==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RECOMBINATION, REPLICATION 19-MAR-09 3GOE . COMPND 2 MOLECULE: DNA REPAIR PROTEIN RAD60; . SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; . AUTHOR J.J.P.PERRY . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5820.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 61.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 20.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A H > 0 0 204 0, 0.0 3,-1.1 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0 162.1 11.8 52.6 38.6 2 2 A H T 3 + 0 0 181 1,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.412 360.0 3.8 -45.9 129.8 9.8 55.6 39.8 3 3 A H T 3 S+ 0 0 136 1,-0.2 -1,-0.3 2,-0.0 2,-0.2 0.868 92.6 178.5 56.9 45.1 11.1 58.7 38.1 4 4 A H < - 0 0 105 -3,-1.1 -1,-0.2 1,-0.1 -2,-0.0 -0.486 27.2-151.5 -85.5 156.7 13.5 56.9 35.9 5 5 A H + 0 0 126 -2,-0.2 -1,-0.1 0, 0.0 2,-0.1 0.321 43.4 136.2-106.5 -0.8 15.7 58.6 33.4 6 6 A H + 0 0 146 1,-0.1 -2,-0.1 20,-0.0 3,-0.0 -0.372 24.5 178.8 -59.5 133.0 16.3 56.0 30.8 7 7 A K + 0 0 129 -2,-0.1 20,-2.7 19,-0.1 21,-0.4 0.670 49.0 72.4-104.9 -28.5 16.0 57.3 27.2 8 8 A L E -A 26 0A 91 18,-0.2 2,-0.3 19,-0.1 64,-0.1 -0.744 43.9-175.5-106.6 146.4 16.8 54.4 24.9 9 9 A I E -A 25 0A 22 16,-2.1 16,-2.5 -2,-0.3 2,-0.5 -0.969 27.5-126.9-123.8 151.8 15.2 51.2 23.8 10 10 A T E -A 24 0A 39 -2,-0.3 63,-3.0 14,-0.2 64,-0.5 -0.849 30.3-176.5 -93.4 132.6 16.9 48.6 21.5 11 11 A L E -A 23 0A 1 12,-2.7 12,-2.5 -2,-0.5 2,-0.6 -0.977 22.8-139.0-129.1 142.8 14.9 47.6 18.4 12 12 A L E -Ab 22 75A 24 62,-2.3 64,-2.6 -2,-0.4 2,-0.7 -0.898 16.9-162.1 -98.7 119.3 15.6 45.2 15.6 13 13 A L E -Ab 21 76A 0 8,-3.0 8,-2.4 -2,-0.6 2,-0.4 -0.920 7.7-166.8-103.6 110.7 14.7 46.5 12.2 14 14 A R E - b 0 77A 118 62,-2.8 64,-3.1 -2,-0.7 2,-0.4 -0.797 5.5-175.1 -96.2 139.3 14.3 43.7 9.7 15 15 A S E - b 0 78A 12 3,-0.4 3,-0.3 -2,-0.4 5,-0.1 -0.993 24.3-157.7-139.9 129.3 14.2 44.5 6.0 16 16 A S S S+ 0 0 123 62,-0.6 -1,-0.1 -2,-0.4 63,-0.1 0.717 100.7 34.1 -77.1 -20.9 13.6 42.2 3.0 17 17 A K S S+ 0 0 169 61,-0.3 2,-0.3 2,-0.1 -1,-0.2 0.291 122.8 31.8-114.4 4.2 15.2 44.6 0.6 18 18 A S S S- 0 0 25 -3,-0.3 -3,-0.4 60,-0.1 2,-0.1 -0.931 97.4 -58.3-153.5 177.5 17.9 46.3 2.8 19 19 A E - 0 0 123 -2,-0.3 -3,-0.1 23,-0.2 -2,-0.1 -0.373 50.0-126.2 -66.3 128.9 20.4 45.6 5.6 20 20 A D - 0 0 77 -2,-0.1 2,-0.3 -5,-0.1 -6,-0.2 -0.422 32.8-165.3 -67.8 154.9 18.8 44.6 8.9 21 21 A L E -A 13 0A 28 -8,-2.4 -8,-3.0 -2,-0.0 2,-0.5 -0.961 24.7-148.9-149.8 134.3 19.8 46.8 11.8 22 22 A R E -A 12 0A 138 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.884 32.3-178.4 -97.9 121.9 19.7 46.7 15.5 23 23 A L E -A 11 0A 12 -12,-2.5 -12,-2.7 -2,-0.5 2,-0.6 -0.923 27.6-148.1-123.3 148.3 19.4 50.4 16.8 24 24 A S E +A 10 0A 67 -2,-0.3 -14,-0.2 -14,-0.2 -16,-0.0 -0.963 36.2 171.8-115.9 108.9 19.2 51.9 20.3 25 25 A I E -A 9 0A 1 -16,-2.5 -16,-2.1 -2,-0.6 2,-0.2 -0.872 36.9 -99.0-126.4 151.9 17.0 54.9 19.9 26 26 A P E > -A 8 0A 26 0, 0.0 3,-1.8 0, 0.0 39,-0.3 -0.474 24.5-135.8 -65.2 137.7 15.4 57.5 22.2 27 27 A V T 3 S+ 0 0 32 -20,-2.7 39,-2.7 1,-0.3 40,-0.3 0.685 103.3 65.1 -73.2 -10.5 11.8 56.9 22.9 28 28 A D T 3 S+ 0 0 101 -21,-0.4 -1,-0.3 37,-0.2 2,-0.1 0.566 81.7 100.0 -85.4 -5.4 11.1 60.6 22.4 29 29 A F S < S- 0 0 44 -3,-1.8 36,-3.1 35,-0.1 37,-0.3 -0.498 77.7-120.4 -65.8 151.4 12.0 60.1 18.7 30 30 A T B > -E 64 0B 33 34,-0.3 4,-2.3 -2,-0.1 34,-0.3 -0.377 24.1-107.2 -79.0 165.8 9.2 59.8 16.3 31 31 A V H > S+ 0 0 0 32,-2.2 4,-2.3 29,-0.5 5,-0.2 0.910 125.1 54.1 -57.3 -40.6 8.7 56.8 14.1 32 32 A K H > S+ 0 0 79 29,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.919 106.3 51.3 -61.2 -42.3 9.8 59.0 11.2 33 33 A D H > S+ 0 0 60 28,-0.3 4,-2.5 2,-0.2 -1,-0.2 0.907 107.9 52.8 -57.9 -45.9 13.0 59.9 13.2 34 34 A L H X S+ 0 0 0 -4,-2.3 4,-2.6 2,-0.2 -1,-0.2 0.919 110.6 47.7 -57.1 -43.9 13.6 56.2 13.6 35 35 A I H X S+ 0 0 5 -4,-2.3 4,-2.7 2,-0.2 -2,-0.2 0.926 110.4 51.0 -63.0 -45.0 13.3 55.7 9.9 36 36 A K H X S+ 0 0 96 -4,-2.8 4,-2.0 1,-0.2 -1,-0.2 0.901 112.3 47.2 -57.8 -43.1 15.6 58.6 9.1 37 37 A R H X S+ 0 0 103 -4,-2.5 4,-2.3 2,-0.2 -2,-0.2 0.910 110.0 52.4 -67.8 -43.6 18.2 57.1 11.5 38 38 A Y H X S+ 0 0 0 -4,-2.6 4,-2.4 1,-0.2 5,-0.3 0.942 109.8 50.8 -51.9 -48.1 17.8 53.6 10.0 39 39 A C H X>S+ 0 0 1 -4,-2.7 5,-1.7 1,-0.2 4,-1.1 0.889 111.0 45.5 -64.3 -42.5 18.4 55.1 6.6 40 40 A T H <5S+ 0 0 90 -4,-2.0 -1,-0.2 3,-0.2 -2,-0.2 0.852 112.8 52.6 -69.4 -31.2 21.6 57.0 7.6 41 41 A E H <5S+ 0 0 112 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.887 119.7 32.2 -71.7 -38.2 22.9 54.0 9.4 42 42 A V H <5S- 0 0 19 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.488 110.3-121.7 -98.2 -3.0 22.5 51.6 6.5 43 43 A K T <5 + 0 0 177 -4,-1.1 2,-0.3 -5,-0.3 -3,-0.2 0.810 63.2 136.1 68.4 40.5 23.2 54.4 3.9 44 44 A I < - 0 0 56 -5,-1.7 2,-0.4 -6,-0.2 -1,-0.3 -0.760 62.4 -94.8-105.1 159.9 19.9 54.2 1.9 45 45 A S - 0 0 108 -2,-0.3 2,-0.2 1,-0.1 -5,-0.0 -0.573 35.9-124.3 -79.6 129.0 18.0 57.3 0.9 46 46 A F + 0 0 79 -2,-0.4 2,-0.3 -10,-0.1 -1,-0.1 -0.442 36.4 174.2 -67.1 138.7 15.2 58.4 3.2 47 47 A H > - 0 0 94 -2,-0.2 3,-1.7 1,-0.0 0, 0.0 -0.992 42.0-119.4-146.4 150.4 11.8 58.7 1.5 48 48 A E T 3 S+ 0 0 159 -2,-0.3 -2,-0.0 1,-0.3 -1,-0.0 0.650 108.2 62.5 -60.2 -23.6 8.3 59.5 2.7 49 49 A R T 3 S+ 0 0 188 31,-0.1 -1,-0.3 2,-0.1 2,-0.2 0.615 74.0 107.5 -85.9 -11.4 7.0 56.1 1.5 50 50 A I < - 0 0 13 -3,-1.7 2,-0.3 28,-0.0 30,-0.2 -0.517 53.0-172.9 -68.5 136.0 9.2 54.0 3.7 51 51 A R E -C 79 0A 114 28,-2.3 28,-3.0 -2,-0.2 2,-0.4 -0.927 21.7-137.6-129.1 154.8 7.0 52.5 6.4 52 52 A L E -C 78 0A 2 7,-0.4 7,-2.8 -2,-0.3 2,-0.4 -0.954 16.1-158.4-110.2 131.8 7.5 50.4 9.6 53 53 A E E -CD 77 58A 59 24,-2.6 24,-2.7 -2,-0.4 2,-0.5 -0.951 6.7-172.5-110.7 133.1 5.2 47.5 10.4 54 54 A F E > S- D 0 57A 11 3,-2.9 3,-1.6 -2,-0.4 22,-0.1 -0.995 73.1 -20.6-127.6 117.2 4.9 46.2 13.9 55 55 A E T 3 S- 0 0 131 -2,-0.5 -1,-0.1 20,-0.3 3,-0.1 0.874 129.8 -46.8 51.7 41.3 2.9 43.0 14.5 56 56 A G T 3 S+ 0 0 62 1,-0.2 2,-0.4 21,-0.0 -1,-0.3 0.657 119.7 106.0 87.8 1.8 1.1 43.4 11.3 57 57 A E E < S-D 54 0A 122 -3,-1.6 -3,-2.9 0, 0.0 2,-0.4 -0.960 70.9-117.3-126.3 139.2 0.3 47.1 11.7 58 58 A W E -D 53 0A 123 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.589 29.7-132.7 -73.3 129.4 1.7 50.3 10.2 59 59 A L - 0 0 23 -7,-2.8 -7,-0.4 -2,-0.4 -1,-0.1 -0.608 22.7-114.4 -79.3 138.7 3.3 52.6 12.7 60 60 A D > - 0 0 74 -2,-0.3 3,-1.9 1,-0.2 -29,-0.5 -0.591 18.4-145.2 -72.6 120.2 2.3 56.2 12.4 61 61 A P T 3 S+ 0 0 54 0, 0.0 -29,-2.5 0, 0.0 -28,-0.3 0.746 96.8 55.5 -59.1 -25.1 5.4 58.2 11.4 62 62 A N T 3 S+ 0 0 117 -31,-0.2 2,-0.3 -32,-0.1 -2,-0.1 0.516 87.1 97.3 -90.6 -3.0 4.3 61.2 13.5 63 63 A D S < S- 0 0 63 -3,-1.9 -32,-2.2 1,-0.1 -31,-0.2 -0.607 78.1-117.9 -82.3 140.6 3.9 59.2 16.8 64 64 A Q B >> -E 30 0B 73 -2,-0.3 3,-1.8 -34,-0.3 4,-0.7 -0.510 26.9-117.6 -63.0 146.1 6.7 59.3 19.3 65 65 A V G >4 S+ 0 0 1 -36,-3.1 3,-1.4 1,-0.3 5,-0.4 0.908 116.4 59.0 -54.7 -42.2 8.1 55.8 19.9 66 66 A Q G 34 S+ 0 0 114 -39,-2.7 -1,-0.3 -37,-0.3 -38,-0.1 0.743 100.3 56.4 -59.1 -23.7 7.0 56.1 23.5 67 67 A S G <4 S+ 0 0 76 -3,-1.8 -1,-0.3 -40,-0.3 -2,-0.2 0.594 99.9 71.5 -85.1 -17.5 3.4 56.6 22.3 68 68 A T S << S- 0 0 22 -3,-1.4 -9,-0.0 -4,-0.7 -4,-0.0 -0.296 98.0-105.8 -82.5 179.1 3.4 53.3 20.4 69 69 A E S S+ 0 0 142 -2,-0.1 -3,-0.1 -15,-0.1 -4,-0.1 0.356 74.5 131.1 -89.8 7.1 3.4 49.9 22.0 70 70 A L - 0 0 14 -5,-0.4 2,-0.3 4,-0.0 -2,-0.1 -0.325 33.7-177.1 -60.0 141.0 7.0 49.3 21.1 71 71 A E > - 0 0 130 -61,-0.1 3,-2.2 1,-0.1 -62,-0.1 -0.871 39.1 -63.8-132.8 167.3 9.2 48.0 24.0 72 72 A D T 3 S+ 0 0 87 -2,-0.3 -61,-0.2 1,-0.3 3,-0.1 -0.248 120.4 15.0 -54.4 133.9 12.8 47.2 24.4 73 73 A E T 3 S+ 0 0 116 -63,-3.0 -1,-0.3 1,-0.3 -62,-0.2 0.489 91.9 142.7 74.5 11.3 14.0 44.4 22.2 74 74 A D < - 0 0 38 -3,-2.2 -62,-2.3 -64,-0.5 2,-0.4 -0.302 42.2-135.0 -70.6 162.7 11.0 44.5 20.0 75 75 A Q E -b 12 0A 98 -64,-0.2 -20,-0.3 -3,-0.1 2,-0.3 -0.944 19.9-176.4-124.7 144.1 11.3 43.9 16.3 76 76 A V E -b 13 0A 2 -64,-2.6 -62,-2.8 -2,-0.4 2,-0.5 -0.921 22.7-122.6-133.4 159.0 9.8 45.8 13.4 77 77 A S E -bC 14 53A 48 -24,-2.7 -24,-2.6 -2,-0.3 2,-0.5 -0.906 15.9-143.6-104.2 130.9 9.7 45.3 9.6 78 78 A V E -bC 15 52A 5 -64,-3.1 -62,-0.6 -2,-0.5 2,-0.6 -0.860 14.4-165.3 -90.2 124.8 11.0 48.0 7.2 79 79 A V E C 0 51A 49 -28,-3.0 -28,-2.3 -2,-0.5 -64,-0.0 -0.953 360.0 360.0-115.2 115.8 8.9 48.2 4.0 80 80 A L 0 0 78 -2,-0.6 -1,-0.1 -30,-0.2 -31,-0.1 0.746 360.0 360.0 -89.1 360.0 10.5 50.3 1.3