==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 15-OCT-01 1GO1 . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; . AUTHOR S.-H.CHAN,M.BYCROFT,S.M.V.FREUND,K.-B.WONG . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6608.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 73 71.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 10.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 35.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 114 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 72.4 10.7 7.5 -14.3 2 -1 A S - 0 0 128 1,-0.2 2,-0.3 2,-0.1 0, 0.0 0.855 360.0-164.5 53.0 42.2 12.4 4.2 -13.3 3 1 A V - 0 0 72 1,-0.1 -1,-0.2 95,-0.1 3,-0.1 -0.416 11.7-156.8 -60.7 116.4 10.8 4.4 -9.8 4 2 A D + 0 0 112 -2,-0.3 2,-1.9 1,-0.2 -1,-0.1 0.933 17.4 176.6 -61.3 -49.9 12.8 1.9 -7.6 5 3 A F > + 0 0 11 1,-0.2 4,-2.2 89,-0.1 -1,-0.2 -0.224 64.2 78.0 73.3 -47.2 9.9 1.4 -5.0 6 4 A A H > S+ 0 0 23 -2,-1.9 4,-2.2 2,-0.2 5,-0.2 0.930 95.3 44.9 -56.7 -50.7 11.9 -1.3 -3.0 7 5 A F H > S+ 0 0 114 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.869 112.8 52.9 -61.7 -38.9 14.2 1.4 -1.2 8 6 A E H > S+ 0 0 34 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.871 110.0 47.7 -65.2 -39.9 11.0 3.5 -0.5 9 7 A L H X S+ 0 0 1 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.937 114.9 43.7 -68.4 -48.2 9.1 0.5 1.1 10 8 A R H X S+ 0 0 145 -4,-2.2 4,-1.7 1,-0.2 -2,-0.2 0.881 117.0 47.3 -65.1 -37.2 12.1 -0.6 3.4 11 9 A K H X>S+ 0 0 68 -4,-2.2 4,-2.4 -5,-0.2 5,-0.6 0.868 113.2 49.1 -69.8 -37.6 12.8 3.2 4.3 12 10 A A H X5S+ 0 0 0 -4,-2.0 4,-0.6 3,-0.2 -2,-0.2 0.850 114.2 44.9 -69.6 -37.0 9.0 3.7 5.1 13 11 A Q H <5S+ 0 0 76 -4,-2.2 5,-0.2 2,-0.1 -2,-0.2 0.810 119.0 42.1 -76.3 -33.1 8.7 0.6 7.3 14 12 A D H <5S+ 0 0 145 -4,-1.7 -2,-0.2 -5,-0.2 -3,-0.2 0.911 130.6 22.8 -79.8 -48.1 12.0 1.3 9.2 15 13 A T H <5S+ 0 0 71 -4,-2.4 -3,-0.2 -5,-0.2 -2,-0.1 0.929 134.1 18.0 -84.8 -54.3 11.6 5.2 9.7 16 14 A G S < - 0 0 23 63,-2.6 4,-1.1 -2,-0.4 65,-0.1 -0.504 66.6-123.3 148.3 144.1 -2.9 -6.8 5.1 22 20 A A H > S+ 0 0 27 2,-0.2 4,-0.7 -2,-0.2 -1,-0.1 0.919 113.4 39.3 -73.0 -47.3 -6.0 -7.0 2.8 23 21 A R H > S+ 0 0 212 1,-0.2 4,-1.4 2,-0.2 3,-0.3 0.843 114.6 53.7 -72.1 -36.3 -8.6 -6.6 5.5 24 22 A K H > S+ 0 0 126 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.825 102.1 59.2 -68.7 -32.1 -6.5 -4.0 7.6 25 23 A S H X S+ 0 0 0 -4,-1.1 4,-1.2 1,-0.2 -1,-0.2 0.819 105.6 49.4 -65.6 -31.5 -6.2 -1.7 4.5 26 24 A I H X S+ 0 0 25 -4,-0.7 4,-1.9 -3,-0.3 -1,-0.2 0.893 108.6 52.2 -73.5 -42.1 -10.1 -1.5 4.3 27 25 A Q H X S+ 0 0 121 -4,-1.4 4,-1.5 1,-0.2 5,-0.2 0.886 111.3 46.6 -61.5 -41.3 -10.4 -0.6 8.1 28 26 A Y H X>S+ 0 0 67 -4,-1.8 4,-1.9 1,-0.2 5,-1.7 0.835 112.9 50.1 -70.4 -32.6 -7.8 2.3 7.7 29 27 A A H <5S+ 0 0 0 -4,-1.2 -2,-0.2 3,-0.2 -1,-0.2 0.804 106.2 57.6 -73.7 -31.3 -9.6 3.6 4.5 30 28 A K H <5S+ 0 0 134 -4,-1.9 -2,-0.2 1,-0.1 -1,-0.2 0.945 118.8 27.5 -63.5 -53.6 -13.1 3.5 6.3 31 29 A M H <5S- 0 0 143 -4,-1.5 -2,-0.2 2,-0.0 -1,-0.1 0.845 109.6-118.2 -79.5 -37.6 -12.1 5.9 9.2 32 30 A G T <5 + 0 0 46 -4,-1.9 -3,-0.2 -5,-0.2 -4,-0.1 0.889 64.8 135.4 97.5 56.4 -9.4 7.9 7.3 33 31 A G < + 0 0 34 -5,-1.7 2,-0.3 27,-0.0 -4,-0.1 -0.208 45.7 90.1-126.1 41.6 -6.0 7.3 9.1 34 32 A A - 0 0 16 -6,-0.2 54,-0.3 1,-0.1 3,-0.1 -0.996 52.2-159.7-140.0 143.3 -3.6 6.6 6.1 35 33 A K S S+ 0 0 122 52,-2.0 2,-0.3 -2,-0.3 53,-0.2 0.918 84.4 4.2 -84.3 -51.3 -1.4 8.8 3.9 36 34 A L E -B 87 0A 0 51,-2.1 51,-3.2 24,-0.1 2,-0.5 -0.993 62.0-157.0-140.9 131.4 -0.9 6.4 0.9 37 35 A I E -Bc 86 62A 0 24,-2.3 26,-2.1 -2,-0.3 2,-0.5 -0.938 10.0-160.7-112.7 116.7 -2.5 2.9 0.2 38 36 A I E -Bc 85 63A 0 47,-2.2 47,-2.7 -2,-0.5 2,-0.4 -0.841 7.7-168.2 -98.5 128.0 -0.6 0.6 -2.2 39 37 A V E -Bc 84 64A 1 24,-2.0 26,-2.9 -2,-0.5 2,-0.3 -0.952 21.4-122.6-119.0 136.1 -2.6 -2.4 -3.8 40 38 A A E > - c 0 65A 0 43,-2.8 3,-1.4 -2,-0.4 26,-0.1 -0.597 11.2-143.7 -77.7 130.6 -1.1 -5.4 -5.8 41 39 A R T 3 S+ 0 0 145 24,-1.2 -1,-0.1 -2,-0.3 27,-0.1 0.787 101.6 55.6 -63.2 -29.5 -2.5 -5.8 -9.4 42 40 A N T 3 S+ 0 0 109 25,-0.3 -1,-0.2 23,-0.1 26,-0.1 0.461 90.6 102.5 -82.8 -1.8 -2.4 -9.6 -9.0 43 41 A A S < S- 0 0 14 -3,-1.4 39,-0.0 40,-0.2 -4,-0.0 -0.117 88.7 -66.3 -73.7 175.2 -4.6 -9.5 -5.8 44 42 A R > - 0 0 174 1,-0.1 4,-2.0 4,-0.0 5,-0.2 -0.322 38.4-130.4 -63.8 145.0 -8.4 -10.3 -5.7 45 43 A P H > S+ 0 0 95 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.879 108.2 51.8 -64.2 -39.3 -10.9 -7.9 -7.6 46 44 A D H > S+ 0 0 108 2,-0.2 4,-1.5 1,-0.2 5,-0.1 0.820 110.9 48.6 -67.1 -31.6 -13.3 -7.5 -4.5 47 45 A I H > S+ 0 0 37 2,-0.2 4,-2.0 3,-0.1 5,-0.2 0.922 115.5 42.7 -72.9 -46.5 -10.2 -6.5 -2.3 48 46 A K H X S+ 0 0 37 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.893 117.1 46.6 -66.4 -43.5 -8.8 -3.9 -4.8 49 47 A E H X S+ 0 0 147 -4,-2.5 4,-2.3 2,-0.2 5,-0.2 0.846 113.1 49.0 -69.2 -36.1 -12.3 -2.4 -5.6 50 48 A D H X S+ 0 0 58 -4,-1.5 4,-2.3 -5,-0.2 5,-0.2 0.930 115.2 43.0 -69.7 -46.1 -13.4 -2.2 -1.9 51 49 A I H X S+ 0 0 0 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.899 117.9 46.3 -66.0 -42.1 -10.1 -0.5 -0.7 52 50 A E H X S+ 0 0 60 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.913 115.4 45.3 -67.0 -44.5 -10.1 1.9 -3.8 53 51 A Y H X S+ 0 0 157 -4,-2.3 4,-1.4 2,-0.2 -2,-0.2 0.911 118.1 42.8 -65.3 -45.5 -13.9 2.8 -3.4 54 52 A Y H X S+ 0 0 81 -4,-2.3 4,-1.2 1,-0.2 -2,-0.2 0.842 116.8 47.6 -70.3 -34.9 -13.6 3.4 0.4 55 53 A A H X>S+ 0 0 0 -4,-2.1 5,-2.7 -5,-0.2 4,-1.9 0.805 106.8 58.5 -75.2 -31.6 -10.2 5.3 0.0 56 54 A R H <5S+ 0 0 199 -4,-1.9 -2,-0.2 3,-0.2 -1,-0.2 0.933 110.8 39.2 -63.0 -51.1 -11.6 7.6 -2.9 57 55 A L H <5S+ 0 0 123 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.824 116.6 50.7 -70.7 -34.1 -14.6 9.1 -0.8 58 56 A S H <5S- 0 0 50 -4,-1.2 -2,-0.2 -5,-0.2 -1,-0.2 0.864 117.5-108.4 -72.4 -37.4 -12.5 9.4 2.5 59 57 A G T <5S+ 0 0 63 -4,-1.9 -3,-0.2 1,-0.2 -2,-0.1 0.759 70.8 131.9 110.9 42.1 -9.6 11.3 0.7 60 58 A I < - 0 0 10 -5,-2.7 -1,-0.2 -8,-0.1 -24,-0.1 -0.983 52.2-127.4-125.0 117.9 -6.6 8.8 0.6 61 59 A P - 0 0 35 0, 0.0 -24,-2.3 0, 0.0 2,-0.4 -0.357 20.8-146.8 -65.7 142.1 -4.6 8.3 -2.8 62 60 A V E -c 37 0A 34 -26,-0.2 2,-0.5 -10,-0.1 -24,-0.2 -0.910 5.3-156.9-112.4 138.5 -4.2 4.6 -4.0 63 61 A Y E -c 38 0A 30 -26,-2.1 -24,-2.0 -2,-0.4 2,-0.6 -0.957 13.0-140.1-119.2 116.6 -1.1 3.3 -5.9 64 62 A E E -c 39 0A 103 -2,-0.5 -24,-0.2 -26,-0.2 2,-0.2 -0.634 25.5-131.1 -75.4 112.1 -1.5 0.2 -8.2 65 63 A F E -c 40 0A 19 -26,-2.9 2,-1.6 -2,-0.6 -24,-1.2 -0.460 8.4-132.6 -67.8 131.4 1.7 -1.9 -7.7 66 64 A E S S+ 0 0 143 -2,-0.2 2,-0.2 -26,-0.1 -1,-0.1 -0.583 81.1 30.9 -86.6 75.2 3.5 -3.0 -10.9 67 65 A G S S- 0 0 16 -2,-1.6 -25,-0.3 4,-0.0 2,-0.3 -0.815 92.8 -59.0 178.1-136.5 4.0 -6.7 -10.0 68 66 A T > - 0 0 37 -2,-0.2 4,-2.3 -27,-0.1 5,-0.1 -0.904 37.9-108.3-138.0 166.1 2.4 -9.5 -7.8 69 67 A S H > S+ 0 0 16 -2,-0.3 4,-2.2 2,-0.2 13,-1.5 0.804 119.2 55.5 -64.2 -29.8 1.4 -10.3 -4.2 70 68 A V H > S+ 0 0 88 11,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.934 111.3 42.3 -68.0 -47.4 4.4 -12.8 -4.0 71 69 A E H > S+ 0 0 126 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.870 114.7 51.8 -66.9 -38.2 7.0 -10.1 -5.0 72 70 A L H X S+ 0 0 0 -4,-2.3 4,-2.2 10,-0.2 6,-0.2 0.915 113.2 44.4 -64.8 -43.9 5.3 -7.5 -2.7 73 71 A G H X>S+ 0 0 0 -4,-2.2 5,-1.5 2,-0.2 4,-1.4 0.937 115.4 46.4 -65.7 -47.9 5.5 -9.8 0.3 74 72 A T H <5S+ 0 0 107 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.842 113.9 50.8 -61.7 -36.1 9.1 -11.0 -0.4 75 73 A L H <5S+ 0 0 46 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.892 109.2 48.8 -69.8 -42.6 10.1 -7.2 -0.9 76 74 A L H <5S- 0 0 13 -4,-2.2 -1,-0.2 2,-0.2 -2,-0.2 0.763 119.9-108.3 -67.8 -28.1 8.5 -6.0 2.4 77 75 A G T <5S+ 0 0 66 -4,-1.4 -3,-0.2 1,-0.4 -4,-0.1 0.313 81.0 120.7 113.9 -3.8 10.3 -8.9 4.3 78 76 A R < - 0 0 122 -5,-1.5 -1,-0.4 -6,-0.2 -2,-0.2 -0.760 58.1-145.3 -93.0 136.8 7.2 -11.1 5.1 79 77 A P S S+ 0 0 122 0, 0.0 2,-0.2 0, 0.0 -5,-0.1 0.564 78.0 86.3 -76.4 -6.4 7.1 -14.8 3.7 80 78 A H S S- 0 0 127 -7,-0.2 2,-0.6 1,-0.1 -2,-0.1 -0.534 93.6 -96.9 -91.2 159.4 3.3 -14.5 3.2 81 79 A T - 0 0 90 -2,-0.2 2,-0.6 -8,-0.1 -11,-0.2 -0.678 36.5-151.0 -80.3 113.7 1.6 -13.1 -0.0 82 80 A V + 0 0 11 -13,-1.5 -10,-0.2 -2,-0.6 -9,-0.2 -0.780 19.0 177.6 -89.7 119.7 0.6 -9.4 0.6 83 81 A S + 0 0 26 -2,-0.6 -43,-2.8 1,-0.3 2,-0.3 0.842 69.7 0.9 -86.5 -39.8 -2.5 -8.2 -1.4 84 82 A A E - B 0 39A 0 -45,-0.2 -63,-2.6 -15,-0.0 2,-0.3 -0.993 58.8-164.7-152.0 149.0 -2.6 -4.6 -0.0 85 83 A L E -AB 20 38A 0 -47,-2.7 -47,-2.2 -2,-0.3 2,-0.6 -0.999 12.7-144.5-138.4 138.0 -0.7 -2.3 2.4 86 84 A A E -AB 19 37A 0 -67,-2.5 -67,-2.3 -2,-0.3 2,-0.8 -0.909 10.0-151.4-107.4 114.7 -1.6 1.1 4.1 87 85 A V E +AB 18 36A 0 -51,-3.2 -51,-2.1 -2,-0.6 -52,-2.0 -0.759 20.4 172.0 -86.2 107.4 1.2 3.6 4.6 88 86 A V E S+ 0 0 42 -71,-1.1 -1,-0.2 -2,-0.8 -70,-0.1 0.918 72.2 22.7 -80.9 -50.4 0.3 5.8 7.7 89 87 A D E -A 17 0A 93 -72,-1.0 -72,-1.5 -77,-0.1 -1,-0.3 -0.965 59.5-171.8-124.1 112.8 3.5 7.8 8.1 90 88 A P > + 0 0 17 0, 0.0 3,-1.0 0, 0.0 2,-0.5 0.939 25.8 165.5 -67.0 -47.2 6.0 8.2 5.0 91 89 A G T 3 - 0 0 50 1,-0.2 -79,-0.1 -76,-0.1 -80,-0.0 -0.575 68.4 -9.4 73.3-118.0 8.8 9.8 7.1 92 90 A E T 3 S+ 0 0 136 -2,-0.5 -1,-0.2 -81,-0.3 -80,-0.1 0.776 114.1 93.5 -85.0 -32.7 12.2 9.9 5.1 93 91 A S S < S- 0 0 11 -3,-1.0 2,-0.7 -82,-0.2 3,-0.3 -0.299 74.6-133.2 -65.0 147.5 11.0 7.7 2.1 94 92 A R + 0 0 191 1,-0.2 3,-0.4 2,-0.1 4,-0.3 -0.436 58.9 134.4 -97.4 55.6 9.6 9.3 -1.1 95 93 A I >> + 0 0 0 -2,-0.7 3,-1.0 1,-0.2 4,-0.6 0.803 62.7 64.1 -74.2 -31.0 6.6 6.9 -1.3 96 94 A L H 3> S+ 0 0 71 -3,-0.3 4,-2.2 1,-0.2 3,-0.3 0.713 92.1 64.9 -66.2 -22.8 4.0 9.8 -2.0 97 95 A A H 34 S+ 0 0 88 -3,-0.4 -1,-0.2 1,-0.2 -2,-0.2 0.722 92.6 62.9 -72.9 -22.5 5.8 10.5 -5.4 98 96 A L H <4 S- 0 0 23 -3,-1.0 -1,-0.2 -4,-0.3 -2,-0.2 0.825 137.3 -25.3 -72.0 -33.9 4.8 7.0 -6.8 99 97 A G H < S+ 0 0 16 -4,-0.6 2,-0.6 -3,-0.3 -2,-0.2 0.138 89.5 128.5-174.4 40.7 1.0 7.8 -6.7 100 98 A G S < S- 0 0 22 -4,-2.2 -4,-0.1 1,-0.3 -37,-0.1 -0.482 84.9 -70.6-102.8 58.5 0.1 10.4 -4.0 101 99 A K 0 0 154 -2,-0.6 -1,-0.3 -39,-0.1 -2,-0.1 0.449 360.0 360.0 67.4 149.7 -2.0 12.7 -6.3 102 100 A E 0 0 211 -3,-0.1 -1,-0.0 0, 0.0 -2,-0.0 0.527 360.0 360.0-139.5 360.0 -0.6 14.9 -9.2