==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME-BINDING PROTEIN 16-AUG-12 4GMQ . COMPND 2 MOLECULE: PUTATIVE RIBOSOME ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM VAR. THERMOPHI . AUTHOR J.KOPP,G.BANGE,I.SINNING . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5460.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 77.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 53 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 355 A N > 0 0 123 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0-169.5 -4.4 -8.8 23.6 2 356 A A H > + 0 0 65 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.920 360.0 48.7 -60.2 -45.7 -2.6 -6.6 21.1 3 357 A V H > S+ 0 0 37 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.888 110.4 52.7 -67.3 -33.0 -3.7 -3.3 22.7 4 358 A K H > S+ 0 0 99 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.944 113.2 43.7 -61.5 -48.2 -2.7 -4.5 26.1 5 359 A K H X S+ 0 0 131 -4,-2.4 4,-1.6 1,-0.2 -2,-0.2 0.889 113.9 50.9 -64.3 -39.2 0.8 -5.4 24.8 6 360 A N H X S+ 0 0 37 -4,-2.8 4,-2.1 1,-0.2 -2,-0.2 0.894 106.5 52.9 -71.3 -37.3 1.1 -2.2 22.9 7 361 A K H X S+ 0 0 65 -4,-2.6 4,-2.7 1,-0.2 5,-0.3 0.871 105.8 55.9 -62.5 -35.0 0.1 -0.0 25.9 8 362 A R H X S+ 0 0 155 -4,-1.6 4,-2.8 2,-0.2 -1,-0.2 0.897 105.3 51.9 -62.2 -39.8 2.9 -1.8 27.8 9 363 A V H X S+ 0 0 38 -4,-1.6 4,-1.7 2,-0.2 -2,-0.2 0.936 110.9 48.3 -60.3 -46.1 5.3 -0.8 25.1 10 364 A L H X S+ 0 0 0 -4,-2.1 4,-0.8 2,-0.2 3,-0.2 0.956 116.4 40.7 -58.9 -52.5 4.2 2.9 25.5 11 365 A R H >X S+ 0 0 97 -4,-2.7 4,-0.9 1,-0.2 3,-0.5 0.891 114.4 53.3 -67.7 -37.8 4.4 2.9 29.3 12 366 A G H 3X S+ 0 0 37 -4,-2.8 4,-2.4 -5,-0.3 -1,-0.2 0.806 96.4 68.8 -64.7 -30.0 7.7 1.0 29.3 13 367 A S H 3X S+ 0 0 9 -4,-1.7 4,-1.7 -3,-0.2 -1,-0.2 0.868 97.7 49.6 -62.2 -37.0 9.3 3.4 26.9 14 368 A V H <<>S+ 0 0 0 -4,-0.8 5,-3.2 -3,-0.5 6,-0.3 0.840 110.3 50.3 -76.2 -28.1 9.4 6.2 29.4 15 369 A K H ><5S+ 0 0 141 -4,-0.9 3,-1.8 3,-0.2 -2,-0.2 0.898 108.0 53.5 -70.3 -39.4 11.0 4.0 32.0 16 370 A E H 3<5S+ 0 0 118 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.879 108.4 51.2 -56.6 -38.0 13.6 2.9 29.4 17 371 A A T ><5S- 0 0 3 -4,-1.7 3,-1.8 -5,-0.2 4,-0.3 0.308 115.8-118.9 -80.6 7.1 14.3 6.6 29.0 18 372 A N G X 5 - 0 0 63 -3,-1.8 3,-1.6 1,-0.3 -3,-0.2 0.848 64.8 -67.1 52.2 36.5 14.7 7.1 32.8 19 373 A Y G 3 - 0 0 58 -2,-0.2 4,-2.6 1,-0.1 5,-0.2 -0.308 21.6-108.6 -74.8 162.9 11.9 11.5 41.8 27 381 A A H > S+ 0 0 83 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.886 122.0 53.3 -56.3 -40.4 8.3 10.4 42.6 28 382 A A H > S+ 0 0 71 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.905 109.4 47.4 -64.0 -42.1 7.2 13.8 41.2 29 383 A T H > S+ 0 0 41 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.931 113.1 48.1 -64.4 -47.4 9.0 13.2 38.0 30 384 A I H X S+ 0 0 52 -4,-2.6 4,-2.7 1,-0.2 5,-0.3 0.934 112.9 48.7 -58.0 -47.6 7.7 9.7 37.5 31 385 A D H X S+ 0 0 92 -4,-2.7 4,-2.5 -5,-0.2 5,-0.2 0.927 112.1 48.8 -58.6 -47.7 4.1 10.9 38.3 32 386 A A H X S+ 0 0 19 -4,-2.4 4,-1.7 2,-0.2 58,-0.3 0.925 115.2 42.6 -60.9 -47.6 4.4 13.8 35.8 33 387 A V H X S+ 0 0 3 -4,-2.5 4,-2.3 2,-0.2 -2,-0.2 0.944 117.4 44.9 -68.2 -47.7 5.7 11.7 33.0 34 388 A L H X S+ 0 0 47 -4,-2.7 4,-2.8 -5,-0.2 -2,-0.2 0.841 109.6 56.2 -68.5 -31.6 3.4 8.7 33.4 35 389 A N H X S+ 0 0 71 -4,-2.5 4,-2.3 -5,-0.3 -1,-0.2 0.912 109.2 48.0 -61.6 -40.9 0.4 11.0 33.9 36 390 A D H X S+ 0 0 3 -4,-1.7 4,-2.5 -5,-0.2 -2,-0.2 0.924 111.8 48.9 -64.3 -45.3 1.2 12.5 30.5 37 391 A V H X S+ 0 0 0 -4,-2.3 4,-2.5 1,-0.2 -2,-0.2 0.936 111.8 49.3 -59.3 -47.2 1.6 9.1 28.9 38 392 A D H X S+ 0 0 59 -4,-2.8 4,-2.0 2,-0.2 -1,-0.2 0.899 110.2 51.3 -58.4 -43.0 -1.7 8.0 30.4 39 393 A L H X S+ 0 0 53 -4,-2.3 4,-0.7 2,-0.2 -2,-0.2 0.941 109.4 49.1 -64.1 -45.7 -3.5 11.1 29.1 40 394 A V H >X S+ 0 0 0 -4,-2.5 3,-1.9 1,-0.2 4,-0.6 0.950 108.8 54.4 -56.0 -47.4 -2.1 10.5 25.6 41 395 A I H >< S+ 0 0 15 -4,-2.5 3,-1.2 1,-0.3 -1,-0.2 0.878 101.6 57.8 -56.8 -38.8 -3.3 6.9 25.8 42 396 A T H 3< S+ 0 0 102 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.682 105.9 52.1 -65.5 -15.1 -6.9 8.0 26.7 43 397 A K H << S+ 0 0 87 -3,-1.9 2,-0.3 -4,-0.7 -1,-0.2 0.539 101.2 70.4 -96.7 -9.8 -7.0 10.1 23.5 44 398 A I << - 0 0 14 -3,-1.2 2,-0.1 -4,-0.6 32,-0.0 -0.867 69.5-132.9-120.8 146.3 -6.0 7.4 21.0 45 399 A D > - 0 0 84 -2,-0.3 4,-2.7 1,-0.1 5,-0.2 -0.221 41.1 -89.6 -86.6 178.6 -7.6 4.2 19.6 46 400 A A H > S+ 0 0 54 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.863 126.4 50.7 -60.7 -37.9 -6.1 0.7 19.3 47 401 A D H > S+ 0 0 130 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.919 112.5 46.3 -64.5 -43.9 -4.8 1.4 15.8 48 402 A E H > S+ 0 0 35 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.882 111.3 52.4 -66.6 -38.7 -3.1 4.6 16.9 49 403 A I H X S+ 0 0 7 -4,-2.7 4,-2.7 2,-0.2 -2,-0.2 0.923 109.8 49.3 -61.8 -43.7 -1.7 2.9 20.0 50 404 A A H X S+ 0 0 39 -4,-2.4 4,-2.4 2,-0.2 -2,-0.2 0.923 110.6 49.7 -61.2 -46.3 -0.2 0.1 17.8 51 405 A A H X S+ 0 0 49 -4,-2.3 4,-1.4 2,-0.2 -1,-0.2 0.921 113.4 45.7 -60.4 -45.3 1.4 2.7 15.4 52 406 A L H X S+ 0 0 2 -4,-2.3 4,-1.6 1,-0.2 3,-0.3 0.920 110.7 52.9 -66.5 -42.9 3.0 4.6 18.3 53 407 A A H X S+ 0 0 2 -4,-2.7 4,-2.3 1,-0.2 3,-0.2 0.910 105.9 55.1 -57.7 -40.8 4.2 1.4 20.0 54 408 A G H < S+ 0 0 54 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.848 107.6 49.2 -61.9 -35.3 5.9 0.4 16.7 55 409 A K H < S+ 0 0 119 -4,-1.4 -1,-0.2 -3,-0.3 -2,-0.2 0.794 117.0 41.3 -73.0 -29.0 7.8 3.7 16.6 56 410 A L H >< S+ 0 0 5 -4,-1.6 3,-2.0 -3,-0.2 -2,-0.2 0.723 86.2 114.0 -88.6 -25.4 8.9 3.2 20.2 57 411 A N T 3< S+ 0 0 109 -4,-2.3 3,-0.1 1,-0.3 -47,-0.0 -0.242 88.8 2.0 -59.2 125.4 9.7 -0.5 20.1 58 412 A G T 3 S+ 0 0 65 1,-0.3 -1,-0.3 2,-0.0 2,-0.1 0.315 89.7 140.4 85.6 -9.8 13.4 -1.2 20.6 59 413 A L < + 0 0 34 -3,-2.0 -1,-0.3 1,-0.1 -43,-0.0 -0.453 21.6 173.3 -69.1 140.4 14.5 2.5 21.1 60 414 A T + 0 0 99 -2,-0.1 2,-0.6 -3,-0.1 -1,-0.1 0.566 48.7 94.1-119.7 -21.3 17.2 2.9 23.7 61 415 A V >> - 0 0 75 1,-0.2 4,-2.4 2,-0.0 3,-0.5 -0.678 64.2-148.5 -85.9 118.4 18.1 6.5 23.5 62 416 A A H 3> S+ 0 0 32 -2,-0.6 4,-2.6 1,-0.3 5,-0.2 0.891 97.4 49.7 -53.1 -45.6 16.1 8.7 25.9 63 417 A D H 3> S+ 0 0 123 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.841 110.6 51.0 -64.5 -33.0 16.1 11.8 23.6 64 418 A E H <> S+ 0 0 94 -3,-0.5 4,-1.8 2,-0.2 -1,-0.2 0.906 109.9 49.2 -71.9 -41.7 14.9 9.6 20.7 65 419 A I H X S+ 0 0 0 -4,-2.4 4,-2.0 1,-0.2 -2,-0.2 0.934 111.0 50.9 -58.7 -45.4 12.1 8.2 22.8 66 420 A K H X S+ 0 0 30 -4,-2.6 4,-2.8 -5,-0.2 -2,-0.2 0.906 106.8 54.4 -61.8 -39.2 11.2 11.7 23.8 67 421 A N H X S+ 0 0 93 -4,-2.1 4,-2.2 2,-0.2 -1,-0.2 0.871 105.4 52.6 -63.2 -36.7 11.1 12.8 20.2 68 422 A V H X S+ 0 0 24 -4,-1.8 4,-2.1 2,-0.2 -1,-0.2 0.930 111.5 46.7 -63.6 -44.0 8.7 10.1 19.3 69 423 A W H X S+ 0 0 0 -4,-2.0 4,-2.8 2,-0.2 -2,-0.2 0.918 110.6 51.9 -64.0 -42.0 6.4 11.2 22.1 70 424 A K H X S+ 0 0 69 -4,-2.8 4,-2.4 1,-0.2 -1,-0.2 0.900 108.9 51.5 -59.5 -41.0 6.7 14.9 21.0 71 425 A E H X S+ 0 0 131 -4,-2.2 4,-2.0 2,-0.2 -1,-0.2 0.930 111.3 46.8 -62.2 -45.4 5.8 13.9 17.5 72 426 A E H X S+ 0 0 17 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.909 110.9 51.6 -65.4 -42.2 2.7 12.1 18.7 73 427 A V H X S+ 0 0 13 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.925 109.3 50.7 -60.9 -42.0 1.6 15.0 21.0 74 428 A S H X S+ 0 0 79 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.878 109.0 51.7 -63.3 -37.7 2.0 17.4 18.0 75 429 A R H X S+ 0 0 92 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.936 112.7 45.9 -61.9 -44.7 -0.2 15.1 15.9 76 430 A L H <>S+ 0 0 0 -4,-2.4 5,-2.7 2,-0.2 6,-1.1 0.865 111.3 50.6 -69.2 -37.6 -2.9 15.1 18.7 77 431 A V H ><5S+ 0 0 55 -4,-2.7 3,-1.5 4,-0.2 -1,-0.2 0.942 111.7 48.7 -63.5 -45.1 -2.7 18.9 19.3 78 432 A G H 3<5S+ 0 0 72 -4,-2.3 -2,-0.2 1,-0.3 -1,-0.2 0.800 108.1 54.5 -63.8 -29.9 -3.2 19.4 15.5 79 433 A A T 3<5S- 0 0 56 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.493 116.5-116.7 -80.2 -6.0 -6.1 17.0 15.5 80 434 A G T < 5S+ 0 0 41 -3,-1.5 -3,-0.2 -4,-0.3 -2,-0.1 0.642 86.5 116.0 78.2 17.0 -7.7 19.0 18.2 81 435 A K S > - 0 0 133 -2,-0.3 3,-2.5 -3,-0.1 4,-0.5 -0.808 36.0 -97.0-107.3 157.7 -4.6 21.5 23.9 84 438 A E G >4 S+ 0 0 179 -2,-0.3 3,-0.6 1,-0.3 -7,-0.1 0.785 119.4 38.3 -39.6 -55.0 -1.2 23.1 24.4 85 439 A G G 34 S+ 0 0 72 1,-0.2 -1,-0.3 -3,-0.0 3,-0.0 0.398 91.0 90.2 -85.1 3.6 -0.9 22.9 28.1 86 440 A D G <4 S+ 0 0 75 -3,-2.5 2,-0.5 1,-0.1 -1,-0.2 0.902 88.4 47.9 -64.7 -42.1 -2.4 19.5 28.6 87 441 A I << + 0 0 11 -3,-0.6 -1,-0.1 -4,-0.5 -5,-0.0 -0.896 66.5 156.7-106.5 129.9 0.9 17.7 28.2 88 442 A K > + 0 0 101 -2,-0.5 3,-1.2 -56,-0.2 4,-0.4 0.713 64.6 24.9-113.9 -86.6 3.8 19.1 30.3 89 443 A A G > S+ 0 0 29 1,-0.3 3,-1.2 2,-0.2 -56,-0.1 0.815 111.3 67.3 -60.3 -35.3 6.8 17.0 31.3 90 444 A L G 3 S+ 0 0 0 -58,-0.3 -1,-0.3 1,-0.3 -20,-0.2 0.776 112.5 30.3 -63.7 -26.3 6.5 14.5 28.4 91 445 A V G < 0 0 47 -3,-1.2 -1,-0.3 -22,-0.1 -2,-0.2 0.241 360.0 360.0-118.3 12.2 7.4 17.2 25.8 92 446 A A < 0 0 84 -3,-1.2 -22,-0.1 -4,-0.4 -3,-0.0 -0.276 360.0 360.0 -62.1 360.0 9.7 19.5 27.7