 -0.480 360.0-160.8 -73.6 144.0 81.2 13.9 -3.2 3 3 A V - 0 0 67 -2,-0.2 82,-0.2 1,-0.1 3,-0.1 -0.982 19.3-158.8-128.1 137.4 77.9 12.0 -2.9 4 4 A L S S- 0 0 67 80,-1.2 2,-0.3 -2,-0.4 81,-0.1 0.714 82.4 -8.3 -86.7 -18.0 75.5 11.2 -5.8 5 5 A A - 0 0 13 79,-0.4 79,-2.2 2,-0.0 2,-0.4 -0.959 61.0-146.8-171.8 152.7 72.6 10.7 -3.3 6 6 A K E +A 83 0A 125 -2,-0.3 2,-0.3 77,-0.2 77,-0.2 -0.982 28.1 149.0-133.8 125.2 72.0 10.4 0.5 7 7 A F E -A 82 0A 10 75,-1.9 75,-2.6 -2,-0.4 2,-0.4 -0.971 35.4-123.1-150.9 162.3 69.4 8.2 2.2 8 8 A H E +A 81 0A 116 -2,-0.3 2,-0.3 73,-0.2 73,-0.2 -0.911 33.5 156.7-113.4 139.1 68.8 6.2 5.5 9 9 A T E -A 80 0A 20 71,-1.9 71,-2.7 -2,-0.4 2,-0.3 -0.982 31.9-124.1-150.6 162.3 68.0 2.5 5.8 10 10 A T E -A 79 0A 35 -2,-0.3 2,-0.4 69,-0.3 8,-0.3 -0.741 34.0-101.3-110.1 158.0 68.4 -0.3 8.5 11 11 A V - 0 0 10 67,-1.6 66,-2.1 64,-0.4 67,-0.3 -0.616 37.0-167.8 -79.3 134.9 70.1 -3.7 8.0 12 12 A H B >> -D 16 0B 100 4,-1.7 3,-1.6 -2,-0.4 4,-0.6 -0.607 42.4 -55.1-113.5 171.9 68.0 -6.7 7.4 13 13 A R G >4 S+ 0 0 214 1,-0.3 3,-1.8 2,-0.2 -1,-0.2 0.024 126.1 23.2 -46.3 152.5 68.9 -10.5 7.4 14 14 A I G 34 S- 0 0 124 1,-0.3 -1,-0.3 -3,-0.1 52,-0.1 0.568 128.1 -80.2 62.7 7.4 71.8 -11.5 5.2 15 15 A G G <4 S+ 0 0 4 -3,-1.6 49,-1.8 1,-0.2 2,-0.3 0.735 89.0 150.8 77.6 16.1 73.0 -7.8 5.3 16 16 A R E << -DE 12 63B 88 -3,-1.8 -4,-1.7 -4,-0.6 2,-0.3 -0.662 21.6-178.8 -85.5 143.0 70.5 -6.9 2.6 17 17 A I E - E 0 62B 3 45,-2.3 45,-2.4 -2,-0.3 2,-0.5 -0.952 18.5-137.8-133.2 157.7 68.9 -3.3 2.5 18 18 A I E - E 0 61B 63 -2,-0.3 43,-0.2 -8,-0.3 -8,-0.1 -0.948 13.8-140.3-117.1 129.6 66.3 -1.7 0.2 19 19 A I - 0 0 9 41,-1.5 -10,-0.1 -2,-0.5 -12,-0.0 -0.583 33.0-100.9 -80.0 147.0 66.7 1.8 -1.2 20 20 A P >> - 0 0 62 0, 0.0 4,-1.8 0, 0.0 3,-0.7 -0.329 28.7-120.7 -63.1 143.1 63.5 4.0 -1.3 21 21 A A H 3> S+ 0 0 67 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.800 111.4 64.7 -58.0 -26.5 62.1 4.1 -4.9 22 22 A G H 3> S+ 0 0 53 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.933 103.7 43.9 -64.8 -43.7 62.5 7.9 -4.7 23 23 A T H <> S+ 0 0 24 -3,-0.7 4,-2.1 1,-0.2 5,-0.2 0.922 110.4 55.5 -69.7 -39.2 66.3 7.6 -4.5 24 24 A R H X>S+ 0 0 61 -4,-1.8 5,-2.2 2,-0.2 4,-1.2 0.906 109.8 47.8 -56.5 -42.6 66.4 4.9 -7.3 25 25 A K H ><5S+ 0 0 179 -4,-1.9 3,-0.6 1,-0.2 -2,-0.2 0.969 112.3 46.4 -67.5 -50.2 64.5 7.3 -9.6 26 26 A F H 3<5S+ 0 0 169 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.837 116.6 46.7 -58.1 -36.2 66.8 10.4 -8.9 27 27 A Y H 3<5S- 0 0 35 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.678 106.9-125.9 -86.8 -14.3 69.9 8.2 -9.4 28 28 A G T <<5 + 0 0 48 -4,-1.2 2,-0.5 -3,-0.6 -3,-0.2 0.929 47.3 169.5 75.2 39.9 68.7 6.5 -12.6 29 29 A I < + 0 0 25 -5,-2.2 2,-0.3 -6,-0.1 -1,-0.2 -0.779 9.4 171.7 -93.2 132.4 69.1 2.9 -11.2 30 30 A E > - 0 0 136 -2,-0.5 3,-1.9 1,-0.0 26,-0.3 -0.887 45.6 -78.5-129.2 161.7 67.8 -0.2 -13.0 31 31 A Q T 3 S+ 0 0 134 -2,-0.3 26,-0.2 1,-0.2 3,-0.1 -0.291 118.1 29.0 -57.8 138.7 68.3 -3.9 -12.4 32 32 A G T 3 S+ 0 0 15 24,-2.0 -1,-0.2 1,-0.4 2,-0.1 0.187 94.0 117.8 94.5 -16.1 71.7 -5.1 -13.7 33 33 A D < - 0 0 20 -3,-1.9 23,-2.3 23,-0.1 2,-0.4 -0.425 59.7-131.3 -77.5 160.9 73.4 -1.7 -13.2 34 34 A F E -BC 55 88A 91 54,-1.9 54,-3.0 21,-0.2 2,-0.3 -0.921 23.3-178.4-112.6 139.3 76.3 -1.3 -10.7 35 35 A V E -BC 54 87A 6 19,-2.4 19,-2.4 -2,-0.4 2,-0.5 -0.924 19.6-139.0-130.2 155.8 76.6 1.5 -8.1 36 36 A E E +BC 53 86A 53 50,-2.7 49,-3.2 -2,-0.3 50,-1.8 -0.955 33.4 165.1-118.8 123.8 79.4 2.2 -5.6 37 37 A I E -BC 52 84A 5 15,-2.1 15,-2.2 -2,-0.5 2,-0.3 -0.970 24.7-151.4-140.3 158.5 78.2 3.2 -2.1 38 38 A K E -BC 51 83A 63 45,-2.8 45,-2.7 -2,-0.3 2,-0.3 -0.981 10.0-151.0-132.9 146.1 79.5 3.6 1.5 39 39 A I E -BC 50 82A 5 11,-2.6 11,-1.8 -2,-0.3 2,-0.4 -0.874 6.6-167.6-114.8 151.0 77.7 3.3 4.9 40 40 A V E +BC 49 81A 41 41,-2.1 41,-1.8 -2,-0.3 2,-0.3 -0.962 10.8 168.2-138.4 124.8 78.4 5.1 8.2 41 41 A K E -B 48 0A 28 7,-2.3 7,-2.8 -2,-0.4 2,-0.5 -0.974 26.2-134.2-132.8 144.9 77.0 4.2 11.6 42 42 A Y E +B 47 0A 139 -2,-0.3 2,-0.4 5,-0.2 3,-0.0 -0.863 23.1 177.3-103.1 130.0 78.0 5.4 15.1 43 43 A E E > -B 46 0A 35 3,-1.6 3,-2.1 -2,-0.5 2,-0.1 -0.990 58.7 -37.6-131.8 129.7 78.5 3.0 18.0 44 44 A G T 3 S- 0 0 70 -2,-0.4 -2,-0.0 1,-0.3 0, 0.0 -0.360 120.5 -31.5 59.8-128.3 79.8 4.1 21.5 45 45 A E T 3 S+ 0 0 163 -2,-0.1 -1,-0.3 1,-0.1 -3,-0.0 0.209 126.6 75.2-105.1 13.9 82.4 6.8 21.0 46 46 A E E < S-B 43 0A 92 -3,-2.1 -3,-1.6 2,-0.0 2,-0.3 -0.979 72.5-134.7-131.1 129.1 83.8 5.5 17.7 47 47 A P E -B 42 0A 77 0, 0.0 2,-0.4 0, 0.0 -5,-0.2 -0.563 17.8-151.6 -75.2 139.7 82.2 5.7 14.2 48 48 A K E +B 41 0A 53 -7,-2.8 -7,-2.3 -2,-0.3 2,-0.3 -0.886 18.5 179.1-110.4 137.5 82.2 2.5 12.0 49 49 A E E -B 40 0A 107 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.921 11.7-176.0-134.6 162.4 82.3 2.8 8.2 50 50 A G E -B 39 0A 5 -11,-1.8 -11,-2.6 -2,-0.3 2,-0.4 -0.940 5.6-164.5-158.9 135.9 82.4 0.5 5.2 51 51 A T E +B 38 0A 57 -2,-0.3 2,-0.3 -13,-0.2 -13,-0.2 -0.971 23.1 144.3-124.1 138.1 82.6 1.1 1.4 52 52 A F E -B 37 0A 25 -15,-2.2 -15,-2.1 -2,-0.4 2,-0.4 -0.980 44.3-105.9-156.0 173.5 81.9 -1.5 -1.4 53 53 A T E -B 36 0A 82 -2,-0.3 2,-0.3 -17,-0.2 -17,-0.2 -0.822 37.4-177.7-106.9 142.1 80.4 -2.0 -4.9 54 54 A A E -B 35 0A 8 -19,-2.4 -19,-2.4 -2,-0.4 2,-0.3 -0.999 22.7-130.5-141.1 146.2 77.0 -3.6 -5.3 55 55 A R E -B 34 0A 151 -2,-0.3 2,-0.5 -21,-0.2 8,-0.3 -0.702 32.5-112.2 -93.6 146.0 74.7 -4.6 -8.2 56 56 A V - 0 0 14 -23,-2.3 -24,-2.0 -2,-0.3 6,-0.2 -0.634 39.8-175.2 -79.0 124.8 71.0 -3.5 -8.2 57 57 A G > - 0 0 28 4,-2.0 3,-1.5 -2,-0.5 4,-0.1 -0.265 41.0 -46.7-103.9-166.5 68.7 -6.5 -7.8 58 58 A E G > S+ 0 0 132 1,-0.3 3,-1.8 2,-0.2 -1,-0.3 -0.224 126.5 16.5 -61.7 152.9 64.9 -6.7 -7.8 59 59 A Q G 3 S- 0 0 133 1,-0.3 -1,-0.3 -3,-0.1 -40,-0.1 0.654 128.8 -74.9 53.5 21.1 62.9 -4.1 -5.8 60 60 A G G < S+ 0 0 9 -3,-1.5 -41,-1.5 1,-0.2 -1,-0.3 0.790 84.7 161.5 73.6 20.5 66.1 -2.0 -5.7 61 61 A S E < -E 18 0B 23 -3,-1.8 -4,-2.0 -43,-0.2 2,-0.3 -0.535 17.8-172.0 -78.0 148.2 67.8 -4.3 -3.1 62 62 A V E -E 17 0B 8 -45,-2.4 -45,-2.3 -2,-0.2 2,-0.6 -0.981 14.6-137.7-138.7 146.0 71.5 -4.2 -2.5 63 63 A I E -E 16 0B 76 -2,-0.3 -47,-0.2 -8,-0.3 -8,-0.1 -0.906 8.5-147.0-110.8 122.7 73.8 -6.4 -0.4 64 64 A I - 0 0 4 -49,-1.8 2,-0.1 -2,-0.6 -10,-0.0 -0.543 37.7 -97.5 -78.4 144.6 76.6 -5.2 1.9 65 65 A P >> - 0 0 46 0, 0.0 4,-1.7 0, 0.0 3,-1.0 -0.392 24.4-132.7 -64.2 133.3 79.6 -7.6 2.2 66 66 A K H 3> S+ 0 0 136 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.852 104.8 65.5 -55.2 -34.2 79.4 -9.7 5.4 67 67 A A H 3> S+ 0 0 67 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.904 105.0 43.4 -58.7 -37.9 83.1 -8.8 6.1 68 68 A L H <> S+ 0 0 41 -3,-1.0 4,-2.1 1,-0.2 5,-0.2 0.860 107.0 61.0 -77.1 -32.7 82.1 -5.2 6.6 69 69 A R H X>S+ 0 0 53 -4,-1.7 5,-2.0 1,-0.2 4,-1.2 0.917 108.8 43.0 -57.7 -45.5 79.0 -6.1 8.7 70 70 A D H <5S+ 0 0 106 -4,-1.9 3,-0.2 2,-0.2 -1,-0.2 0.941 113.4 49.1 -70.2 -47.2 81.2 -7.7 11.3 71 71 A V H <5S+ 0 0 105 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.2 0.877 115.4 45.2 -60.5 -38.3 84.0 -5.1 11.4 72 72 A I H <5S- 0 0 2 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.2 0.736 106.0-129.2 -82.6 -17.6 81.3 -2.3 11.8 73 73 A G T <5 + 0 0 21 -4,-1.2 2,-0.3 -5,-0.2 -3,-0.2 0.910 45.1 169.4 77.6 35.3 79.3 -4.2 14.4 74 74 A I < - 0 0 22 -5,-2.0 -1,-0.2 -6,-0.2 -2,-0.1 -0.646 12.6-169.2 -89.5 142.8 76.0 -3.8 12.6 75 75 A K > - 0 0 114 -2,-0.3 3,-1.7 -62,-0.0 -64,-0.4 -0.924 34.1 -81.7-129.1 157.5 72.8 -5.7 13.6 76 76 A P T 3 S+ 0 0 97 0, 0.0 -64,-0.2 0, 0.0 3,-0.1 -0.280 115.3 24.9 -55.3 134.0 69.3 -6.3 12.1 77 77 A G T 3 S+ 0 0 61 -66,-2.1 2,-0.4 1,-0.3 -65,-0.1 0.449 90.9 124.4 92.0 0.2 67.0 -3.3 12.8 78 78 A E < - 0 0 56 -3,-1.7 -67,-1.6 -67,-0.3 2,-0.5 -0.780 56.1-133.8 -97.5 134.4 69.8 -0.7 13.2 79 79 A V E -A 10 0A 95 -2,-0.4 2,-0.3 -69,-0.2 -69,-0.3 -0.745 24.6-179.7 -91.9 132.8 69.6 2.4 11.0 80 80 A I E -A 9 0A 4 -71,-2.7 -71,-1.9 -2,-0.5 2,-0.4 -0.880 29.3-117.2-121.9 159.5 72.7 3.7 9.2 81 81 A E E -AC 8 40A 65 -41,-1.8 -41,-2.1 -2,-0.3 2,-0.5 -0.775 31.2-154.5 -97.7 131.6 73.2 6.7 6.8 82 82 A V E -AC 7 39A 0 -75,-2.6 -75,-1.9 -2,-0.4 2,-0.5 -0.940 9.8-169.0-115.8 130.2 74.2 5.7 3.3 83 83 A L E -AC 6 38A 46 -45,-2.7 -45,-2.8 -2,-0.5 2,-0.2 -0.956 18.0-135.7-116.5 131.0 76.1 7.8 0.8 84 84 A L E - C 0 37A 1 -79,-2.2 -80,-1.2 -2,-0.5 -79,-0.4 -0.558 19.8-178.7 -80.3 141.6 76.5 7.0 -2.9 85 85 A L E - 0 0 53 -49,-3.2 2,-0.3 1,-0.4 -48,-0.2 0.695 57.3 -28.3-111.5 -32.5 80.1 7.4 -4.2 86 86 A G E - C 0 36A 11 -50,-1.8 -50,-2.7 2,-0.0 -1,-0.4 -0.969 51.6-130.3-168.8-178.3 79.9 6.5 -8.0 87 87 A H E - C 0 35A 118 -2,-0.3 2,-0.4 -52,-0.3 -52,-0.2 -0.999 6.7-159.1-148.8 151.2 78.1 4.4 -10.6 88 88 A Y E - C 0 34A 138 -54,-3.0 -54,-1.9 -2,-0.3 -2,-0.0 -0.991 9.4-164.7-133.2 139.2 79.0 2.1 -13.5 89 89 A K - 0 0 159 -2,-0.4 -56,-0.1 -56,-0.2 -57,-0.0 -0.928 31.7 -95.0-123.0 149.9 76.8 1.1 -16.6 90 90 A P - 0 0 92 0, 0.0 2,-0.4 0, 0.0 -1,-0.0 -0.188 39.8-145.1 -56.3 148.5 77.1 -1.7 -19.1 91 91 A R 0 0 243 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.945 360.0 360.0-122.0 141.1 79.0 -0.8 -22.4 92 92 A N 0 0 228 -2,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.979 360.0 360.0-123.2 360.0 78.2 -2.0 -25.9